Wall clock time and date at job start Tue Mar 9 2021 14:07:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86300 * 109.47122 * 2 1 4 4 C 1.50703 * 109.46800 * 240.00512 * 2 1 3 5 5 C 1.38262 * 119.94360 * 299.99179 * 4 2 1 6 6 C 1.38145 * 120.05938 * 180.02562 * 5 4 2 7 7 C 1.38731 * 119.93835 * 0.02562 * 6 5 4 8 8 O 1.35905 * 120.05264 * 180.02562 * 7 6 5 9 9 C 1.42905 * 116.99842 * 180.02562 * 8 7 6 10 10 C 1.53002 * 109.47079 * 180.02562 * 9 8 7 11 11 C 1.50696 * 109.46919 * 179.97438 * 10 9 8 12 12 O 1.21279 * 120.00077 * 359.97438 * 11 10 9 13 13 N 1.34777 * 119.99761 * 179.97438 * 11 10 9 14 14 C 1.46496 * 120.00266 * 179.97438 * 13 11 10 15 15 H 1.09004 * 112.84839 * 25.33717 * 14 13 11 16 16 C 1.53785 * 113.61813 * 156.53207 * 14 13 11 17 17 C 1.53776 * 87.07871 * 89.11750 * 16 14 13 18 18 H 1.08998 * 113.61911 * 270.88382 * 17 16 14 19 19 C 1.50709 * 113.61000 * 140.06831 * 17 16 14 20 20 C 1.38242 * 119.98845 * 299.72228 * 19 17 16 21 21 C 1.38219 * 120.00595 * 179.77141 * 20 19 17 22 22 C 1.38319 * 119.99171 * 0.50761 * 21 20 19 23 23 Br 1.89105 * 120.01060 * 179.77037 * 22 21 20 24 24 C 1.38326 * 119.97810 * 359.74613 * 22 21 20 25 25 C 1.38210 * 119.99119 * 359.97438 * 24 22 21 26 26 C 1.53777 * 113.61904 * 254.14085 * 14 13 11 27 27 C 1.38729 * 119.89194 * 0.27526 * 7 6 5 28 28 C 1.38146 * 119.94131 * 359.46928 * 27 7 6 29 29 H 0.96697 * 114.00426 * 59.99898 * 1 2 3 30 30 H 1.08994 * 109.47202 * 120.00394 * 2 1 3 31 31 H 1.48503 * 110.00033 * 298.68400 * 3 2 1 32 32 H 1.48506 * 109.99769 * 60.00166 * 3 2 1 33 33 H 1.08008 * 119.97547 * 359.97438 * 5 4 2 34 34 H 1.07990 * 120.03151 * 179.97438 * 6 5 4 35 35 H 1.09004 * 109.47054 * 299.99727 * 9 8 7 36 36 H 1.09000 * 109.47187 * 59.99782 * 9 8 7 37 37 H 1.09004 * 109.46930 * 299.99773 * 10 9 8 38 38 H 1.09004 * 109.47059 * 59.99375 * 10 9 8 39 39 H 0.96999 * 120.00043 * 0.02562 * 13 11 10 40 40 H 1.08997 * 113.61567 * 203.67090 * 16 14 13 41 41 H 1.08995 * 113.60962 * 334.57036 * 16 14 13 42 42 H 1.07997 * 119.99305 * 0.02562 * 20 19 17 43 43 H 1.08003 * 119.99837 * 180.23408 * 21 20 19 44 44 H 1.07999 * 120.00004 * 180.02562 * 24 22 21 45 45 H 1.08005 * 119.99702 * 179.97438 * 25 24 22 46 46 H 1.09004 * 113.61789 * 25.43212 * 26 14 13 47 47 H 1.09004 * 113.61533 * 156.33078 * 26 14 13 48 48 H 1.08000 * 120.03286 * 179.71870 * 27 7 6 49 49 H 1.08005 * 119.97222 * 180.23075 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 1.5966 -2.0341 -1.4482 6 6 2.0562 -2.6877 -2.5752 7 6 2.8545 -2.0147 -3.4886 8 8 3.3075 -2.6554 -4.5984 9 6 4.1252 -1.9005 -5.4949 10 6 4.5355 -2.7822 -6.6760 11 6 5.3973 -1.9860 -7.6217 12 8 5.6573 -0.8273 -7.3755 13 7 5.8791 -2.5616 -8.7411 14 6 6.7164 -1.7875 -9.6607 15 1 7.2341 -0.9634 -9.1699 16 6 7.6336 -2.6559 -10.5380 17 6 6.4789 -2.7122 -11.5521 18 1 5.7910 -3.5410 -11.3850 19 6 6.9295 -2.6057 -12.9863 20 6 7.6077 -1.4803 -13.4158 21 6 8.0252 -1.3843 -14.7299 22 6 7.7552 -2.4099 -15.6179 23 35 8.3205 -2.2763 -17.4175 24 6 7.0719 -3.5336 -15.1889 25 6 6.6599 -3.6312 -13.8733 26 6 5.9939 -1.3776 -10.9549 27 6 3.1940 -0.6884 -3.2648 28 6 2.7276 -0.0378 -2.1390 29 1 -0.3934 0.4417 -0.7650 30 1 1.7923 -0.5139 0.8899 31 1 1.5878 2.4586 -1.2242 32 1 1.5615 2.4678 1.2086 33 1 0.9761 -2.5579 -0.7361 34 1 1.7949 -3.7217 -2.7445 35 1 3.5645 -1.0406 -5.8614 36 1 5.0169 -1.5563 -4.9709 37 1 5.0960 -3.6424 -6.3098 38 1 3.6435 -3.1261 -7.1998 39 1 5.6708 -3.4883 -8.9382 40 1 8.5131 -2.1279 -10.9065 41 1 7.8735 -3.6226 -10.0955 42 1 7.8149 -0.6778 -12.7234 43 1 8.5584 -0.5066 -15.0644 44 1 6.8613 -4.3348 -15.8818 45 1 6.1260 -4.5083 -13.5383 46 1 4.9110 -1.3130 -10.8488 47 1 6.4259 -0.5007 -11.4372 48 1 3.8192 -0.1637 -3.9721 49 1 2.9885 0.9959 -1.9661 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:07:25 Heat of formation + Delta-G solvation = -19.993405 kcal Electronic energy + Delta-G solvation = -30721.240907 eV Core-core repulsion = 26241.239122 eV Total energy + Delta-G solvation = -4480.001786 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.077 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -41.67676 -41.26811 -40.44083 -39.26829 -38.79406 -37.29527 -34.75192 -33.47340 -32.85625 -32.05511 -31.99412 -31.41588 -30.29854 -26.85055 -26.69756 -26.07099 -25.23531 -23.93196 -23.51208 -22.42044 -22.20176 -21.53816 -20.13064 -19.54177 -18.48850 -18.17246 -17.56938 -17.45954 -17.17632 -16.89779 -16.49383 -16.35705 -16.23676 -16.09465 -15.96365 -15.63034 -15.18599 -15.08501 -14.73610 -14.60976 -14.49311 -14.42121 -14.30583 -14.20385 -14.06366 -13.49661 -13.44867 -13.41797 -12.95082 -12.86810 -12.76717 -12.40851 -12.29141 -12.06109 -12.04936 -11.86211 -11.77758 -11.61052 -11.41733 -11.29082 -11.21082 -11.05641 -10.60680 -10.11728 -10.03550 -10.00871 -9.51348 -9.21606 -4.93496 0.05081 0.28200 0.30925 0.31799 0.65144 1.31666 1.51859 1.58519 1.69997 1.94012 2.48169 2.56095 2.65515 3.42994 3.45627 3.56393 3.65237 3.68717 3.72498 3.82938 3.83268 3.89186 3.91543 3.94745 3.96860 4.03492 4.20719 4.26516 4.34991 4.35531 4.41629 4.45085 4.57248 4.64422 4.68150 4.70098 4.71266 4.78278 4.79557 4.86860 4.90779 4.98006 5.02367 5.05105 5.15171 5.18422 5.23373 5.24586 5.29053 5.49320 5.50388 5.65378 5.72365 5.83735 6.32401 6.47376 6.48982 7.17230 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.074 4.074 3 Si 0.758 3.242 4 C -0.159 4.159 5 C -0.059 4.059 6 C -0.158 4.158 7 C 0.124 3.876 8 O -0.321 6.321 9 C 0.072 3.928 10 C -0.133 4.133 11 C 0.522 3.478 12 O -0.582 6.582 13 N -0.698 5.698 14 C 0.115 3.885 15 H 0.086 0.914 16 C -0.124 4.124 17 C -0.067 4.067 18 H 0.118 0.882 19 C -0.056 4.056 20 C -0.115 4.115 21 C -0.100 4.100 22 C -0.111 4.111 23 Br -0.064 7.064 24 C -0.100 4.100 25 C -0.112 4.112 26 C -0.144 4.144 27 C -0.210 4.210 28 C -0.080 4.080 29 H 0.385 0.615 30 H 0.126 0.874 31 H -0.287 1.287 32 H -0.302 1.302 33 H 0.140 0.860 34 H 0.142 0.858 35 H 0.064 0.936 36 H 0.068 0.932 37 H 0.129 0.871 38 H 0.126 0.874 39 H 0.419 0.581 40 H 0.099 0.901 41 H 0.091 0.909 42 H 0.146 0.854 43 H 0.137 0.863 44 H 0.138 0.862 45 H 0.152 0.848 46 H 0.069 0.931 47 H 0.096 0.904 48 H 0.140 0.860 49 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.039 -4.337 -0.650 4.836 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.183 4.183 3 Si 0.664 3.336 4 C -0.160 4.160 5 C -0.077 4.077 6 C -0.177 4.177 7 C 0.078 3.922 8 O -0.235 6.235 9 C -0.004 4.004 10 C -0.172 4.172 11 C 0.310 3.690 12 O -0.462 6.462 13 N -0.350 5.350 14 C 0.010 3.990 15 H 0.104 0.896 16 C -0.162 4.162 17 C -0.085 4.085 18 H 0.136 0.864 19 C -0.057 4.057 20 C -0.134 4.134 21 C -0.120 4.120 22 C -0.190 4.190 23 Br 0.021 6.979 24 C -0.119 4.119 25 C -0.131 4.131 26 C -0.182 4.182 27 C -0.228 4.228 28 C -0.097 4.097 29 H 0.234 0.766 30 H 0.144 0.856 31 H -0.213 1.213 32 H -0.230 1.230 33 H 0.158 0.842 34 H 0.160 0.840 35 H 0.082 0.918 36 H 0.086 0.914 37 H 0.147 0.853 38 H 0.145 0.855 39 H 0.257 0.743 40 H 0.118 0.882 41 H 0.109 0.891 42 H 0.164 0.836 43 H 0.155 0.845 44 H 0.156 0.844 45 H 0.170 0.830 46 H 0.087 0.913 47 H 0.114 0.886 48 H 0.158 0.842 49 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 2.304 -3.162 -0.694 3.973 hybrid contribution -1.192 -0.120 -0.623 1.350 sum 1.112 -3.282 -1.317 3.707 Atomic orbital electron populations 1.86559 1.18614 1.80293 1.50177 1.25092 0.83304 1.11257 0.98664 0.94174 0.90599 0.72587 0.76268 1.20251 1.01975 0.95574 0.98153 1.20975 0.97032 0.93646 0.96058 1.20673 1.00926 1.01597 0.94500 1.19179 0.94476 0.91404 0.87103 1.85958 1.65214 1.40763 1.31568 1.22470 0.94139 0.94147 0.89616 1.21438 1.01936 0.99573 0.94253 1.20632 0.79596 0.86923 0.81853 1.90744 1.60417 1.19289 1.75744 1.45526 1.51418 1.16323 1.21727 1.21832 0.92492 0.95448 0.89270 0.89628 1.23360 0.96815 1.01312 0.94707 1.21714 0.98477 0.99329 0.89018 0.86429 1.20035 0.96142 0.93598 0.95911 1.21252 0.98230 0.98739 0.95134 1.21299 0.99282 0.97906 0.93482 1.21985 1.06008 0.99550 0.91457 1.96756 1.89637 1.98573 1.12905 1.21333 0.96763 0.96539 0.97308 1.21359 0.99928 0.99748 0.92070 1.23608 1.01183 0.97687 0.95741 1.21415 1.05926 0.94451 1.01057 1.20991 0.95864 0.99907 0.92976 0.76565 0.85599 1.21338 1.23005 0.84210 0.84009 0.91805 0.91401 0.85340 0.85550 0.74297 0.88223 0.89066 0.83634 0.84549 0.84376 0.83030 0.91262 0.88606 0.84228 0.83965 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.68 12.77 -148.98 -1.90 -3.58 16 2 C -0.07 -0.01 2.82 71.24 0.20 0.19 16 3 Si 0.76 -0.56 29.78 68.60 2.04 1.48 16 4 C -0.16 -0.18 5.39 -19.85 -0.11 -0.29 16 5 C -0.06 -0.09 9.60 22.25 0.21 0.12 16 6 C -0.16 -0.36 9.99 22.37 0.22 -0.13 16 7 C 0.12 0.41 6.69 22.51 0.15 0.56 16 8 O -0.32 -0.68 10.14 -92.49 -0.94 -1.61 16 9 C 0.07 -0.05 4.03 71.98 0.29 0.24 16 10 C -0.13 0.84 6.07 29.85 0.18 1.03 16 11 C 0.52 -0.93 7.83 87.66 0.69 -0.24 16 12 O -0.58 -4.42 15.60 -3.03 -0.05 -4.46 16 13 N -0.70 4.98 5.26 -440.05 -2.32 2.67 16 14 C 0.12 -0.62 4.29 45.52 0.20 -0.42 16 15 H 0.09 -0.05 7.50 -2.39 -0.02 -0.07 16 16 C -0.12 1.09 7.29 31.12 0.23 1.31 16 17 C -0.07 0.56 3.87 -10.92 -0.04 0.52 16 18 H 0.12 -1.35 8.09 -2.39 -0.02 -1.37 16 19 C -0.06 0.25 5.29 -19.86 -0.11 0.15 16 20 C -0.11 0.35 8.63 22.27 0.19 0.54 16 21 C -0.10 0.01 9.79 22.28 0.22 0.22 16 22 C -0.11 -0.19 6.22 22.31 0.14 -0.05 16 23 Br -0.06 -0.20 33.70 -20.37 -0.69 -0.88 16 24 C -0.10 0.06 9.79 22.28 0.22 0.27 16 25 C -0.11 0.42 9.71 22.26 0.22 0.64 16 26 C -0.14 0.83 7.27 31.21 0.23 1.06 16 27 C -0.21 -0.46 9.04 22.37 0.20 -0.25 16 28 C -0.08 -0.06 8.66 22.25 0.19 0.13 16 29 H 0.39 -0.83 8.70 -74.06 -0.64 -1.47 16 30 H 0.13 -0.22 7.96 -2.39 -0.02 -0.24 16 31 H -0.29 -1.00 7.11 99.48 0.71 -0.29 16 32 H -0.30 -2.05 7.11 99.48 0.71 -1.35 16 33 H 0.14 -0.04 8.06 -2.91 -0.02 -0.06 16 34 H 0.14 -0.04 8.06 -2.92 -0.02 -0.07 16 35 H 0.06 0.06 7.63 -2.38 -0.02 0.04 16 36 H 0.07 0.03 7.61 -2.39 -0.02 0.01 16 37 H 0.13 -1.31 8.14 -2.38 -0.02 -1.33 16 38 H 0.13 -1.25 8.14 -2.39 -0.02 -1.27 16 39 H 0.42 -5.62 8.70 -92.71 -0.81 -6.43 16 40 H 0.10 -0.81 7.73 -2.39 -0.02 -0.83 16 41 H 0.09 -0.96 8.14 -2.39 -0.02 -0.98 16 42 H 0.15 -0.92 6.65 -2.91 -0.02 -0.94 16 43 H 0.14 -0.23 8.06 -2.91 -0.02 -0.25 16 44 H 0.14 -0.34 8.06 -2.91 -0.02 -0.36 16 45 H 0.15 -1.29 8.05 -2.91 -0.02 -1.31 16 46 H 0.07 -0.27 8.14 -2.38 -0.02 -0.29 16 47 H 0.10 -0.54 6.31 -2.39 -0.02 -0.55 16 48 H 0.14 0.05 6.30 -2.91 -0.02 0.04 16 49 H 0.14 -0.40 4.87 -2.91 -0.01 -0.42 16 Total: 0.00 -20.06 424.65 -0.54 -20.60 By element: Atomic # 1 Polarization: -19.39 SS G_CDS: -0.41 Total: -19.80 kcal Atomic # 6 Polarization: 1.87 SS G_CDS: 3.72 Total: 5.59 kcal Atomic # 7 Polarization: 4.98 SS G_CDS: -2.32 Total: 2.67 kcal Atomic # 8 Polarization: -6.77 SS G_CDS: -2.89 Total: -9.66 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: 2.04 Total: 1.48 kcal Atomic # 35 Polarization: -0.20 SS G_CDS: -0.69 Total: -0.88 kcal Total: -20.06 -0.54 -20.60 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.603 kcal (2) G-P(sol) polarization free energy of solvation -20.060 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.456 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.537 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.597 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.993 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds