Wall clock time and date at job start Tue Mar 9 2021 14:13:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.52993 * 109.47555 * 2 1 4 4 H 1.09002 * 109.47168 * 305.00618 * 3 2 1 5 5 C 1.53002 * 109.46748 * 64.99849 * 3 2 1 6 6 C 1.53007 * 109.47118 * 180.02562 * 5 3 2 7 7 C 1.52995 * 109.47079 * 300.00323 * 6 5 3 8 8 H 1.09002 * 109.47395 * 300.00081 * 7 6 5 9 9 N 1.46503 * 109.47346 * 179.97438 * 7 6 5 10 10 C 1.34779 * 119.99579 * 84.99849 * 9 7 6 11 11 O 1.21281 * 120.00098 * 0.02562 * 10 9 7 12 12 C 1.50702 * 119.99893 * 180.02562 * 10 9 7 13 13 N 1.46498 * 109.47194 * 179.97438 * 12 10 9 14 14 C 1.36837 * 125.06654 * 265.04155 * 13 12 10 15 15 C 1.34228 * 109.94006 * 179.97438 * 14 13 12 16 16 C 1.50705 * 126.50220 * 180.02562 * 15 14 13 17 17 O 1.42899 * 109.47119 * 254.97629 * 16 15 14 18 18 Si 1.86300 * 109.46577 * 14.97542 * 16 15 14 19 19 C 1.46491 * 106.99909 * 359.97438 * 15 14 13 20 20 C 1.39594 * 134.03489 * 179.97438 * 19 15 14 21 21 C 1.36662 * 119.76463 * 180.02562 * 20 19 15 22 22 C 1.38791 * 120.52795 * 0.02562 * 21 20 19 23 23 C 1.37791 * 120.66406 * 0.26219 * 22 21 20 24 24 C 1.37694 * 125.06094 * 85.00316 * 13 12 10 25 25 C 1.53002 * 109.47410 * 59.99856 * 7 6 5 26 26 C 1.52997 * 109.47443 * 184.99738 * 3 2 1 27 27 H 1.09007 * 109.47300 * 179.97438 * 1 2 3 28 28 H 1.08996 * 109.47244 * 300.00018 * 1 2 3 29 29 H 1.09005 * 109.46898 * 59.99870 * 1 2 3 30 30 H 1.09004 * 109.46936 * 240.00140 * 2 1 3 31 31 H 1.09005 * 109.46898 * 120.00130 * 2 1 3 32 32 H 1.09000 * 109.47861 * 299.99822 * 5 3 2 33 33 H 1.09005 * 109.47383 * 60.00389 * 5 3 2 34 34 H 1.08999 * 109.47429 * 180.02562 * 6 5 3 35 35 H 1.09005 * 109.46766 * 59.99901 * 6 5 3 36 36 H 0.96991 * 120.00286 * 264.99980 * 9 7 6 37 37 H 1.09005 * 109.46717 * 60.00120 * 12 10 9 38 38 H 1.08996 * 109.46876 * 300.00242 * 12 10 9 39 39 H 1.07997 * 125.02565 * 0.02562 * 14 13 12 40 40 H 1.09003 * 109.46996 * 134.97421 * 16 15 14 41 41 H 0.96696 * 113.99944 * 59.99741 * 17 16 15 42 42 H 1.48505 * 109.99570 * 179.97438 * 18 16 15 43 43 H 1.48491 * 110.00285 * 301.31531 * 18 16 15 44 44 H 1.08005 * 120.11859 * 0.02682 * 20 19 15 45 45 H 1.08004 * 119.73468 * 180.02562 * 21 20 19 46 46 H 1.08002 * 119.66399 * 179.97438 * 22 21 20 47 47 H 1.08000 * 120.10578 * 179.72137 * 23 22 21 48 48 H 1.08998 * 109.47067 * 60.00019 * 25 7 6 49 49 H 1.09007 * 109.47288 * 180.02562 * 25 7 6 50 50 H 1.08999 * 109.47003 * 60.00597 * 26 3 2 51 51 H 1.08998 * 109.47252 * 300.00328 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 1 1.6054 1.9815 -0.8418 5 6 1.6353 2.1264 1.3074 6 6 2.1448 3.5691 1.3072 7 6 3.6695 3.5715 1.1812 8 1 4.1046 3.0326 2.0229 9 7 4.1574 4.9529 1.1804 10 6 4.3820 5.5888 2.3473 11 8 4.1807 5.0173 3.3979 12 6 4.8834 7.0100 2.3465 13 7 5.0458 7.4713 3.7275 14 6 4.1110 8.1760 4.4360 15 6 4.5740 8.4405 5.6678 16 6 3.8511 9.1939 6.7546 17 8 4.4090 10.5036 6.8784 18 14 2.0441 9.3269 6.3214 19 6 5.9148 7.8570 5.7558 20 6 6.8843 7.7999 6.7586 21 6 8.0694 7.1622 6.5210 22 6 8.3174 6.5710 5.2900 23 6 7.3768 6.6207 4.2843 24 6 6.1615 7.2595 4.5061 25 6 4.0743 2.8874 -0.1262 26 6 3.5648 1.4442 -0.1257 27 1 -0.3634 -1.0277 -0.0005 28 1 -0.3633 0.5138 0.8899 29 1 -0.3633 0.5139 -0.8900 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5139 0.8900 32 1 0.5489 2.1252 1.3970 33 1 2.0699 1.5874 2.1492 34 1 1.8568 4.0563 2.2387 35 1 1.7098 4.1079 0.4653 36 1 4.3188 5.4097 0.3402 37 1 4.1647 7.6485 1.8327 38 1 5.8433 7.0563 1.8323 39 1 3.1436 8.4745 4.0600 40 1 3.9600 8.6617 7.6997 41 1 4.3470 11.0352 6.0730 42 1 1.3199 10.0672 7.3857 43 1 1.8838 10.0224 5.0193 44 1 6.6984 8.2580 7.7189 45 1 8.8189 7.1179 7.2973 46 1 9.2590 6.0710 5.1172 47 1 7.5811 6.1614 3.3284 48 1 3.6394 3.4263 -0.9680 49 1 5.1607 2.8887 -0.2158 50 1 3.8532 0.9569 -1.0571 51 1 3.9994 0.9051 0.7161 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466078_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:13:10 Heat of formation + Delta-G solvation = -20.366072 kcal Electronic energy + Delta-G solvation = -30195.125104 eV Core-core repulsion = 26253.558485 eV Total energy + Delta-G solvation = -3941.566619 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.193 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.47515 -41.06587 -39.53064 -38.02225 -37.59322 -36.15479 -34.16192 -33.45384 -31.88853 -31.37782 -30.12181 -29.71914 -28.43379 -25.79467 -24.62318 -23.84341 -23.53357 -22.57674 -21.79864 -21.60295 -20.88578 -20.54282 -18.65013 -18.43738 -17.78065 -17.38887 -16.94124 -16.45098 -16.29452 -16.08066 -15.90412 -15.71550 -15.45020 -15.23486 -15.12014 -14.76829 -14.60189 -14.53244 -14.32349 -14.28852 -14.00364 -13.93476 -13.56822 -13.32302 -13.28535 -12.83080 -12.61549 -12.58420 -12.45652 -12.39624 -12.27352 -12.20914 -11.87292 -11.77054 -11.62029 -11.54590 -11.36959 -11.14815 -10.96149 -10.40444 -10.34472 -10.15450 -9.01403 -8.52140 -4.85868 0.28791 0.80879 1.39301 1.43220 1.44526 1.62615 1.71591 2.03063 2.14335 3.12320 3.43622 3.49090 3.57235 3.58923 3.60784 3.72709 3.78099 3.82694 3.87013 3.94943 4.05893 4.08234 4.23031 4.30831 4.32406 4.36773 4.37988 4.41364 4.43196 4.60031 4.60750 4.65625 4.71331 4.73346 4.82192 4.91238 4.91939 4.93081 5.00244 5.01416 5.05244 5.06785 5.16639 5.17937 5.23435 5.26645 5.33881 5.43060 5.47721 5.65666 5.81986 5.87530 5.91039 6.18419 6.33804 6.38697 6.60454 7.05073 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.121 4.121 3 C -0.090 4.090 4 H 0.071 0.929 5 C -0.113 4.113 6 C -0.128 4.128 7 C 0.146 3.854 8 H 0.089 0.911 9 N -0.726 5.726 10 C 0.491 3.509 11 O -0.511 6.511 12 C 0.091 3.909 13 N -0.465 5.465 14 C 0.066 3.934 15 C -0.193 4.193 16 C -0.037 4.037 17 O -0.531 6.531 18 Si 0.682 3.318 19 C -0.086 4.086 20 C -0.065 4.065 21 C -0.146 4.146 22 C -0.096 4.096 23 C -0.128 4.128 24 C 0.109 3.891 25 C -0.126 4.126 26 C -0.112 4.112 27 H 0.053 0.947 28 H 0.057 0.943 29 H 0.053 0.947 30 H 0.062 0.938 31 H 0.062 0.938 32 H 0.069 0.931 33 H 0.065 0.935 34 H 0.067 0.933 35 H 0.063 0.937 36 H 0.400 0.600 37 H 0.121 0.879 38 H 0.117 0.883 39 H 0.168 0.832 40 H 0.114 0.886 41 H 0.372 0.628 42 H -0.256 1.256 43 H -0.260 1.260 44 H 0.123 0.877 45 H 0.123 0.877 46 H 0.125 0.875 47 H 0.114 0.886 48 H 0.068 0.932 49 H 0.069 0.931 50 H 0.069 0.931 51 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.025 -1.700 -6.831 7.113 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.158 4.158 3 C -0.108 4.108 4 H 0.089 0.911 5 C -0.151 4.151 6 C -0.167 4.167 7 C 0.042 3.958 8 H 0.107 0.893 9 N -0.379 5.379 10 C 0.275 3.725 11 O -0.385 6.385 12 C -0.036 4.036 13 N -0.148 5.148 14 C -0.059 4.059 15 C -0.201 4.201 16 C -0.147 4.147 17 O -0.337 6.337 18 Si 0.583 3.417 19 C -0.090 4.090 20 C -0.083 4.083 21 C -0.165 4.165 22 C -0.116 4.116 23 C -0.149 4.149 24 C 0.005 3.995 25 C -0.164 4.164 26 C -0.150 4.150 27 H 0.073 0.927 28 H 0.076 0.924 29 H 0.072 0.928 30 H 0.080 0.920 31 H 0.081 0.919 32 H 0.088 0.912 33 H 0.084 0.916 34 H 0.086 0.914 35 H 0.082 0.918 36 H 0.234 0.766 37 H 0.139 0.861 38 H 0.135 0.865 39 H 0.185 0.815 40 H 0.132 0.868 41 H 0.220 0.780 42 H -0.180 1.180 43 H -0.185 1.185 44 H 0.141 0.859 45 H 0.141 0.859 46 H 0.143 0.857 47 H 0.132 0.868 48 H 0.087 0.913 49 H 0.088 0.912 50 H 0.087 0.913 51 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -1.785 -1.877 -5.922 6.464 hybrid contribution 0.750 1.003 -1.049 1.634 sum -1.035 -0.874 -6.971 7.101 Atomic orbital electron populations 1.21830 0.95767 1.01749 1.01926 1.21569 0.96072 0.96078 1.02115 1.21240 0.95175 0.96216 0.98176 0.91082 1.21603 1.01152 0.94767 0.97594 1.21912 0.94731 0.97599 1.02432 1.21048 0.94364 0.81140 0.99227 0.89323 1.46071 1.68245 1.15282 1.08277 1.20972 0.78405 0.88698 0.84434 1.90812 1.49835 1.66935 1.30888 1.21597 1.05054 0.93898 0.83007 1.43204 1.13518 1.47279 1.10829 1.21572 0.94407 0.97858 0.92033 1.20572 0.95736 1.08226 0.95538 1.24277 1.06792 0.83529 1.00119 1.86604 1.81793 1.25239 1.40046 0.95020 0.76372 0.90564 0.79744 1.18936 0.94720 1.01892 0.93487 1.20310 0.92266 0.97791 0.97968 1.20672 0.97643 1.00632 0.97550 1.20826 0.98558 0.99282 0.92903 1.19952 0.91857 1.02877 1.00166 1.18167 0.89099 1.01277 0.90981 1.21815 1.01295 0.96702 0.96559 1.21553 0.95432 0.95437 1.02558 0.92748 0.92429 0.92798 0.91952 0.91893 0.91244 0.91647 0.91392 0.91797 0.76558 0.86110 0.86530 0.81503 0.86796 0.78047 1.18008 1.18537 0.85912 0.85927 0.85745 0.86780 0.91281 0.91243 0.91274 0.91519 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.19 9.67 37.16 0.36 0.55 16 2 C -0.12 0.17 5.40 -26.74 -0.14 0.03 16 3 C -0.09 0.17 2.19 -90.62 -0.20 -0.03 16 4 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 5 C -0.11 0.13 4.96 -26.73 -0.13 0.00 16 6 C -0.13 0.13 5.49 -26.73 -0.15 -0.02 16 7 C 0.15 -0.19 2.45 -67.93 -0.17 -0.36 16 8 H 0.09 0.11 7.58 -51.93 -0.39 -0.28 16 9 N -0.73 1.82 5.08 -53.80 -0.27 1.54 16 10 C 0.49 0.02 7.86 -10.98 -0.09 -0.06 16 11 O -0.51 -2.52 16.09 5.56 0.09 -2.43 16 12 C 0.09 -0.20 6.48 -5.19 -0.03 -0.23 16 13 N -0.47 -0.68 2.27 -115.71 -0.26 -0.94 16 14 C 0.07 0.08 9.89 -16.73 -0.17 -0.08 16 15 C -0.19 -0.51 5.58 -102.71 -0.57 -1.08 16 16 C -0.04 -0.06 3.06 36.01 0.11 0.05 16 17 O -0.53 -1.46 12.88 -35.23 -0.45 -1.91 16 18 Si 0.68 0.05 30.82 -169.99 -5.24 -5.19 16 19 C -0.09 -0.37 6.35 -105.14 -0.67 -1.04 16 20 C -0.06 -0.25 10.05 -39.65 -0.40 -0.64 16 21 C -0.15 -0.41 9.97 -39.95 -0.40 -0.80 16 22 C -0.10 -0.23 10.01 -39.54 -0.40 -0.63 16 23 C -0.13 -0.35 10.00 -39.43 -0.39 -0.75 16 24 C 0.11 0.39 6.80 -83.99 -0.57 -0.18 16 25 C -0.13 0.35 5.39 -26.70 -0.14 0.21 16 26 C -0.11 0.24 5.21 -26.70 -0.14 0.11 16 27 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.06 -0.07 6.56 -51.93 -0.34 -0.41 16 29 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.06 -0.09 8.14 -51.93 -0.42 -0.52 16 31 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.07 -0.08 6.57 -51.93 -0.34 -0.42 16 33 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 35 H 0.06 -0.10 8.14 -51.93 -0.42 -0.53 16 36 H 0.40 -2.20 8.60 -40.82 -0.35 -2.55 16 37 H 0.12 -0.64 8.12 -51.93 -0.42 -1.06 16 38 H 0.12 -0.49 8.14 -51.93 -0.42 -0.92 16 39 H 0.17 -0.23 6.27 -52.49 -0.33 -0.56 16 40 H 0.11 0.18 7.96 -51.93 -0.41 -0.24 16 41 H 0.37 -0.11 8.70 45.56 0.40 0.29 16 42 H -0.26 -0.81 7.11 56.52 0.40 -0.41 16 43 H -0.26 -0.24 7.00 56.52 0.40 0.15 16 44 H 0.12 0.35 8.06 -52.48 -0.42 -0.07 16 45 H 0.12 0.10 8.06 -52.48 -0.42 -0.32 16 46 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 47 H 0.11 0.09 8.06 -52.49 -0.42 -0.33 16 48 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 49 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 50 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 51 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 LS Contribution 406.49 15.07 6.13 6.13 Total: 0.00 -8.68 406.49 -12.89 -21.56 By element: Atomic # 1 Polarization: -5.20 SS G_CDS: -8.59 Total: -13.79 kcal Atomic # 6 Polarization: -0.68 SS G_CDS: -4.29 Total: -4.96 kcal Atomic # 7 Polarization: 1.14 SS G_CDS: -0.54 Total: 0.60 kcal Atomic # 8 Polarization: -3.98 SS G_CDS: -0.36 Total: -4.35 kcal Atomic # 14 Polarization: 0.05 SS G_CDS: -5.24 Total: -5.19 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -8.68 -12.89 -21.56 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.196 kcal (2) G-P(sol) polarization free energy of solvation -8.677 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.481 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.885 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.562 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.366 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds