Wall clock time and date at job start Tue Mar 9 2021 14:08:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35898 * 117.00023 * 2 1 4 4 C 1.38616 * 120.02625 * 180.02562 * 3 2 1 5 5 C 1.38656 * 119.88679 * 180.30091 * 4 3 2 6 6 O 1.35904 * 120.02297 * 179.69487 * 5 4 3 7 7 C 1.42900 * 117.00140 * 0.02562 * 6 5 4 8 8 C 1.50694 * 109.47262 * 179.97438 * 7 6 5 9 9 O 1.21285 * 119.99594 * 0.02562 * 8 7 6 10 10 N 1.34770 * 120.00346 * 179.97438 * 8 7 6 11 11 C 1.46505 * 120.00262 * 180.02562 * 10 8 7 12 12 H 1.08995 * 112.84932 * 336.20207 * 11 10 8 13 13 C 1.53777 * 113.61245 * 107.50514 * 11 10 8 14 14 C 1.53788 * 87.08122 * 89.11617 * 13 11 10 15 15 H 1.08997 * 113.69249 * 270.87097 * 14 13 11 16 16 C 1.50700 * 113.61421 * 139.97977 * 14 13 11 17 17 C 1.38241 * 119.98833 * 322.23142 * 16 14 13 18 18 C 1.38219 * 120.01013 * 179.76965 * 17 16 14 19 19 C 1.38325 * 119.98761 * 0.50393 * 18 17 16 20 20 Br 1.89104 * 120.01187 * 179.76951 * 19 18 17 21 21 C 1.38330 * 119.97956 * 359.74368 * 19 18 17 22 22 C 1.38215 * 119.98861 * 0.02562 * 21 19 18 23 23 C 1.53777 * 113.61375 * 205.00201 * 11 10 8 24 24 C 1.38746 * 119.94590 * 359.44605 * 5 4 3 25 25 C 1.50705 * 119.97375 * 180.27993 * 24 5 4 26 26 O 1.42900 * 109.47309 * 75.27139 * 25 24 5 27 27 Si 1.86301 * 109.47349 * 195.27376 * 25 24 5 28 28 C 1.38193 * 120.05728 * 0.55004 * 24 5 4 29 29 C 1.38157 * 120.10557 * 359.72907 * 28 24 5 30 30 H 1.09002 * 109.47191 * 299.99582 * 1 2 3 31 31 H 1.09001 * 109.47001 * 59.99872 * 1 2 3 32 32 H 1.08998 * 109.47037 * 180.02562 * 1 2 3 33 33 H 1.08002 * 120.05254 * 0.02562 * 4 3 2 34 34 H 1.09004 * 109.47231 * 299.99964 * 7 6 5 35 35 H 1.09006 * 109.46942 * 59.99962 * 7 6 5 36 36 H 0.97005 * 119.99776 * 0.02562 * 10 8 7 37 37 H 1.08994 * 113.61548 * 203.66604 * 13 11 10 38 38 H 1.09007 * 113.61698 * 334.57145 * 13 11 10 39 39 H 1.07998 * 119.99762 * 0.02562 * 17 16 14 40 40 H 1.08004 * 120.00782 * 180.23504 * 18 17 16 41 41 H 1.08001 * 119.99977 * 180.02562 * 21 19 18 42 42 H 1.08002 * 119.99134 * 179.97438 * 22 21 19 43 43 H 1.08997 * 113.61913 * 25.43469 * 23 11 10 44 44 H 1.09005 * 113.61054 * 156.25572 * 23 11 10 45 45 H 1.08997 * 109.46616 * 315.27685 * 25 24 5 46 46 H 0.96694 * 114.00491 * 180.02562 * 26 25 24 47 47 H 1.48497 * 109.99936 * 178.67809 * 27 25 24 48 48 H 1.48500 * 109.99891 * 299.99774 * 27 25 24 49 49 H 1.08001 * 119.95032 * 179.70274 * 28 24 5 50 50 H 1.08003 * 119.97248 * 179.97438 * 29 28 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4302 1.2840 -0.0005 5 6 4.0567 2.5210 0.0058 6 8 5.4136 2.5959 0.0115 7 6 6.1316 1.3604 0.0101 8 6 7.6124 1.6399 0.0165 9 8 8.0134 2.7846 0.0221 10 7 8.4911 0.6181 0.0169 11 6 9.9307 0.8899 0.0236 12 1 10.1778 1.8727 -0.3776 13 6 10.6091 0.5835 1.3692 14 6 10.8273 -0.8455 0.8443 15 1 10.0022 -1.5232 1.0632 16 6 12.1711 -1.4232 1.2071 17 6 13.2934 -0.6160 1.2060 18 6 14.5253 -1.1443 1.5433 19 6 14.6368 -2.4833 1.8718 20 35 16.3230 -3.2083 2.3270 21 6 13.5144 -3.2918 1.8678 22 6 12.2821 -2.7615 1.5350 23 6 10.7754 -0.2488 -0.5720 24 6 3.2971 3.6821 0.0010 25 6 3.9774 5.0268 0.0015 26 8 4.5032 5.2952 -1.2999 27 14 2.7441 6.3466 0.4573 28 6 1.9173 3.6065 0.0014 29 6 1.2907 2.3752 0.0010 30 1 -0.3634 0.5138 0.8900 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3633 -1.0276 0.0005 33 1 4.0196 0.3791 -0.0014 34 1 5.8664 0.7850 0.8971 35 1 5.8735 0.7912 -0.8829 36 1 8.1704 -0.2974 0.0127 37 1 11.5349 1.1366 1.5274 38 1 9.9320 0.6368 2.2218 39 1 13.2069 0.4286 0.9456 40 1 15.4014 -0.5127 1.5461 41 1 13.6010 -4.3373 2.1246 42 1 11.4058 -3.3928 1.5315 43 1 10.2325 -0.8674 -1.2867 44 1 11.7461 0.0771 -0.9458 45 1 4.7902 5.0225 0.7278 46 1 4.9562 6.1462 -1.3733 47 1 3.4098 7.6735 0.4924 48 1 1.6309 6.3627 -0.5255 49 1 1.3277 4.5114 0.0026 50 1 0.2121 2.3187 0.0017 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10390340_4974312.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:08:31 Heat of formation + Delta-G solvation = -44.758882 kcal Electronic energy + Delta-G solvation = -34071.907406 eV Core-core repulsion = 29272.149517 eV Total energy + Delta-G solvation = -4799.757889 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 448.076 amu Computer time = 2.73 seconds Orbital eigenvalues (eV) -41.90218 -41.56585 -40.57290 -39.85177 -38.89692 -38.05381 -36.96923 -34.81946 -33.13193 -32.34716 -32.13499 -31.43767 -30.51323 -29.32998 -28.48233 -26.90773 -25.99966 -25.95724 -24.10374 -23.68757 -22.52449 -22.33377 -21.84552 -20.33159 -19.86577 -18.61661 -18.35501 -18.08049 -17.72671 -17.44911 -17.27545 -16.98837 -16.80983 -16.72184 -16.50944 -16.24605 -15.67026 -15.63687 -15.53620 -15.15088 -15.14717 -14.93857 -14.61453 -14.57019 -14.36365 -13.91788 -13.72555 -13.71101 -13.64552 -13.48530 -13.33999 -13.23157 -12.99347 -12.58971 -12.52594 -12.41940 -12.14059 -12.02300 -11.92909 -11.69222 -11.55901 -11.49283 -11.38576 -11.24070 -10.92680 -10.24920 -10.23585 -10.09045 -9.65824 -9.56550 -9.03932 -4.90017 -0.01318 0.23659 0.25734 0.37120 0.65490 1.37428 1.38452 1.44710 1.65255 2.00826 2.17226 2.47506 2.51589 2.59833 3.25508 3.41923 3.47251 3.54163 3.54250 3.68428 3.71103 3.77351 3.80944 3.83890 3.91311 3.97821 3.99377 4.02433 4.10087 4.17077 4.23271 4.30409 4.31606 4.38868 4.40506 4.46672 4.54559 4.55088 4.61894 4.67893 4.68716 4.73572 4.83679 4.89136 4.94502 5.05979 5.14306 5.15641 5.26443 5.34171 5.37074 5.48357 5.50305 5.72625 6.11343 6.27892 6.37221 6.66203 7.05549 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.247 4.247 5 C 0.191 3.809 6 O -0.274 6.274 7 C 0.037 3.963 8 C 0.520 3.480 9 O -0.508 6.508 10 N -0.711 5.711 11 C 0.122 3.878 12 H 0.108 0.892 13 C -0.144 4.144 14 C -0.076 4.076 15 H 0.101 0.899 16 C -0.056 4.056 17 C -0.111 4.111 18 C -0.087 4.087 19 C -0.094 4.094 20 Br -0.050 7.050 21 C -0.088 4.088 22 C -0.110 4.110 23 C -0.135 4.135 24 C -0.136 4.136 25 C -0.060 4.060 26 O -0.531 6.531 27 Si 0.682 3.318 28 C -0.037 4.037 29 C -0.238 4.238 30 H 0.060 0.940 31 H 0.059 0.941 32 H 0.103 0.897 33 H 0.138 0.862 34 H 0.097 0.903 35 H 0.096 0.904 36 H 0.403 0.597 37 H 0.097 0.903 38 H 0.077 0.923 39 H 0.133 0.867 40 H 0.133 0.867 41 H 0.133 0.867 42 H 0.131 0.869 43 H 0.079 0.921 44 H 0.100 0.900 45 H 0.076 0.924 46 H 0.377 0.623 47 H -0.261 1.261 48 H -0.256 1.256 49 H 0.138 0.862 50 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.791 -3.599 1.905 5.564 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.266 4.266 5 C 0.145 3.855 6 O -0.185 6.185 7 C -0.042 4.042 8 C 0.305 3.695 9 O -0.381 6.381 10 N -0.365 5.365 11 C 0.016 3.984 12 H 0.126 0.874 13 C -0.182 4.182 14 C -0.095 4.095 15 H 0.119 0.881 16 C -0.056 4.056 17 C -0.130 4.130 18 C -0.107 4.107 19 C -0.174 4.174 20 Br 0.035 6.965 21 C -0.108 4.108 22 C -0.129 4.129 23 C -0.173 4.173 24 C -0.137 4.137 25 C -0.170 4.170 26 O -0.338 6.338 27 Si 0.584 3.416 28 C -0.055 4.055 29 C -0.257 4.257 30 H 0.078 0.922 31 H 0.077 0.923 32 H 0.121 0.879 33 H 0.156 0.844 34 H 0.115 0.885 35 H 0.114 0.886 36 H 0.238 0.762 37 H 0.116 0.884 38 H 0.096 0.904 39 H 0.151 0.849 40 H 0.151 0.849 41 H 0.151 0.849 42 H 0.149 0.851 43 H 0.098 0.902 44 H 0.119 0.881 45 H 0.094 0.906 46 H 0.224 0.776 47 H -0.186 1.186 48 H -0.181 1.181 49 H 0.156 0.844 50 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -3.325 -2.882 1.712 4.721 hybrid contribution 0.133 -0.290 -0.871 0.927 sum -3.192 -3.171 0.842 4.578 Atomic orbital electron populations 1.23147 0.77618 1.04394 1.01809 1.86069 1.22012 1.26660 1.88038 1.18673 0.91443 0.84376 0.92733 1.20353 0.92933 0.97207 1.16126 1.18374 0.81857 0.92475 0.92828 1.86231 1.14849 1.29558 1.87871 1.22505 0.90109 0.87235 1.04336 1.20007 0.87323 0.85580 0.76589 1.90788 1.79715 1.20853 1.46725 1.45471 1.05632 1.09170 1.76239 1.21858 0.78989 1.00414 0.97108 0.87388 1.23584 1.01683 0.95068 0.97875 1.21661 0.94437 0.96495 0.96875 0.88117 1.19825 0.94850 0.93577 0.97388 1.21042 0.91513 1.00271 1.00174 1.21149 0.98556 0.93311 0.97685 1.21866 0.92156 0.96145 1.07217 1.96784 1.22476 1.85027 1.92206 1.21153 0.91358 0.99922 0.98349 1.21082 0.97312 0.94881 0.99621 1.23436 1.01065 0.96839 0.95916 1.18460 0.92263 0.92092 1.10884 1.24560 1.04002 1.00305 0.88143 1.86603 1.75830 1.41650 1.29738 0.95293 0.79685 0.77271 0.89353 1.20723 0.92555 0.97890 0.94327 1.21107 1.00469 0.91677 1.12473 0.92152 0.92282 0.87898 0.84380 0.88506 0.88567 0.76241 0.88425 0.90435 0.84931 0.84873 0.84918 0.85117 0.90221 0.88111 0.90583 0.77564 1.18623 1.18070 0.84448 0.84683 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.35 10.49 -19.42 -0.20 -0.55 16 3 C 0.17 0.28 6.68 -39.24 -0.26 0.02 16 4 C -0.25 -0.38 8.97 -39.29 -0.35 -0.73 16 5 C 0.19 0.56 6.66 -39.24 -0.26 0.30 16 6 O -0.27 -0.93 8.99 -39.35 -0.35 -1.28 16 7 C 0.04 -0.02 5.22 36.00 0.19 0.17 16 8 C 0.52 0.60 7.91 -10.99 -0.09 0.51 16 9 O -0.51 -3.06 16.10 -14.36 -0.23 -3.29 16 10 N -0.71 1.56 5.26 -53.02 -0.28 1.28 16 11 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 12 H 0.11 0.02 7.46 -51.93 -0.39 -0.37 16 13 C -0.14 0.33 7.25 -25.92 -0.19 0.14 16 14 C -0.08 0.24 3.86 -90.96 -0.35 -0.11 16 15 H 0.10 -0.43 8.09 -51.93 -0.42 -0.85 16 16 C -0.06 0.08 5.29 -104.62 -0.55 -0.47 16 17 C -0.11 0.12 8.60 -39.59 -0.34 -0.22 16 18 C -0.09 0.00 9.79 -39.56 -0.39 -0.39 16 19 C -0.09 -0.07 6.22 -39.52 -0.25 -0.32 16 20 Br -0.05 -0.06 33.70 -68.01 -2.29 -2.36 16 21 C -0.09 0.01 9.79 -39.56 -0.39 -0.38 16 22 C -0.11 0.13 9.71 -39.59 -0.38 -0.26 16 23 C -0.13 0.44 7.29 -25.92 -0.19 0.25 16 24 C -0.14 -0.39 5.31 -104.45 -0.55 -0.95 16 25 C -0.06 -0.14 2.37 36.01 0.09 -0.06 16 26 O -0.53 -2.09 12.86 -35.23 -0.45 -2.55 16 27 Si 0.68 0.20 30.19 -169.99 -5.13 -4.93 16 28 C -0.04 -0.05 8.65 -39.63 -0.34 -0.39 16 29 C -0.24 -0.19 9.04 -39.41 -0.36 -0.54 16 30 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 31 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 32 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 33 H 0.14 -0.10 6.30 -52.49 -0.33 -0.43 16 34 H 0.10 -0.31 7.66 -51.93 -0.40 -0.71 16 35 H 0.10 -0.25 7.66 -51.93 -0.40 -0.65 16 36 H 0.40 -2.11 8.70 -40.82 -0.36 -2.47 16 37 H 0.10 -0.24 6.32 -51.93 -0.33 -0.57 16 38 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.13 -0.36 6.67 -52.49 -0.35 -0.71 16 40 H 0.13 -0.14 8.06 -52.48 -0.42 -0.56 16 41 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 42 H 0.13 -0.40 8.05 -52.49 -0.42 -0.82 16 43 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 44 H 0.10 -0.32 7.72 -51.93 -0.40 -0.72 16 45 H 0.08 0.17 7.82 -51.93 -0.41 -0.23 16 46 H 0.38 0.07 8.74 45.56 0.40 0.47 16 47 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 48 H -0.26 -0.63 6.75 56.52 0.38 -0.25 16 49 H 0.14 -0.03 4.89 -52.49 -0.26 -0.29 16 50 H 0.14 -0.20 6.29 -52.48 -0.33 -0.53 16 LS Contribution 432.43 15.07 6.52 6.52 Total: 0.00 -10.66 432.43 -13.21 -23.87 By element: Atomic # 1 Polarization: -7.20 SS G_CDS: -6.51 Total: -13.71 kcal Atomic # 6 Polarization: 1.26 SS G_CDS: -4.27 Total: -3.00 kcal Atomic # 7 Polarization: 1.56 SS G_CDS: -0.28 Total: 1.28 kcal Atomic # 8 Polarization: -6.43 SS G_CDS: -1.24 Total: -7.67 kcal Atomic # 14 Polarization: 0.20 SS G_CDS: -5.13 Total: -4.93 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 6.52 Total: 6.52 kcal Total: -10.66 -13.21 -23.87 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_4974312.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.887 kcal (2) G-P(sol) polarization free energy of solvation -10.662 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.549 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.872 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.759 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.73 seconds