Wall clock time and date at job start Tue Mar 9 2021 14:11:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52998 * 109.47115 * 2 1 4 4 H 1.08994 * 109.46965 * 304.99974 * 3 2 1 5 5 C 1.52998 * 109.47164 * 64.99776 * 3 2 1 6 6 C 1.52998 * 109.47164 * 179.97438 * 5 3 2 7 7 C 1.53008 * 109.47363 * 300.00049 * 6 5 3 8 8 H 1.09001 * 109.46796 * 300.00526 * 7 6 5 9 9 N 1.46497 * 109.47335 * 179.97438 * 7 6 5 10 10 C 1.34777 * 119.99525 * 84.99977 * 9 7 6 11 11 O 1.21283 * 120.00463 * 0.02562 * 10 9 7 12 12 C 1.50700 * 119.99675 * 179.72583 * 10 9 7 13 13 C 1.53004 * 109.47208 * 180.27843 * 12 10 9 14 14 O 1.42902 * 109.47178 * 179.97438 * 13 12 10 15 15 C 1.35899 * 116.99732 * 180.02562 * 14 13 12 16 16 C 1.38712 * 120.05490 * 179.72630 * 15 14 13 17 17 C 1.38163 * 119.94553 * 179.76384 * 16 15 14 18 18 C 1.50699 * 119.97418 * 180.23315 * 17 16 15 19 19 O 1.42901 * 109.46840 * 300.25245 * 18 17 16 20 20 Si 1.86304 * 109.47125 * 180.25463 * 18 17 16 21 21 C 1.38251 * 120.05256 * 0.48541 * 17 16 15 22 22 C 1.38284 * 120.11341 * 359.76946 * 21 17 16 23 23 C 1.38128 * 120.05421 * 359.97438 * 22 21 17 24 24 C 1.53001 * 109.46508 * 59.99812 * 7 6 5 25 25 C 1.52998 * 109.47617 * 299.99766 * 24 7 6 26 26 H 1.09003 * 109.46985 * 180.02562 * 1 2 3 27 27 H 1.09000 * 109.47015 * 299.99944 * 1 2 3 28 28 H 1.08993 * 109.47002 * 60.00183 * 1 2 3 29 29 H 1.09004 * 109.47454 * 239.99894 * 2 1 3 30 30 H 1.09006 * 109.47180 * 119.99968 * 2 1 3 31 31 H 1.08994 * 109.47717 * 300.00398 * 5 3 2 32 32 H 1.09008 * 109.46859 * 60.00293 * 5 3 2 33 33 H 1.08998 * 109.47238 * 180.02562 * 6 5 3 34 34 H 1.08994 * 109.46965 * 60.00198 * 6 5 3 35 35 H 0.97000 * 120.00580 * 265.00723 * 9 7 6 36 36 H 1.09009 * 109.47352 * 300.27556 * 12 10 9 37 37 H 1.08998 * 109.47585 * 60.27844 * 12 10 9 38 38 H 1.09000 * 109.46887 * 300.00372 * 13 12 10 39 39 H 1.08998 * 109.46846 * 59.99549 * 13 12 10 40 40 H 1.07997 * 120.02612 * 359.97438 * 16 15 14 41 41 H 1.08995 * 109.47237 * 60.25362 * 18 17 16 42 42 H 0.96701 * 113.99803 * 179.97438 * 19 18 17 43 43 H 1.48496 * 110.00040 * 60.00047 * 20 18 17 44 44 H 1.48499 * 109.99916 * 181.31736 * 20 18 17 45 45 H 1.08007 * 119.93950 * 179.74112 * 21 17 16 46 46 H 1.07997 * 119.97177 * 179.97438 * 22 21 17 47 47 H 1.07996 * 120.02242 * 179.97438 * 23 22 21 48 48 H 1.09002 * 109.47394 * 60.00470 * 24 7 6 49 49 H 1.09006 * 109.46800 * 179.97438 * 24 7 6 50 50 H 1.08998 * 109.47394 * 180.02562 * 25 24 7 51 51 H 1.09002 * 109.47313 * 300.00753 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9815 -0.8418 5 6 1.6352 2.1265 1.3073 6 6 2.1457 3.5688 1.3076 7 6 3.6706 3.5702 1.1822 8 1 4.1048 3.0308 2.0240 9 7 4.1594 4.9512 1.1818 10 6 4.3840 5.5867 2.3489 11 8 4.1818 5.0153 3.3994 12 6 4.8927 7.0053 2.3486 13 6 5.0678 7.4846 3.7910 14 8 5.5508 8.8296 3.7907 15 6 5.7621 9.4094 5.0015 16 6 6.2358 10.7111 5.0752 17 6 6.4452 11.3001 6.3073 18 6 6.9548 12.7160 6.3881 19 8 8.2245 12.8030 5.7381 20 14 7.1370 13.2094 8.1753 21 6 6.1926 10.5898 7.4662 22 6 5.7254 9.2902 7.3954 23 6 5.5094 8.6987 6.1660 24 6 4.0753 2.8860 -0.1252 25 6 3.5649 1.4437 -0.1254 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8899 29 1 1.8934 -0.5139 -0.8900 30 1 1.8933 -0.5139 0.8900 31 1 0.5489 2.1252 1.3970 32 1 2.0699 1.5875 2.1492 33 1 1.8577 4.0560 2.2391 34 1 1.7115 4.1081 0.4658 35 1 4.3214 5.4082 0.3417 36 1 5.8521 7.0472 1.8328 37 1 4.1766 7.6481 1.8366 38 1 4.1085 7.4427 4.3068 39 1 5.7839 6.8419 4.3030 40 1 6.4375 11.2648 4.1702 41 1 6.2485 13.3850 5.8966 42 1 8.6132 13.6884 5.7512 43 1 8.0976 12.3049 8.8566 44 1 7.6086 14.6145 8.2688 45 1 6.3610 11.0506 8.4284 46 1 5.5292 8.7373 8.3021 47 1 5.1448 7.6836 6.1114 48 1 3.6411 3.4253 -0.9670 49 1 5.1617 2.8874 -0.2147 50 1 3.8536 0.9563 -1.0566 51 1 3.9991 0.9044 0.7165 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466078_4549614.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:11:57 Heat of formation + Delta-G solvation = -102.095928 kcal Electronic energy + Delta-G solvation = -27966.167387 eV Core-core repulsion = 24024.252696 eV Total energy + Delta-G solvation = -3941.914691 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.198 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -41.47393 -41.05187 -39.61903 -39.02363 -37.46290 -36.15333 -33.82351 -32.96602 -32.61275 -31.77600 -30.88993 -29.19589 -27.04443 -25.61837 -24.31531 -23.67798 -23.58973 -22.00586 -21.64616 -21.40056 -20.69126 -19.17868 -18.57438 -17.90897 -17.58748 -17.49705 -17.21412 -16.90694 -16.25758 -15.92787 -15.77974 -15.65062 -15.58245 -15.06386 -14.84120 -14.57038 -14.49817 -14.39006 -14.30572 -14.04790 -13.95343 -13.75822 -13.46719 -13.20031 -12.99512 -12.93937 -12.76325 -12.50951 -12.36617 -12.32518 -12.09803 -12.03184 -11.83314 -11.69739 -11.67800 -11.46271 -11.29413 -11.06692 -10.90781 -10.57832 -10.10288 -9.91291 -9.29043 -4.91465 0.17856 0.37440 1.28043 1.50724 1.60836 1.69763 1.95665 2.47264 2.61191 3.35455 3.53211 3.64418 3.69224 3.74202 3.82309 3.84001 3.86915 3.99267 4.06472 4.09088 4.15316 4.22065 4.24488 4.32662 4.35382 4.38573 4.47095 4.47651 4.52978 4.53211 4.61416 4.65085 4.69837 4.74376 4.75739 4.82751 4.96188 5.01225 5.06726 5.12414 5.14363 5.17986 5.23133 5.24398 5.28535 5.31916 5.36018 5.43596 5.44791 5.51772 5.58267 5.67510 6.30658 6.46328 6.57919 7.15275 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.120 4.120 3 C -0.085 4.085 4 H 0.076 0.924 5 C -0.111 4.111 6 C -0.124 4.124 7 C 0.146 3.854 8 H 0.063 0.937 9 N -0.713 5.713 10 C 0.519 3.481 11 O -0.583 6.583 12 C -0.133 4.133 13 C 0.074 3.926 14 O -0.323 6.323 15 C 0.116 3.884 16 C -0.141 4.141 17 C -0.048 4.048 18 C -0.090 4.090 19 O -0.559 6.559 20 Si 0.772 3.228 21 C -0.159 4.159 22 C -0.075 4.075 23 C -0.212 4.212 24 C -0.119 4.119 25 C -0.111 4.111 26 H 0.052 0.948 27 H 0.054 0.946 28 H 0.056 0.944 29 H 0.066 0.934 30 H 0.056 0.944 31 H 0.068 0.932 32 H 0.053 0.947 33 H 0.044 0.956 34 H 0.075 0.925 35 H 0.418 0.582 36 H 0.125 0.875 37 H 0.127 0.873 38 H 0.067 0.933 39 H 0.062 0.938 40 H 0.129 0.871 41 H 0.097 0.903 42 H 0.396 0.604 43 H -0.299 1.299 44 H -0.283 1.283 45 H 0.147 0.853 46 H 0.155 0.845 47 H 0.138 0.862 48 H 0.084 0.916 49 H 0.074 0.926 50 H 0.078 0.922 51 H 0.057 0.943 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.695 0.929 -3.578 4.575 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.158 4.158 3 C -0.103 4.103 4 H 0.095 0.905 5 C -0.149 4.149 6 C -0.162 4.162 7 C 0.041 3.959 8 H 0.081 0.919 9 N -0.364 5.364 10 C 0.307 3.693 11 O -0.464 6.464 12 C -0.172 4.172 13 C -0.001 4.001 14 O -0.238 6.238 15 C 0.071 3.929 16 C -0.160 4.160 17 C -0.048 4.048 18 C -0.198 4.198 19 O -0.369 6.369 20 Si 0.676 3.324 21 C -0.176 4.176 22 C -0.093 4.093 23 C -0.231 4.231 24 C -0.156 4.156 25 C -0.149 4.149 26 H 0.071 0.929 27 H 0.073 0.927 28 H 0.075 0.925 29 H 0.085 0.915 30 H 0.075 0.925 31 H 0.087 0.913 32 H 0.071 0.929 33 H 0.063 0.937 34 H 0.093 0.907 35 H 0.255 0.745 36 H 0.143 0.857 37 H 0.145 0.855 38 H 0.085 0.915 39 H 0.081 0.919 40 H 0.147 0.853 41 H 0.115 0.885 42 H 0.246 0.754 43 H -0.227 1.227 44 H -0.210 1.210 45 H 0.164 0.836 46 H 0.173 0.827 47 H 0.156 0.844 48 H 0.102 0.898 49 H 0.093 0.907 50 H 0.096 0.904 51 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges -2.388 0.239 -2.540 3.494 hybrid contribution 0.908 0.377 -0.873 1.315 sum -1.480 0.615 -3.413 3.771 Atomic orbital electron populations 1.21831 0.95907 1.01657 1.01912 1.21565 0.95945 0.96245 1.02021 1.21195 0.95508 0.95926 0.97662 0.90517 1.21571 1.00982 0.94563 0.97779 1.21855 0.95065 0.97651 1.01660 1.20985 0.93977 0.81600 0.99311 0.91875 1.45969 1.66816 1.14865 1.08781 1.20628 0.76556 0.88456 0.83702 1.90733 1.53825 1.69004 1.32803 1.21441 1.06083 0.92601 0.97088 1.22436 0.99606 0.80052 0.98017 1.85947 1.81134 1.29470 1.27216 1.19126 0.96354 0.92893 0.84517 1.20317 1.03853 0.93138 0.98714 1.19315 0.97623 0.95071 0.92777 1.25113 0.87260 0.96346 1.11060 1.86550 1.34614 1.37219 1.78495 0.94006 0.88437 0.75882 0.74047 1.21132 1.03392 0.95353 0.97764 1.21233 0.95614 0.94489 0.97931 1.21549 1.07280 1.01680 0.92559 1.21759 1.01699 0.96298 0.95889 1.21544 0.95016 0.95757 1.02622 0.92876 0.92739 0.92515 0.91527 0.92476 0.91313 0.92853 0.93699 0.90660 0.74489 0.85709 0.85501 0.91507 0.91930 0.85333 0.88475 0.75364 1.22680 1.21022 0.83607 0.82741 0.84450 0.89751 0.90723 0.90385 0.92394 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.28 9.67 71.98 0.70 0.98 16 2 C -0.12 0.27 5.40 30.59 0.17 0.43 16 3 C -0.08 0.25 2.19 -10.79 -0.02 0.23 16 4 H 0.08 -0.28 8.14 -2.39 -0.02 -0.29 16 5 C -0.11 0.07 4.96 30.59 0.15 0.22 16 6 C -0.12 -0.01 5.49 30.60 0.17 0.16 16 7 C 0.15 -0.10 2.45 45.00 0.11 0.01 16 8 H 0.06 0.31 7.58 -2.39 -0.02 0.30 16 9 N -0.71 2.03 5.08 -442.52 -2.25 -0.22 16 10 C 0.52 1.14 7.79 87.66 0.68 1.83 16 11 O -0.58 -6.61 15.65 -3.04 -0.05 -6.66 16 12 C -0.13 0.33 6.07 29.85 0.18 0.51 16 13 C 0.07 0.23 4.03 71.98 0.29 0.52 16 14 O -0.32 -2.06 10.14 -92.41 -0.94 -3.00 16 15 C 0.12 0.89 6.69 22.51 0.15 1.04 16 16 C -0.14 -1.07 9.55 22.37 0.21 -0.85 16 17 C -0.05 -0.25 5.42 -19.88 -0.11 -0.35 16 18 C -0.09 -0.11 2.81 71.24 0.20 0.09 16 19 O -0.56 -2.22 12.74 -148.98 -1.90 -4.11 16 20 Si 0.77 -0.92 29.79 68.60 2.04 1.12 16 21 C -0.16 -0.47 8.67 22.28 0.19 -0.27 16 22 C -0.07 -0.20 10.04 22.25 0.22 0.02 16 23 C -0.21 -1.13 9.04 22.37 0.20 -0.93 16 24 C -0.12 0.59 5.39 30.59 0.16 0.76 16 25 C -0.11 0.43 5.20 30.60 0.16 0.59 16 26 H 0.05 -0.08 8.14 -2.39 -0.02 -0.10 16 27 H 0.05 -0.07 6.56 -2.39 -0.02 -0.08 16 28 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 29 H 0.07 -0.19 8.14 -2.38 -0.02 -0.21 16 30 H 0.06 -0.06 8.14 -2.38 -0.02 -0.08 16 31 H 0.07 -0.04 6.56 -2.39 -0.02 -0.05 16 32 H 0.05 0.09 8.14 -2.38 -0.02 0.08 16 33 H 0.04 0.22 8.14 -2.39 -0.02 0.20 16 34 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 35 H 0.42 -3.86 8.60 -92.71 -0.80 -4.66 16 36 H 0.12 -0.73 8.14 -2.38 -0.02 -0.75 16 37 H 0.13 -0.80 8.14 -2.39 -0.02 -0.82 16 38 H 0.07 0.27 7.62 -2.39 -0.02 0.25 16 39 H 0.06 0.30 7.62 -2.39 -0.02 0.28 16 40 H 0.13 0.92 8.06 -2.91 -0.02 0.90 16 41 H 0.10 -0.28 7.96 -2.39 -0.02 -0.30 16 42 H 0.40 -1.82 8.74 -74.06 -0.65 -2.47 16 43 H -0.30 -1.86 7.11 99.48 0.71 -1.15 16 44 H -0.28 -0.67 7.11 99.48 0.71 0.04 16 45 H 0.15 -0.23 4.87 -2.91 -0.01 -0.25 16 46 H 0.15 -0.41 8.06 -2.91 -0.02 -0.44 16 47 H 0.14 0.49 6.30 -2.91 -0.02 0.47 16 48 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16 49 H 0.07 -0.40 8.14 -2.38 -0.02 -0.42 16 50 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 51 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 Total: 0.00 -19.25 401.00 0.25 -19.00 By element: Atomic # 1 Polarization: -10.62 SS G_CDS: -0.49 Total: -11.10 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: 3.82 Total: 4.97 kcal Atomic # 7 Polarization: 2.03 SS G_CDS: -2.25 Total: -0.22 kcal Atomic # 8 Polarization: -10.89 SS G_CDS: -2.88 Total: -13.77 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: 2.04 Total: 1.12 kcal Total: -19.25 0.25 -19.00 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_4549614.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.097 kcal (2) G-P(sol) polarization free energy of solvation -19.248 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.345 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.249 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.999 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.096 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds