Wall clock time and date at job start Tue Mar 9 2021 12:56:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86301 * 109.46878 * 2 1 4 4 C 1.50698 * 109.47075 * 120.00030 * 2 1 3 5 5 C 1.38245 * 119.93660 * 244.97917 * 4 2 1 6 6 C 1.38239 * 120.04027 * 179.71913 * 5 4 2 7 7 Br 1.89105 * 120.03695 * 180.27719 * 6 5 4 8 8 C 1.38788 * 119.93041 * 0.53782 * 6 5 4 9 9 O 1.35920 * 120.06343 * 179.76771 * 8 6 5 10 10 C 1.42899 * 117.00320 * 179.71925 * 9 8 6 11 11 C 1.50700 * 109.47143 * 179.97438 * 10 9 8 12 12 O 1.21283 * 119.99803 * 359.97438 * 11 10 9 13 13 N 1.34777 * 119.99675 * 180.27800 * 11 10 9 14 14 C 1.46497 * 119.99525 * 179.72583 * 13 11 10 15 15 H 1.09001 * 112.85727 * 336.19659 * 14 13 11 16 16 C 1.53787 * 113.61668 * 107.50061 * 14 13 11 17 17 C 1.53786 * 87.08169 * 89.11277 * 16 14 13 18 18 H 1.09002 * 113.68968 * 270.87754 * 17 16 14 19 19 C 1.50698 * 113.61411 * 139.98146 * 17 16 14 20 20 C 1.38243 * 119.97394 * 322.23326 * 19 17 16 21 21 C 1.38199 * 120.02261 * 179.76680 * 20 19 17 22 22 C 1.38458 * 119.97541 * 0.50523 * 21 20 19 23 23 F 1.35099 * 120.02655 * 179.76830 * 22 21 20 24 24 C 1.38462 * 119.94865 * 359.74716 * 22 21 20 25 25 C 1.38195 * 119.97340 * 359.97438 * 24 22 21 26 26 C 1.53784 * 113.61535 * 204.99648 * 14 13 11 27 27 C 1.38720 * 119.87946 * 359.48148 * 8 6 5 28 28 C 1.38142 * 119.95400 * 0.26368 * 27 8 6 29 29 H 0.96701 * 114.00478 * 299.99847 * 1 2 3 30 30 H 1.08999 * 109.47009 * 240.00160 * 2 1 3 31 31 H 1.48495 * 110.00320 * 299.99811 * 3 2 1 32 32 H 1.48506 * 110.00028 * 61.31801 * 3 2 1 33 33 H 1.08003 * 119.98413 * 359.97438 * 5 4 2 34 34 H 1.09009 * 109.46798 * 59.99553 * 10 9 8 35 35 H 1.08998 * 109.46844 * 300.00057 * 10 9 8 36 36 H 0.97000 * 119.99894 * 359.71837 * 13 11 10 37 37 H 1.09001 * 113.61644 * 203.66224 * 16 14 13 38 38 H 1.09007 * 113.61035 * 334.56829 * 16 14 13 39 39 H 1.08000 * 119.98803 * 0.02562 * 20 19 17 40 40 H 1.08001 * 120.01061 * 180.24830 * 21 20 19 41 41 H 1.08004 * 120.01334 * 180.02562 * 24 22 21 42 42 H 1.08000 * 119.99201 * 180.02562 * 25 24 22 43 43 H 1.09005 * 113.60893 * 25.43122 * 26 14 13 44 44 H 1.08996 * 113.61698 * 156.25165 * 26 14 13 45 45 H 1.08002 * 120.02209 * 180.23516 * 27 8 6 46 46 H 1.08004 * 119.96061 * 180.02562 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6390 -0.0111 2.1903 6 6 3.0958 -0.6593 3.3226 7 35 4.0570 0.2991 4.6392 8 6 2.8528 -2.0155 3.4896 9 8 3.3048 -2.6566 4.5996 10 6 3.0126 -4.0512 4.7075 11 6 3.5888 -4.5872 5.9928 12 8 4.1907 -3.8477 6.7423 13 7 3.4403 -5.8895 6.3064 14 6 4.0056 -6.4118 7.5529 15 1 4.8365 -5.8123 7.9248 16 6 2.9479 -6.7322 8.6223 17 6 2.8663 -8.1394 8.0073 18 1 2.1345 -8.2245 7.2040 19 6 2.7430 -9.2391 9.0303 20 6 3.4382 -9.1547 10.2222 21 6 3.3221 -10.1603 11.1631 22 6 2.5173 -11.2575 10.9072 23 9 2.4067 -12.2433 11.8243 24 6 1.8256 -11.3434 9.7109 25 6 1.9387 -10.3339 8.7739 26 6 4.3047 -7.9196 7.5096 27 6 2.1427 -2.7144 2.5243 28 6 1.6840 -2.0606 1.3972 29 1 -0.3934 0.4417 0.7650 30 1 1.7923 -0.5138 -0.8900 31 1 1.5615 2.4679 -1.2084 32 1 1.5878 2.4586 1.2243 33 1 2.8316 1.0433 2.0574 34 1 3.4536 -4.5812 3.8632 35 1 1.9325 -4.1975 4.7042 36 1 2.9592 -6.4810 5.7067 37 1 3.3387 -6.7224 9.6398 38 1 2.0295 -6.1549 8.5149 39 1 4.0690 -8.3007 10.4200 40 1 3.8621 -10.0922 12.0959 41 1 1.1972 -12.1986 9.5104 42 1 1.3990 -10.4004 7.8408 43 1 4.4817 -8.3008 6.5038 44 1 5.0675 -8.2341 8.2218 45 1 1.9491 -3.7690 2.6537 46 1 1.1307 -2.6045 0.6458 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466350_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:20 Heat of formation + Delta-G solvation = -52.148317 kcal Electronic energy + Delta-G solvation = -31659.986246 eV Core-core repulsion = 26864.673763 eV Total energy + Delta-G solvation = -4795.312484 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 436.052 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -49.91941 -41.80285 -41.34087 -40.30366 -39.24221 -38.50623 -37.31690 -34.63924 -33.48893 -32.16325 -32.11620 -31.52062 -30.41852 -29.41003 -26.67593 -26.45907 -25.83969 -24.21333 -23.93668 -22.73069 -22.40760 -21.82914 -20.22350 -19.51613 -18.81026 -18.56193 -18.15295 -17.56931 -17.44091 -17.26865 -16.80327 -16.62925 -16.61061 -16.42663 -16.20736 -15.70667 -15.64091 -15.48211 -15.35354 -14.82602 -14.75933 -14.46884 -14.30085 -14.23346 -14.03246 -13.93183 -13.84560 -13.65270 -13.40174 -13.37356 -12.91387 -12.41865 -12.35262 -12.18432 -12.18233 -11.86061 -11.84548 -11.72370 -11.65364 -11.22278 -11.19248 -11.00093 -10.62687 -10.15018 -10.05651 -9.98780 -9.47668 -9.31200 -4.94971 -0.01689 0.09468 0.12602 0.27475 0.65233 1.28752 1.40651 1.45505 1.56202 1.92573 2.40594 2.50435 2.56319 3.30673 3.42164 3.47833 3.48652 3.53596 3.67540 3.71312 3.79460 3.83707 3.85554 3.96296 3.98273 4.04851 4.09818 4.10316 4.22763 4.33093 4.35515 4.42920 4.50541 4.65506 4.68918 4.79954 4.80747 4.86539 4.90926 5.03403 5.05124 5.05505 5.06539 5.15626 5.19826 5.29155 5.31608 5.46342 5.50952 5.66430 5.93161 6.07207 6.46698 6.47860 7.15817 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.061 4.061 3 Si 0.735 3.265 4 C -0.148 4.148 5 C -0.057 4.057 6 C -0.141 4.141 7 Br -0.051 7.051 8 C 0.151 3.849 9 O -0.305 6.305 10 C 0.033 3.967 11 C 0.515 3.485 12 O -0.567 6.567 13 N -0.691 5.691 14 C 0.115 3.885 15 H 0.082 0.918 16 C -0.146 4.146 17 C -0.062 4.062 18 H 0.122 0.878 19 C -0.081 4.081 20 C -0.092 4.092 21 C -0.161 4.161 22 C 0.063 3.937 23 F -0.157 7.157 24 C -0.160 4.160 25 C -0.086 4.086 26 C -0.124 4.124 27 C -0.194 4.194 28 C -0.032 4.032 29 H 0.386 0.614 30 H 0.138 0.862 31 H -0.297 1.297 32 H -0.287 1.287 33 H 0.144 0.856 34 H 0.132 0.868 35 H 0.129 0.871 36 H 0.422 0.578 37 H 0.094 0.906 38 H 0.070 0.930 39 H 0.147 0.853 40 H 0.140 0.860 41 H 0.143 0.857 42 H 0.158 0.842 43 H 0.094 0.906 44 H 0.098 0.902 45 H 0.174 0.826 46 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.580 -5.252 -6.163 8.250 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.172 4.172 3 Si 0.642 3.358 4 C -0.150 4.150 5 C -0.077 4.077 6 C -0.221 4.221 7 Br 0.034 6.966 8 C 0.103 3.897 9 O -0.217 6.217 10 C -0.044 4.044 11 C 0.301 3.699 12 O -0.445 6.445 13 N -0.346 5.346 14 C 0.010 3.990 15 H 0.100 0.900 16 C -0.184 4.184 17 C -0.080 4.080 18 H 0.140 0.860 19 C -0.081 4.081 20 C -0.110 4.110 21 C -0.180 4.180 22 C 0.044 3.956 23 F -0.136 7.136 24 C -0.179 4.179 25 C -0.104 4.104 26 C -0.162 4.162 27 C -0.213 4.213 28 C -0.050 4.050 29 H 0.236 0.764 30 H 0.155 0.845 31 H -0.224 1.224 32 H -0.214 1.214 33 H 0.161 0.839 34 H 0.150 0.850 35 H 0.147 0.853 36 H 0.260 0.740 37 H 0.112 0.888 38 H 0.089 0.911 39 H 0.165 0.835 40 H 0.157 0.843 41 H 0.161 0.839 42 H 0.176 0.824 43 H 0.112 0.888 44 H 0.117 0.883 45 H 0.192 0.808 46 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -0.786 -3.804 -5.469 6.708 hybrid contribution -1.450 -0.702 0.769 1.785 sum -2.236 -4.506 -4.700 6.884 Atomic orbital electron populations 1.86582 1.18151 1.80122 1.50262 1.24889 0.83469 1.10258 0.98557 0.94301 0.90984 0.73896 0.76642 1.20210 1.01954 0.95539 0.97285 1.20954 0.95560 1.00100 0.91044 1.21132 1.09482 0.93112 0.98348 1.96774 1.73385 1.73444 1.53014 1.18804 0.93574 0.90510 0.86853 1.86244 1.73391 1.23480 1.38584 1.22845 1.03935 0.80432 0.97230 1.20499 0.79488 0.82663 0.87280 1.90795 1.42480 1.58377 1.52831 1.45313 1.57373 1.08638 1.23241 1.21842 0.96719 0.95677 0.84788 0.89980 1.23586 0.99736 0.95854 0.99230 1.21628 0.98675 0.91058 0.96610 0.85952 1.19982 0.96692 0.96093 0.95374 1.21120 0.98944 0.98225 0.92697 1.21355 1.00540 0.93993 1.02121 1.18144 1.01270 0.87542 0.88636 1.91470 1.95099 1.60958 1.66032 1.21411 1.01450 1.01980 0.93032 1.21243 0.97660 0.92007 0.99493 1.23386 0.96429 0.92664 1.03711 1.21619 1.02566 1.02405 0.94712 1.21232 0.94374 0.93038 0.96392 0.76447 0.84453 1.22438 1.21400 0.83881 0.85024 0.85296 0.73961 0.88752 0.91138 0.83496 0.84257 0.83875 0.82430 0.88765 0.88325 0.80825 0.82493 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.57 12.83 -148.98 -1.91 -1.34 16 2 C -0.06 0.23 2.80 71.24 0.20 0.43 16 3 Si 0.74 -1.48 29.88 68.60 2.05 0.57 16 4 C -0.15 0.45 5.35 -19.85 -0.11 0.34 16 5 C -0.06 -0.01 8.40 22.27 0.19 0.18 16 6 C -0.14 -0.53 6.24 22.40 0.14 -0.39 16 7 Br -0.05 -0.39 33.16 -20.37 -0.68 -1.07 16 8 C 0.15 0.14 6.68 22.52 0.15 0.29 16 9 O -0.30 -0.98 9.00 -73.61 -0.66 -1.64 16 10 C 0.03 -0.22 5.22 71.24 0.37 0.15 16 11 C 0.51 -0.18 7.91 87.66 0.69 0.51 16 12 O -0.57 -6.85 16.10 16.00 0.26 -6.59 16 13 N -0.69 5.38 5.26 -440.02 -2.32 3.06 16 14 C 0.12 -0.61 4.32 45.52 0.20 -0.41 16 15 H 0.08 0.05 7.46 -2.39 -0.02 0.04 16 16 C -0.15 0.87 7.25 31.12 0.23 1.10 16 17 C -0.06 0.58 3.86 -11.01 -0.04 0.54 16 18 H 0.12 -1.65 8.09 -2.39 -0.02 -1.67 16 19 C -0.08 0.41 5.29 -19.86 -0.11 0.30 16 20 C -0.09 0.27 8.60 22.26 0.19 0.46 16 21 C -0.16 -0.12 10.03 22.31 0.22 0.10 16 22 C 0.06 0.23 7.30 22.38 0.16 0.39 16 23 F -0.16 -1.19 17.27 44.97 0.78 -0.41 16 24 C -0.16 0.06 10.03 22.31 0.22 0.28 16 25 C -0.09 0.40 9.71 22.26 0.22 0.61 16 26 C -0.12 1.16 7.29 31.12 0.23 1.39 16 27 C -0.19 1.15 9.04 22.36 0.20 1.35 16 28 C -0.03 0.18 9.68 22.26 0.22 0.39 16 29 H 0.39 -2.20 8.70 -74.06 -0.64 -2.84 16 30 H 0.14 -0.93 7.96 -2.39 -0.02 -0.95 16 31 H -0.30 -1.58 7.11 99.48 0.71 -0.87 16 32 H -0.29 -0.84 7.01 99.48 0.70 -0.14 16 33 H 0.14 -0.16 4.83 -2.91 -0.01 -0.17 16 34 H 0.13 -1.79 7.66 -2.38 -0.02 -1.81 16 35 H 0.13 -1.71 7.66 -2.39 -0.02 -1.73 16 36 H 0.42 -6.66 8.70 -92.71 -0.81 -7.46 16 37 H 0.09 -0.51 6.32 -2.39 -0.02 -0.52 16 38 H 0.07 -0.31 8.14 -2.38 -0.02 -0.33 16 39 H 0.15 -0.93 6.67 -2.91 -0.02 -0.95 16 40 H 0.14 -0.15 8.06 -2.91 -0.02 -0.18 16 41 H 0.14 -0.41 8.06 -2.91 -0.02 -0.43 16 42 H 0.16 -1.61 8.05 -2.91 -0.02 -1.63 16 43 H 0.09 -1.11 8.14 -2.38 -0.02 -1.13 16 44 H 0.10 -0.83 7.72 -2.39 -0.02 -0.85 16 45 H 0.17 -2.37 6.30 -2.91 -0.02 -2.39 16 46 H 0.16 -1.46 8.06 -2.91 -0.02 -1.49 16 Total: 0.00 -27.64 409.20 0.73 -26.90 By element: Atomic # 1 Polarization: -27.16 SS G_CDS: -0.36 Total: -27.51 kcal Atomic # 6 Polarization: 4.46 SS G_CDS: 3.57 Total: 8.03 kcal Atomic # 7 Polarization: 5.38 SS G_CDS: -2.32 Total: 3.06 kcal Atomic # 8 Polarization: -7.25 SS G_CDS: -2.32 Total: -9.57 kcal Atomic # 9 Polarization: -1.19 SS G_CDS: 0.78 Total: -0.41 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: 2.05 Total: 0.57 kcal Atomic # 35 Polarization: -0.39 SS G_CDS: -0.68 Total: -1.07 kcal Total: -27.64 0.73 -26.90 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.246 kcal (2) G-P(sol) polarization free energy of solvation -27.635 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.882 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.733 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.902 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.148 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds