Wall clock time and date at job start Tue Mar 9 2021 14:12:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52997 * 109.47225 * 2 1 4 4 H 1.08996 * 109.46952 * 305.00099 * 3 2 1 5 5 C 1.52996 * 109.47131 * 65.00404 * 3 2 1 6 6 C 1.52997 * 109.47131 * 179.97438 * 5 3 2 7 7 C 1.52999 * 109.46991 * 299.99311 * 6 5 3 8 8 H 1.08993 * 109.47839 * 300.00447 * 7 6 5 9 9 N 1.46504 * 109.47050 * 179.97438 * 7 6 5 10 10 C 1.34777 * 119.99637 * 85.00741 * 9 7 6 11 11 O 1.21284 * 119.99852 * 359.97438 * 10 9 7 12 12 C 1.50698 * 119.99873 * 180.02562 * 10 9 7 13 13 O 1.42902 * 109.46874 * 179.97438 * 12 10 9 14 14 C 1.35985 * 116.99810 * 179.97438 * 13 12 10 15 15 C 1.38680 * 119.99951 * 179.72271 * 14 13 12 16 16 C 1.50701 * 119.99956 * 0.02562 * 15 14 13 17 17 O 1.42893 * 109.47183 * 284.99587 * 16 15 14 18 18 Si 1.86302 * 109.47154 * 164.99293 * 16 15 14 19 19 C 1.38155 * 119.99969 * 179.74322 * 15 14 13 20 20 C 1.38673 * 119.99596 * 0.51289 * 19 15 14 21 21 O 1.35985 * 119.99763 * 179.74324 * 20 19 15 22 22 C 1.42900 * 117.00007 * 180.02562 * 21 20 19 23 23 C 1.38719 * 120.00522 * 359.76462 * 20 19 15 24 24 C 1.38104 * 119.99555 * 359.97438 * 23 20 19 25 25 C 1.53006 * 109.46626 * 60.00378 * 7 6 5 26 26 C 1.52997 * 109.47127 * 299.99539 * 25 7 6 27 27 H 1.09000 * 109.47394 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.47383 * 299.99588 * 1 2 3 29 29 H 1.09002 * 109.47498 * 60.00040 * 1 2 3 30 30 H 1.09000 * 109.46868 * 239.99844 * 2 1 3 31 31 H 1.09006 * 109.46911 * 120.00397 * 2 1 3 32 32 H 1.09001 * 109.46993 * 300.00131 * 5 3 2 33 33 H 1.09000 * 109.47380 * 59.99237 * 5 3 2 34 34 H 1.09002 * 109.47153 * 179.97438 * 6 5 3 35 35 H 1.08993 * 109.47194 * 60.00154 * 6 5 3 36 36 H 0.96998 * 120.00034 * 265.00623 * 9 7 6 37 37 H 1.09002 * 109.46846 * 299.99469 * 12 10 9 38 38 H 1.08996 * 109.47759 * 60.00024 * 12 10 9 39 39 H 1.09005 * 109.47071 * 44.99752 * 16 15 14 40 40 H 0.96696 * 114.00233 * 300.00407 * 17 16 15 41 41 H 1.48501 * 109.99995 * 180.02562 * 18 16 15 42 42 H 1.48502 * 110.00253 * 301.32178 * 18 16 15 43 43 H 1.08001 * 120.00032 * 180.23563 * 19 15 14 44 44 H 1.09001 * 109.47024 * 60.00740 * 22 21 20 45 45 H 1.09002 * 109.47004 * 179.97438 * 22 21 20 46 46 H 1.08996 * 109.47726 * 300.00094 * 22 21 20 47 47 H 1.07995 * 120.00431 * 179.97438 * 23 20 19 48 48 H 1.08004 * 119.99975 * 179.97438 * 24 23 20 49 49 H 1.09001 * 109.46801 * 59.99811 * 25 7 6 50 50 H 1.09001 * 109.46998 * 179.97438 * 25 7 6 51 51 H 1.09002 * 109.47153 * 180.02562 * 26 25 7 52 52 H 1.08996 * 109.46952 * 300.00302 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9815 -0.8418 5 6 1.6353 2.1265 1.3074 6 6 2.1459 3.5687 1.3076 7 6 3.6708 3.5699 1.1823 8 1 4.1050 3.0306 2.0240 9 7 4.1596 4.9510 1.1819 10 6 4.3843 5.5865 2.3490 11 8 4.1813 5.0153 3.3995 12 6 4.8866 7.0074 2.3487 13 8 5.0449 7.4568 3.6959 14 6 5.4947 8.7278 3.8738 15 6 5.6655 9.2298 5.1552 16 6 5.3531 8.3668 6.3505 17 8 3.9365 8.2676 6.5092 18 14 6.0974 9.1295 7.8787 19 6 6.1275 10.5192 5.3360 20 6 6.4104 11.3149 4.2361 21 8 6.8602 12.5858 4.4140 22 6 7.1310 13.3490 3.2366 23 6 6.2341 10.8147 2.9543 24 6 5.7773 9.5240 2.7736 25 6 4.0754 2.8859 -0.1252 26 6 3.5649 1.4436 -0.1254 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 1.8933 -0.5139 -0.8900 31 1 1.8933 -0.5139 0.8900 32 1 0.5490 2.1252 1.3970 33 1 2.0699 1.5874 2.1492 34 1 1.8572 4.0562 2.2389 35 1 1.7116 4.1080 0.4659 36 1 4.3216 5.4079 0.3418 37 1 5.8468 7.0531 1.8349 38 1 4.1687 7.6465 1.8349 39 1 5.7725 7.3720 6.1999 40 1 3.4958 9.1171 6.6476 41 1 5.7969 8.2875 9.0644 42 1 7.5667 9.2675 7.7135 43 1 6.2641 10.9090 6.3340 44 1 6.2197 13.4410 2.6456 45 1 7.4817 14.3415 3.5196 46 1 7.8976 12.8470 2.6464 47 1 6.4540 11.4345 2.0977 48 1 5.6397 9.1345 1.7757 49 1 3.6411 3.4253 -0.9669 50 1 5.1618 2.8871 -0.2147 51 1 3.8535 0.9562 -1.0567 52 1 3.9991 0.9043 0.7164 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466078_4974302.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:12:33 Heat of formation + Delta-G solvation = -128.478352 kcal Electronic energy + Delta-G solvation = -31148.057810 eV Core-core repulsion = 26886.316899 eV Total energy + Delta-G solvation = -4261.740911 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.197 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -41.81821 -41.15596 -40.06857 -39.36474 -38.18863 -36.91935 -36.15977 -33.62329 -32.80564 -31.81647 -31.12088 -30.02221 -28.49829 -27.88025 -26.62992 -24.71995 -23.89178 -23.38615 -22.42864 -21.74147 -21.62963 -20.75659 -19.61305 -18.78299 -18.52373 -17.72927 -17.50326 -17.28998 -17.14485 -16.62434 -16.20361 -16.13537 -15.86514 -15.70543 -15.48466 -15.36878 -15.14681 -14.97782 -14.64707 -14.42644 -14.30916 -14.26752 -14.08707 -13.85115 -13.50429 -13.46995 -13.22058 -13.00754 -12.82630 -12.53375 -12.51241 -12.34750 -12.33930 -12.11843 -12.09764 -11.82989 -11.69680 -11.46306 -11.42230 -11.29223 -11.08833 -10.89901 -10.41720 -10.16771 -10.11751 -8.79917 -5.05293 0.06395 0.35618 1.25619 1.41889 1.48666 1.60986 1.92298 2.35359 2.55353 2.60113 3.45618 3.50590 3.63243 3.67595 3.72124 3.76139 3.83265 3.93137 4.03469 4.04465 4.10116 4.13026 4.14208 4.25902 4.31609 4.36393 4.39428 4.45378 4.45992 4.46269 4.50399 4.51036 4.67488 4.69063 4.73966 4.80265 4.80346 4.97451 4.98924 5.04727 5.10444 5.12631 5.15073 5.16136 5.21931 5.22692 5.27053 5.29745 5.39601 5.43749 5.49256 5.56857 6.18060 6.41426 6.48515 6.79369 7.11797 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.121 4.121 3 C -0.083 4.083 4 H 0.080 0.920 5 C -0.112 4.112 6 C -0.124 4.124 7 C 0.147 3.853 8 H 0.058 0.942 9 N -0.707 5.707 10 C 0.510 3.490 11 O -0.571 6.571 12 C 0.037 3.963 13 O -0.312 6.312 14 C 0.096 3.904 15 C -0.125 4.125 16 C -0.068 4.068 17 O -0.552 6.552 18 Si 0.784 3.216 19 C -0.115 4.115 20 C 0.089 3.911 21 O -0.332 6.332 22 C 0.017 3.983 23 C -0.159 4.159 24 C -0.165 4.165 25 C -0.116 4.116 26 C -0.112 4.112 27 H 0.052 0.948 28 H 0.052 0.948 29 H 0.057 0.943 30 H 0.068 0.932 31 H 0.055 0.945 32 H 0.068 0.932 33 H 0.049 0.951 34 H 0.038 0.962 35 H 0.079 0.921 36 H 0.420 0.580 37 H 0.123 0.877 38 H 0.123 0.877 39 H 0.087 0.913 40 H 0.391 0.609 41 H -0.296 1.296 42 H -0.284 1.284 43 H 0.157 0.843 44 H 0.067 0.933 45 H 0.115 0.885 46 H 0.064 0.936 47 H 0.161 0.839 48 H 0.163 0.837 49 H 0.089 0.911 50 H 0.076 0.924 51 H 0.081 0.919 52 H 0.055 0.945 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.560 5.553 -9.629 11.130 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.158 4.158 3 C -0.102 4.102 4 H 0.098 0.902 5 C -0.150 4.150 6 C -0.163 4.163 7 C 0.043 3.957 8 H 0.076 0.924 9 N -0.360 5.360 10 C 0.296 3.704 11 O -0.449 6.449 12 C -0.041 4.041 13 O -0.226 6.226 14 C 0.051 3.949 15 C -0.126 4.126 16 C -0.177 4.177 17 O -0.360 6.360 18 Si 0.689 3.311 19 C -0.133 4.133 20 C 0.043 3.957 21 O -0.246 6.246 22 C -0.077 4.077 23 C -0.177 4.177 24 C -0.184 4.184 25 C -0.154 4.154 26 C -0.150 4.150 27 H 0.071 0.929 28 H 0.071 0.929 29 H 0.077 0.923 30 H 0.087 0.913 31 H 0.073 0.927 32 H 0.087 0.913 33 H 0.068 0.932 34 H 0.057 0.943 35 H 0.098 0.902 36 H 0.258 0.742 37 H 0.140 0.860 38 H 0.140 0.860 39 H 0.105 0.895 40 H 0.241 0.759 41 H -0.225 1.225 42 H -0.210 1.210 43 H 0.174 0.826 44 H 0.086 0.914 45 H 0.133 0.867 46 H 0.083 0.917 47 H 0.178 0.822 48 H 0.181 0.819 49 H 0.107 0.893 50 H 0.095 0.905 51 H 0.099 0.901 52 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges 1.091 4.384 -8.002 9.189 hybrid contribution 0.100 -0.485 -0.872 1.002 sum 1.191 3.899 -8.874 9.766 Atomic orbital electron populations 1.21834 0.95910 1.01667 1.01916 1.21568 0.95953 0.96265 1.02024 1.21191 0.95554 0.95904 0.97518 0.90182 1.21577 1.00986 0.94515 0.97895 1.21854 0.95094 0.97723 1.01589 1.20992 0.93936 0.81256 0.99503 0.92361 1.45782 1.67147 1.14913 1.08202 1.20598 0.77302 0.88371 0.84079 1.90776 1.52392 1.68532 1.33245 1.22704 1.04788 0.92724 0.83884 1.86211 1.81362 1.27108 1.27886 1.18900 0.97795 0.84097 0.94113 1.19508 1.04563 0.94919 0.93597 1.25106 0.87047 1.02037 1.03495 1.86550 1.17944 1.36447 1.95035 0.93985 0.78142 0.85956 0.73009 1.20173 1.02652 0.91690 0.98812 1.18954 0.97676 0.85316 0.93712 1.86083 1.80629 1.22231 1.35671 1.23347 1.01573 0.96124 0.86676 1.21404 1.02960 0.96724 0.96630 1.21366 1.03607 0.94673 0.98720 1.21755 1.01831 0.96219 0.95596 1.21554 0.94979 0.95798 1.02677 0.92869 0.92897 0.92347 0.91320 0.92668 0.91303 0.93189 0.94272 0.90189 0.74184 0.85975 0.85972 0.89530 0.75922 1.22453 1.21047 0.82617 0.91395 0.86715 0.91705 0.82198 0.81924 0.89258 0.90523 0.90058 0.92636 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.18 9.67 71.98 0.70 0.88 16 2 C -0.12 0.19 5.40 30.59 0.17 0.36 16 3 C -0.08 0.20 2.19 -10.79 -0.02 0.18 16 4 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 5 C -0.11 -0.10 4.96 30.59 0.15 0.05 16 6 C -0.12 -0.20 5.49 30.59 0.17 -0.04 16 7 C 0.15 0.09 2.45 44.99 0.11 0.20 16 8 H 0.06 0.43 7.58 -2.39 -0.02 0.41 16 9 N -0.71 1.40 5.08 -442.52 -2.25 -0.85 16 10 C 0.51 2.89 7.87 87.66 0.69 3.58 16 11 O -0.57 -10.39 16.16 15.99 0.26 -10.13 16 12 C 0.04 -0.02 5.22 71.24 0.37 0.35 16 13 O -0.31 -2.81 9.00 -74.34 -0.67 -3.48 16 14 C 0.10 0.53 6.66 22.49 0.15 0.68 16 15 C -0.12 -0.73 5.27 -19.78 -0.10 -0.83 16 16 C -0.07 -0.53 2.37 71.24 0.17 -0.36 16 17 O -0.55 -4.96 12.88 -148.98 -1.92 -6.87 16 18 Si 0.78 2.65 29.91 68.60 2.05 4.71 16 19 C -0.12 -0.32 8.59 22.35 0.19 -0.13 16 20 C 0.09 0.16 6.69 22.49 0.15 0.31 16 21 O -0.33 -0.40 10.50 -93.38 -0.98 -1.38 16 22 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 23 C -0.16 0.27 9.03 22.35 0.20 0.47 16 24 C -0.17 0.18 9.03 22.35 0.20 0.38 16 25 C -0.12 0.58 5.39 30.60 0.16 0.75 16 26 C -0.11 0.39 5.20 30.59 0.16 0.55 16 27 H 0.05 -0.05 8.14 -2.39 -0.02 -0.07 16 28 H 0.05 -0.01 6.57 -2.39 -0.02 -0.03 16 29 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 30 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 31 H 0.05 0.00 8.14 -2.38 -0.02 -0.02 16 32 H 0.07 0.06 6.57 -2.39 -0.02 0.05 16 33 H 0.05 0.19 8.14 -2.39 -0.02 0.18 16 34 H 0.04 0.31 8.14 -2.39 -0.02 0.29 16 35 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 36 H 0.42 -4.30 8.60 -92.71 -0.80 -5.09 16 37 H 0.12 -0.90 7.66 -2.39 -0.02 -0.92 16 38 H 0.12 -0.86 7.66 -2.39 -0.02 -0.88 16 39 H 0.09 1.13 7.82 -2.38 -0.02 1.11 16 40 H 0.39 -0.32 8.70 -74.06 -0.64 -0.96 16 41 H -0.30 -3.09 7.11 99.48 0.71 -2.39 16 42 H -0.28 -2.20 7.11 99.48 0.71 -1.49 16 43 H 0.16 -0.16 5.12 -2.91 -0.01 -0.18 16 44 H 0.07 -0.58 7.66 -2.39 -0.02 -0.60 16 45 H 0.11 -1.03 8.14 -2.39 -0.02 -1.05 16 46 H 0.06 -0.53 7.66 -2.39 -0.02 -0.55 16 47 H 0.16 -1.19 6.29 -2.91 -0.02 -1.21 16 48 H 0.16 -1.33 6.29 -2.91 -0.02 -1.35 16 49 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 50 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 51 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 52 H 0.05 -0.05 8.14 -2.39 -0.02 -0.07 16 Total: 0.00 -27.66 409.07 0.75 -26.91 By element: Atomic # 1 Polarization: -16.81 SS G_CDS: -0.47 Total: -17.28 kcal Atomic # 6 Polarization: 3.66 SS G_CDS: 4.73 Total: 8.39 kcal Atomic # 7 Polarization: 1.40 SS G_CDS: -2.25 Total: -0.85 kcal Atomic # 8 Polarization: -18.56 SS G_CDS: -3.31 Total: -21.87 kcal Atomic # 14 Polarization: 2.65 SS G_CDS: 2.05 Total: 4.71 kcal Total: -27.66 0.75 -26.91 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_4974302.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.569 kcal (2) G-P(sol) polarization free energy of solvation -27.659 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.749 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.909 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.478 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds