Wall clock time and date at job start Tue Mar 9 2021 14:11:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53000 * 109.46958 * 2 1 4 4 H 1.08996 * 109.47363 * 304.99930 * 3 2 1 5 5 C 1.53006 * 109.47217 * 65.00291 * 3 2 1 6 6 C 1.52992 * 109.47127 * 179.97438 * 5 3 2 7 7 C 1.52998 * 109.47207 * 299.99621 * 6 5 3 8 8 H 1.08996 * 109.47145 * 300.00207 * 7 6 5 9 9 N 1.46504 * 109.47288 * 180.02562 * 7 6 5 10 10 C 1.34774 * 120.00045 * 85.00095 * 9 7 6 11 11 O 1.21283 * 119.99805 * 4.86611 * 10 9 7 12 12 C 1.50697 * 119.99958 * 184.86963 * 10 9 7 13 13 C 1.53042 * 109.33066 * 215.87832 * 12 10 9 14 14 C 1.53539 * 108.56355 * 190.34005 * 13 12 10 15 15 N 1.47029 * 107.65774 * 60.94706 * 14 13 12 16 16 C 1.38924 * 118.88703 * 316.33776 * 15 14 13 17 17 C 1.31114 * 121.84402 * 13.31256 * 16 15 14 18 18 C 1.50708 * 118.54486 * 179.61935 * 17 16 15 19 19 O 1.42895 * 109.47164 * 109.59004 * 18 17 16 20 20 Si 1.86301 * 109.46736 * 349.59349 * 18 17 16 21 21 C 1.52999 * 109.47006 * 60.00031 * 7 6 5 22 22 C 1.52995 * 109.47355 * 300.00310 * 21 7 6 23 23 H 1.09004 * 109.47423 * 300.00163 * 1 2 3 24 24 H 1.09004 * 109.46882 * 59.99917 * 1 2 3 25 25 H 1.09000 * 109.47097 * 179.97438 * 1 2 3 26 26 H 1.08993 * 109.46994 * 240.00057 * 2 1 3 27 27 H 1.09004 * 109.46882 * 120.00083 * 2 1 3 28 28 H 1.09002 * 109.46411 * 299.99651 * 5 3 2 29 29 H 1.08996 * 109.47249 * 59.99568 * 5 3 2 30 30 H 1.09000 * 109.46949 * 179.97438 * 6 5 3 31 31 H 1.09002 * 109.47581 * 60.00035 * 6 5 3 32 32 H 0.97003 * 119.99943 * 265.00407 * 9 7 6 33 33 H 1.08998 * 109.32876 * 335.52835 * 12 10 9 34 34 H 1.09005 * 109.61620 * 310.06367 * 13 12 10 35 35 H 1.09000 * 109.62022 * 70.61221 * 13 12 10 36 36 H 1.09001 * 109.82136 * 180.48511 * 14 13 12 37 37 H 1.09002 * 109.81911 * 301.40710 * 14 13 12 38 38 H 0.97003 * 120.55346 * 136.31497 * 15 14 13 39 39 H 1.07999 * 119.07995 * 193.31651 * 16 15 14 40 40 H 1.08990 * 109.47153 * 229.59234 * 18 17 16 41 41 H 0.96703 * 114.00087 * 180.02562 * 19 18 17 42 42 H 1.48496 * 109.99890 * 298.67671 * 20 18 17 43 43 H 1.48498 * 110.00511 * 60.00042 * 20 18 17 44 44 H 1.09005 * 109.47527 * 60.00365 * 21 7 6 45 45 H 1.09007 * 109.47226 * 179.97438 * 21 7 6 46 46 H 1.09005 * 109.47553 * 180.02562 * 22 21 7 47 47 H 1.09010 * 109.46930 * 299.99729 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9816 -0.8418 5 6 1.6352 2.1266 1.3074 6 6 2.1457 3.5688 1.3077 7 6 3.6706 3.5701 1.1823 8 1 4.1048 3.0308 2.0241 9 7 4.1595 4.9512 1.1831 10 6 4.3841 5.5858 2.3507 11 8 4.2666 4.9869 3.3988 12 6 4.7813 7.0395 2.3539 13 6 5.7777 7.2899 3.4882 14 6 5.9709 8.8052 3.6433 15 7 4.6649 9.3889 3.9831 16 6 3.5381 8.9599 3.2930 17 6 3.5547 7.8860 2.5409 18 6 2.2870 7.4835 1.8322 19 8 2.4346 7.7066 0.4285 20 14 0.8656 8.5010 2.4765 21 6 4.0753 2.8861 -0.1251 22 6 3.5648 1.4438 -0.1254 23 1 -0.3634 0.5139 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 1.8933 -0.5138 -0.8899 27 1 1.8933 -0.5139 0.8900 28 1 0.5489 2.1252 1.3969 29 1 2.0698 1.5875 2.1492 30 1 1.8570 4.0562 2.2389 31 1 1.7115 4.1082 0.4659 32 1 4.3215 5.4089 0.3433 33 1 5.2492 7.2877 1.4013 34 1 5.3872 6.8737 4.4169 35 1 6.7321 6.8220 3.2469 36 1 6.6849 9.0069 4.4419 37 1 6.3330 9.2294 2.7068 38 1 4.5913 10.0619 4.6777 39 1 2.6228 9.5268 3.3784 40 1 2.0892 6.4271 2.0134 41 1 1.6547 7.4693 -0.0916 42 1 0.6814 8.2537 3.9291 43 1 1.1231 9.9435 2.2355 44 1 3.6411 3.4254 -0.9670 45 1 5.1617 2.8874 -0.2147 46 1 3.8535 0.9563 -1.0566 47 1 3.9991 0.9045 0.7165 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466078_15608500.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:11:43 Heat of formation + Delta-G solvation = -70.528616 kcal Electronic energy + Delta-G solvation = -25626.766317 eV Core-core repulsion = 22195.929049 eV Total energy + Delta-G solvation = -3430.837268 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.193 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -41.45505 -40.06208 -38.83375 -37.47173 -35.93166 -33.78581 -32.98075 -32.89702 -31.74910 -29.29513 -27.13948 -25.95557 -24.44219 -23.59479 -23.13033 -21.77066 -21.35958 -20.74998 -19.11849 -18.78417 -18.31428 -17.72913 -17.19313 -16.74626 -16.05562 -15.66147 -15.56204 -15.13767 -15.02169 -14.86772 -14.69859 -14.56142 -14.30647 -14.30226 -13.92831 -13.78544 -13.62334 -13.54729 -13.20648 -12.81891 -12.71474 -12.50458 -12.28998 -12.22384 -12.08071 -11.87345 -11.66116 -11.60741 -11.46822 -11.40912 -11.21295 -10.99960 -10.48804 -10.13974 -9.82267 -8.51465 -4.94570 1.22711 1.34833 1.66105 1.87818 1.98045 2.36722 2.50617 3.53449 3.64185 3.68722 3.70413 3.80185 3.86181 4.00973 4.07513 4.15200 4.19186 4.30464 4.36166 4.37948 4.42235 4.47625 4.52080 4.54007 4.55597 4.60937 4.68318 4.71793 4.75607 4.78930 4.83581 5.02749 5.06460 5.11696 5.15254 5.16907 5.18354 5.27291 5.27865 5.28519 5.34712 5.40953 5.48393 5.56878 5.70190 6.23672 6.68967 6.70907 6.76622 7.45170 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.121 4.121 3 C -0.089 4.089 4 H 0.071 0.929 5 C -0.113 4.113 6 C -0.128 4.128 7 C 0.144 3.856 8 H 0.086 0.914 9 N -0.724 5.724 10 C 0.530 3.470 11 O -0.540 6.540 12 C -0.036 4.036 13 C -0.128 4.128 14 C 0.122 3.878 15 N -0.748 5.748 16 C 0.146 3.854 17 C -0.223 4.223 18 C -0.049 4.049 19 O -0.548 6.548 20 Si 0.666 3.334 21 C -0.125 4.125 22 C -0.111 4.111 23 H 0.057 0.943 24 H 0.053 0.947 25 H 0.052 0.948 26 H 0.061 0.939 27 H 0.061 0.939 28 H 0.068 0.932 29 H 0.063 0.937 30 H 0.065 0.935 31 H 0.065 0.935 32 H 0.402 0.598 33 H 0.090 0.910 34 H 0.085 0.915 35 H 0.078 0.922 36 H 0.084 0.916 37 H 0.063 0.937 38 H 0.403 0.597 39 H 0.125 0.875 40 H 0.064 0.936 41 H 0.375 0.625 42 H -0.257 1.257 43 H -0.252 1.252 44 H 0.068 0.932 45 H 0.067 0.933 46 H 0.067 0.933 47 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.132 0.547 -3.399 3.624 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.158 4.158 3 C -0.107 4.107 4 H 0.090 0.910 5 C -0.151 4.151 6 C -0.166 4.166 7 C 0.040 3.960 8 H 0.104 0.896 9 N -0.375 5.375 10 C 0.316 3.684 11 O -0.417 6.417 12 C -0.057 4.057 13 C -0.167 4.167 14 C -0.002 4.002 15 N -0.379 5.379 16 C 0.024 3.976 17 C -0.234 4.234 18 C -0.161 4.161 19 O -0.353 6.353 20 Si 0.568 3.432 21 C -0.163 4.163 22 C -0.149 4.149 23 H 0.076 0.924 24 H 0.072 0.928 25 H 0.072 0.928 26 H 0.080 0.920 27 H 0.080 0.920 28 H 0.087 0.913 29 H 0.082 0.918 30 H 0.083 0.917 31 H 0.084 0.916 32 H 0.237 0.763 33 H 0.108 0.892 34 H 0.104 0.896 35 H 0.097 0.903 36 H 0.102 0.898 37 H 0.081 0.919 38 H 0.237 0.763 39 H 0.142 0.858 40 H 0.082 0.918 41 H 0.221 0.779 42 H -0.181 1.181 43 H -0.178 1.178 44 H 0.087 0.913 45 H 0.086 0.914 46 H 0.086 0.914 47 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -0.756 0.888 -1.928 2.253 hybrid contribution 0.484 0.297 -0.110 0.578 sum -0.272 1.185 -2.038 2.373 Atomic orbital electron populations 1.21828 0.95803 1.01664 1.01933 1.21571 0.96031 0.96198 1.02032 1.21229 0.95209 0.96064 0.98199 0.91038 1.21602 1.01009 0.94962 0.97529 1.21922 0.95109 0.97328 1.02277 1.20986 0.94111 0.82018 0.98929 0.89586 1.46148 1.67930 1.14624 1.08794 1.20443 0.75947 0.88449 0.83576 1.90690 1.51658 1.67728 1.31603 1.19634 0.94708 0.90884 1.00489 1.21847 0.98968 0.96317 0.99559 1.21620 0.84705 0.92801 1.01094 1.44507 1.05091 1.46228 1.42028 1.20257 0.90285 0.93595 0.93439 1.19529 0.95558 0.99009 1.09265 1.24454 1.01912 1.04570 0.85119 1.86489 1.42925 1.89027 1.16836 0.95451 0.85413 0.79720 0.82572 1.21788 1.01215 0.96488 0.96816 1.21541 0.95398 0.95636 1.02371 0.92438 0.92768 0.92842 0.92007 0.91985 0.91329 0.91812 0.91663 0.91640 0.76301 0.89236 0.89624 0.90294 0.89783 0.91889 0.76284 0.85841 0.91796 0.77869 1.18133 1.17778 0.91286 0.91390 0.91425 0.91673 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.14 9.67 37.16 0.36 0.50 16 2 C -0.12 0.11 5.40 -26.73 -0.14 -0.03 16 3 C -0.09 0.10 2.19 -90.62 -0.20 -0.10 16 4 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 5 C -0.11 0.05 4.96 -26.73 -0.13 -0.08 16 6 C -0.13 0.00 5.49 -26.74 -0.15 -0.15 16 7 C 0.14 0.06 2.49 -67.93 -0.17 -0.11 16 8 H 0.09 0.25 7.51 -51.93 -0.39 -0.14 16 9 N -0.72 -0.41 5.00 -53.81 -0.27 -0.68 16 10 C 0.53 1.72 5.24 -10.99 -0.06 1.66 16 11 O -0.54 -3.83 15.71 5.55 0.09 -3.75 16 12 C -0.04 -0.07 2.71 -93.14 -0.25 -0.32 16 13 C -0.13 -0.18 5.31 -26.43 -0.14 -0.32 16 14 C 0.12 -0.03 7.16 -3.47 -0.02 -0.05 16 15 N -0.75 -0.53 5.83 -60.68 -0.35 -0.89 16 16 C 0.15 0.34 9.61 -16.08 -0.15 0.19 16 17 C -0.22 -0.57 5.06 -101.33 -0.51 -1.08 16 18 C -0.05 -0.04 2.41 36.01 0.09 0.05 16 19 O -0.55 0.19 12.86 -35.23 -0.45 -0.26 16 20 Si 0.67 -0.01 29.93 -169.99 -5.09 -5.10 16 21 C -0.13 0.16 5.39 -26.73 -0.14 0.01 16 22 C -0.11 0.13 5.20 -26.73 -0.14 -0.01 16 23 H 0.06 -0.05 6.57 -51.93 -0.34 -0.39 16 24 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 25 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 26 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 28 H 0.07 -0.05 6.56 -51.93 -0.34 -0.39 16 29 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 30 H 0.06 0.13 8.12 -51.93 -0.42 -0.29 16 31 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 32 H 0.40 -0.43 8.56 -40.82 -0.35 -0.78 16 33 H 0.09 0.09 8.08 -51.93 -0.42 -0.33 16 34 H 0.09 0.32 7.50 -51.93 -0.39 -0.07 16 35 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 36 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 38 H 0.40 -0.50 8.96 -40.82 -0.37 -0.86 16 39 H 0.12 0.25 4.34 -52.49 -0.23 0.02 16 40 H 0.06 0.08 6.75 -51.93 -0.35 -0.27 16 41 H 0.37 -1.71 8.74 45.56 0.40 -1.31 16 42 H -0.26 -0.79 7.11 56.52 0.40 -0.39 16 43 H -0.25 -0.59 6.87 56.52 0.39 -0.20 16 44 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 45 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 46 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 47 H 0.06 -0.03 8.14 -51.92 -0.42 -0.46 16 LS Contribution 357.28 15.07 5.38 5.38 Total: 0.00 -6.49 357.28 -10.79 -17.28 By element: Atomic # 1 Polarization: -3.82 SS G_CDS: -8.33 Total: -12.14 kcal Atomic # 6 Polarization: 1.93 SS G_CDS: -1.77 Total: 0.16 kcal Atomic # 7 Polarization: -0.95 SS G_CDS: -0.62 Total: -1.57 kcal Atomic # 8 Polarization: -3.64 SS G_CDS: -0.37 Total: -4.01 kcal Atomic # 14 Polarization: -0.01 SS G_CDS: -5.09 Total: -5.10 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -6.49 -10.79 -17.28 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_15608500.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.252 kcal (2) G-P(sol) polarization free energy of solvation -6.485 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.738 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.791 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.276 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.529 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds