Wall clock time and date at job start Tue Mar 9 2021 12:52:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86303 * 109.47218 * 2 1 4 4 C 1.50700 * 109.47136 * 119.99834 * 2 1 3 5 5 C 1.34455 * 126.48532 * 255.02661 * 4 2 1 6 6 N 1.36553 * 109.98523 * 179.97438 * 5 4 2 7 7 C 1.37825 * 109.86326 * 0.02562 * 6 5 4 8 8 C 1.38651 * 133.38450 * 180.35469 * 7 6 5 9 9 C 1.39320 * 119.66604 * 180.17166 * 8 7 6 10 10 C 1.47583 * 119.82664 * 179.72756 * 9 8 7 11 11 O 1.21589 * 120.00571 * 359.72901 * 10 9 8 12 12 N 1.34783 * 119.99396 * 179.72691 * 10 9 8 13 13 C 1.46502 * 119.99683 * 179.97438 * 12 10 9 14 14 H 1.09007 * 112.90475 * 23.75266 * 13 12 10 15 15 C 1.53779 * 113.61301 * 154.99921 * 13 12 10 16 16 C 1.53787 * 87.07963 * 89.11687 * 15 13 12 17 17 H 1.08994 * 113.61447 * 270.88515 * 16 15 13 18 18 C 1.50702 * 113.61150 * 139.98062 * 16 15 13 19 19 C 1.38247 * 119.97271 * 299.72778 * 18 16 15 20 20 C 1.38202 * 120.02096 * 179.73142 * 19 18 16 21 21 C 1.38462 * 119.97431 * 0.52104 * 20 19 18 22 22 F 1.35104 * 120.02434 * 179.72821 * 21 20 19 23 23 C 1.38459 * 119.94749 * 359.75169 * 21 20 19 24 24 C 1.38192 * 119.97427 * 0.02562 * 23 21 20 25 25 C 1.53779 * 113.61564 * 252.49989 * 13 12 10 26 26 C 1.40196 * 120.33862 * 359.45261 * 9 8 7 27 27 C 1.36232 * 120.37509 * 0.25216 * 26 9 8 28 28 C 1.39873 * 119.96218 * 0.02562 * 27 26 9 29 29 H 0.96705 * 113.99489 * 60.00073 * 1 2 3 30 30 H 1.09002 * 109.47543 * 240.00490 * 2 1 3 31 31 H 1.48507 * 109.99869 * 298.68090 * 3 2 1 32 32 H 1.48502 * 109.99888 * 59.99450 * 3 2 1 33 33 H 1.07997 * 125.00203 * 359.97438 * 5 4 2 34 34 H 0.97000 * 125.06784 * 179.97438 * 6 5 4 35 35 H 1.08003 * 120.16679 * 359.90191 * 8 7 6 36 36 H 0.96996 * 119.99920 * 0.02562 * 12 10 9 37 37 H 1.08997 * 113.61646 * 334.57319 * 15 13 12 38 38 H 1.09000 * 113.61527 * 203.66590 * 15 13 12 39 39 H 1.07993 * 119.99225 * 359.97438 * 19 18 16 40 40 H 1.07999 * 120.00942 * 180.25206 * 20 19 18 41 41 H 1.07997 * 120.00860 * 180.02562 * 23 21 20 42 42 H 1.08000 * 119.98472 * 180.02562 * 24 23 21 43 43 H 1.09002 * 113.61557 * 156.33711 * 25 13 12 44 44 H 1.09004 * 113.61501 * 25.43131 * 25 13 12 45 45 H 1.07998 * 119.81426 * 180.27449 * 26 9 8 46 46 H 1.08006 * 120.01990 * 180.02562 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.4612 -0.1363 2.3248 6 7 2.8026 -1.0946 3.2357 7 6 2.4946 -2.3431 2.7397 8 6 2.6253 -3.6275 3.2452 9 6 2.2135 -4.7155 2.4786 10 6 2.3565 -6.0846 3.0107 11 8 2.8373 -6.2612 4.1134 12 7 1.9542 -7.1392 2.2742 13 6 2.0967 -8.4983 2.8021 14 1 2.1379 -8.5284 3.8910 15 6 1.1022 -9.5022 2.1954 16 6 2.1513 -9.7601 1.1010 17 1 2.0603 -9.0939 0.2432 18 6 2.2694 -11.2101 0.7077 19 6 2.6292 -12.1545 1.6510 20 6 2.7324 -13.4853 1.2927 21 6 2.4857 -13.8710 -0.0140 22 9 2.5917 -15.1709 -0.3666 23 6 2.1310 -12.9234 -0.9591 24 6 2.0240 -11.5939 -0.5975 25 6 3.2109 -9.3102 2.1208 26 6 1.6586 -4.5160 1.2066 27 6 1.5209 -3.2569 0.7048 28 6 1.9350 -2.1548 1.4600 29 1 -0.3933 0.4417 -0.7651 30 1 1.7924 -0.5137 -0.8900 31 1 1.5879 2.4586 -1.2243 32 1 1.5614 2.4679 1.2084 33 1 2.5967 0.9262 2.4629 34 1 3.2030 -0.9224 4.1022 35 1 3.0483 -3.7841 4.2265 36 1 1.5709 -6.9983 1.3943 37 1 0.1877 -9.0403 1.8234 38 1 0.9125 -10.3672 2.8310 39 1 2.8259 -11.8529 2.6692 40 1 3.0095 -14.2235 2.0308 41 1 1.9380 -13.2232 -1.9786 42 1 1.7469 -10.8547 -1.3345 43 1 3.5976 -10.1227 2.7359 44 1 3.9987 -8.6933 1.6884 45 1 1.3381 -5.3652 0.6214 46 1 1.0923 -3.1098 -0.2756 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466350_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:13 Heat of formation + Delta-G solvation = 6.308786 kcal Electronic energy + Delta-G solvation = -30747.038028 eV Core-core repulsion = 26290.882437 eV Total energy + Delta-G solvation = -4456.155591 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.137 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -49.77191 -42.46197 -41.59861 -40.31512 -38.76362 -37.87600 -37.46571 -34.52809 -33.34974 -32.16469 -31.57641 -30.76156 -30.33869 -26.81174 -26.59607 -26.18292 -24.68525 -24.01267 -23.61259 -22.59727 -21.55537 -20.61360 -20.23847 -19.30976 -18.71852 -18.47511 -18.21670 -17.47614 -17.31845 -17.10864 -16.64816 -16.48112 -16.01041 -16.00260 -15.83447 -15.52280 -15.30624 -15.07499 -15.02150 -14.74186 -14.69668 -14.54382 -14.39747 -14.18513 -13.95419 -13.84593 -13.70651 -13.50943 -13.19296 -12.95898 -12.65994 -12.56671 -12.27250 -12.16620 -11.91581 -11.85972 -11.73306 -11.30678 -10.91413 -10.72427 -10.40606 -10.12602 -10.06304 -9.47973 -9.33182 -8.79457 -5.00711 -0.24318 0.12716 0.23425 0.40822 1.25400 1.36810 1.53640 1.86580 1.90889 2.00961 2.20743 2.53169 2.93201 3.31058 3.36250 3.45700 3.56372 3.57987 3.64377 3.72378 3.75331 3.78523 3.87657 3.92370 3.96836 4.06544 4.09578 4.23851 4.24659 4.36615 4.38861 4.48473 4.56213 4.58990 4.63963 4.72195 4.80197 4.82524 4.91640 4.95818 4.99956 5.01616 5.06129 5.15944 5.24809 5.25120 5.44340 5.45315 5.52330 5.60978 5.62307 5.89964 6.00160 6.38726 6.48826 6.49383 7.24224 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.038 4.038 3 Si 0.680 3.320 4 C -0.164 4.164 5 C 0.080 3.920 6 N -0.583 5.583 7 C 0.082 3.918 8 C -0.054 4.054 9 C -0.123 4.123 10 C 0.567 3.433 11 O -0.536 6.536 12 N -0.709 5.709 13 C 0.120 3.880 14 H 0.107 0.893 15 C -0.136 4.136 16 C -0.073 4.073 17 H 0.100 0.900 18 C -0.082 4.082 19 C -0.088 4.088 20 C -0.150 4.150 21 C 0.094 3.906 22 F -0.140 7.140 23 C -0.151 4.151 24 C -0.087 4.087 25 C -0.145 4.145 26 C -0.113 4.113 27 C -0.072 4.072 28 C -0.062 4.062 29 H 0.377 0.623 30 H 0.073 0.927 31 H -0.260 1.260 32 H -0.255 1.255 33 H 0.177 0.823 34 H 0.423 0.577 35 H 0.137 0.863 36 H 0.401 0.599 37 H 0.078 0.922 38 H 0.099 0.901 39 H 0.134 0.866 40 H 0.136 0.864 41 H 0.135 0.865 42 H 0.132 0.868 43 H 0.096 0.904 44 H 0.076 0.924 45 H 0.125 0.875 46 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.079 3.865 -2.857 4.926 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.148 4.148 3 Si 0.581 3.419 4 C -0.172 4.172 5 C -0.049 4.049 6 N -0.185 5.185 7 C -0.024 4.024 8 C -0.076 4.076 9 C -0.127 4.127 10 C 0.355 3.645 11 O -0.413 6.413 12 N -0.361 5.361 13 C 0.014 3.986 14 H 0.125 0.875 15 C -0.174 4.174 16 C -0.091 4.091 17 H 0.118 0.882 18 C -0.082 4.082 19 C -0.106 4.106 20 C -0.169 4.169 21 C 0.074 3.926 22 F -0.119 7.119 23 C -0.170 4.170 24 C -0.105 4.105 25 C -0.183 4.183 26 C -0.133 4.133 27 C -0.091 4.091 28 C -0.067 4.067 29 H 0.224 0.776 30 H 0.091 0.909 31 H -0.184 1.184 32 H -0.179 1.179 33 H 0.194 0.806 34 H 0.261 0.739 35 H 0.154 0.846 36 H 0.238 0.762 37 H 0.097 0.903 38 H 0.118 0.882 39 H 0.152 0.848 40 H 0.154 0.846 41 H 0.153 0.847 42 H 0.150 0.850 43 H 0.114 0.886 44 H 0.095 0.905 45 H 0.143 0.857 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 1.363 4.250 -1.392 4.676 hybrid contribution -1.121 -0.308 -0.757 1.388 sum 0.242 3.942 -2.150 4.497 Atomic orbital electron populations 1.86644 1.18254 1.79965 1.49517 1.24010 0.83898 1.09856 0.97032 0.95237 0.91508 0.74494 0.80658 1.19499 1.09434 0.91356 0.96889 1.21749 0.99776 0.94433 0.88905 1.41691 1.54776 1.03995 1.18065 1.18060 1.03346 0.86324 0.94713 1.20076 0.99366 0.88039 1.00074 1.19385 1.05291 0.92213 0.95832 1.18153 0.77270 0.84492 0.84536 1.90796 1.44217 1.86171 1.20145 1.45552 1.64384 1.05261 1.20914 1.21847 0.96316 0.80573 0.99821 0.87489 1.23446 0.97279 0.99269 0.97415 1.21602 0.97570 0.92359 0.97616 0.88225 1.19755 0.99748 0.95215 0.93455 1.20897 0.98211 0.91543 0.99929 1.21187 1.03176 0.97561 0.94986 1.17781 1.02367 0.78445 0.93960 1.91521 1.93692 1.34059 1.92596 1.21188 1.02824 0.93114 0.99882 1.20934 0.98485 0.95136 0.95913 1.23591 0.97024 1.00038 0.97673 1.20656 1.00646 0.97267 0.94747 1.20160 0.98786 0.90481 0.99628 1.19168 1.00879 0.93009 0.93644 0.77575 0.90916 1.18442 1.17924 0.80632 0.73922 0.84555 0.76246 0.90310 0.88229 0.84821 0.84627 0.84669 0.85006 0.88561 0.90486 0.85709 0.85338 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.50 12.86 -35.23 -0.45 -0.95 16 2 C -0.04 0.02 3.05 36.01 0.11 0.13 16 3 Si 0.68 -1.33 30.79 -169.99 -5.23 -6.57 16 4 C -0.16 -0.15 5.60 -102.74 -0.58 -0.72 16 5 C 0.08 -0.06 10.43 -16.79 -0.18 -0.24 16 6 N -0.58 0.45 6.06 -10.69 -0.06 0.38 16 7 C 0.08 0.13 7.26 -84.00 -0.61 -0.48 16 8 C -0.05 -0.11 9.61 -39.03 -0.37 -0.48 16 9 C -0.12 -0.21 5.87 -104.95 -0.62 -0.83 16 10 C 0.57 1.44 7.76 -12.45 -0.10 1.34 16 11 O -0.54 -3.27 15.91 5.29 0.08 -3.19 16 12 N -0.71 0.41 5.21 -54.04 -0.28 0.13 16 13 C 0.12 -0.11 4.32 -67.12 -0.29 -0.40 16 14 H 0.11 0.09 7.47 -51.93 -0.39 -0.30 16 15 C -0.14 0.34 7.29 -25.92 -0.19 0.15 16 16 C -0.07 0.18 3.86 -90.95 -0.35 -0.17 16 17 H 0.10 -0.34 8.09 -51.93 -0.42 -0.76 16 18 C -0.08 0.08 5.29 -104.62 -0.55 -0.47 16 19 C -0.09 0.06 8.62 -39.59 -0.34 -0.28 16 20 C -0.15 -0.07 10.03 -39.51 -0.40 -0.47 16 21 C 0.09 0.17 7.30 -39.42 -0.29 -0.12 16 22 F -0.14 -0.47 17.27 2.25 0.04 -0.43 16 23 C -0.15 -0.07 10.03 -39.52 -0.40 -0.46 16 24 C -0.09 0.07 9.71 -39.60 -0.38 -0.32 16 25 C -0.14 0.22 7.25 -25.92 -0.19 0.03 16 26 C -0.11 0.01 9.46 -39.57 -0.37 -0.37 16 27 C -0.07 -0.06 10.03 -39.69 -0.40 -0.46 16 28 C -0.06 -0.12 6.35 -105.05 -0.67 -0.79 16 29 H 0.38 -1.17 8.74 45.56 0.40 -0.77 16 30 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 31 H -0.26 -0.09 7.11 56.52 0.40 0.32 16 32 H -0.25 -0.15 7.04 56.52 0.40 0.25 16 33 H 0.18 -0.61 6.30 -52.49 -0.33 -0.94 16 34 H 0.42 -1.54 8.96 -40.82 -0.37 -1.91 16 35 H 0.14 0.24 7.62 -52.48 -0.40 -0.16 16 36 H 0.40 -1.22 6.69 -40.82 -0.27 -1.49 16 37 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 38 H 0.10 -0.26 7.73 -51.93 -0.40 -0.66 16 39 H 0.13 -0.33 6.64 -52.49 -0.35 -0.67 16 40 H 0.14 -0.11 8.06 -52.49 -0.42 -0.53 16 41 H 0.14 -0.12 8.06 -52.49 -0.42 -0.54 16 42 H 0.13 -0.37 8.05 -52.49 -0.42 -0.79 16 43 H 0.10 -0.19 6.29 -51.93 -0.33 -0.51 16 44 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 45 H 0.13 -0.38 6.36 -52.49 -0.33 -0.71 16 46 H 0.13 -0.09 8.06 -52.48 -0.42 -0.51 16 LS Contribution 388.75 15.07 5.86 5.86 Total: 0.00 -9.97 388.75 -12.55 -22.52 By element: Atomic # 1 Polarization: -7.02 SS G_CDS: -5.34 Total: -12.36 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -7.16 Total: -5.40 kcal Atomic # 7 Polarization: 0.86 SS G_CDS: -0.35 Total: 0.51 kcal Atomic # 8 Polarization: -3.77 SS G_CDS: -0.37 Total: -4.13 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.04 Total: -0.43 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.23 Total: -6.57 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -9.97 -12.55 -22.52 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.828 kcal (2) G-P(sol) polarization free energy of solvation -9.971 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.857 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.548 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.520 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.309 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds