Wall clock time and date at job start Tue Mar 9 2021 12:56:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86304 * 109.47253 * 2 1 4 4 C 1.50698 * 109.46989 * 119.99940 * 2 1 3 5 5 C 1.35457 * 125.56365 * 245.02153 * 4 2 1 6 6 C 1.39833 * 107.86555 * 179.97438 * 5 4 2 7 7 C 1.37869 * 107.08723 * 0.02562 * 6 5 4 8 8 C 1.46680 * 126.23712 * 179.97438 * 7 6 5 9 9 O 1.21699 * 119.99556 * 0.03130 * 8 7 6 10 10 N 1.34773 * 120.00159 * 180.02562 * 8 7 6 11 11 C 1.46500 * 120.00071 * 180.02562 * 10 8 7 12 12 H 1.08999 * 112.84640 * 336.19080 * 11 10 8 13 13 C 1.53778 * 113.69512 * 107.46146 * 11 10 8 14 14 C 1.53784 * 87.08081 * 89.12825 * 13 11 10 15 15 H 1.09004 * 113.61451 * 270.88641 * 14 13 11 16 16 C 1.50692 * 113.61665 * 139.98095 * 14 13 11 17 17 C 1.38249 * 119.97451 * 322.22876 * 16 14 13 18 18 C 1.38200 * 120.02573 * 179.76678 * 17 16 14 19 19 C 1.38457 * 119.97173 * 0.50189 * 18 17 16 20 20 F 1.35100 * 120.02085 * 179.76596 * 19 18 17 21 21 C 1.38457 * 119.95226 * 359.75152 * 19 18 17 22 22 C 1.38196 * 119.97075 * 359.97438 * 21 19 18 23 23 C 1.53778 * 113.61391 * 205.00280 * 11 10 8 24 24 N 1.35535 * 125.56593 * 65.29456 * 4 2 1 25 25 H 0.96698 * 113.99743 * 300.00303 * 1 2 3 26 26 H 1.08998 * 109.47385 * 239.99988 * 2 1 3 27 27 H 1.48504 * 109.99830 * 300.00109 * 3 2 1 28 28 H 1.48500 * 109.99997 * 61.31808 * 3 2 1 29 29 H 1.08006 * 126.06627 * 359.93497 * 5 4 2 30 30 H 1.08005 * 126.45732 * 180.02562 * 6 5 4 31 31 H 0.97005 * 119.99999 * 0.02562 * 10 8 7 32 32 H 1.08993 * 113.61229 * 334.58149 * 13 11 10 33 33 H 1.09000 * 113.61263 * 203.67798 * 13 11 10 34 34 H 1.07999 * 119.98315 * 0.02562 * 17 16 14 35 35 H 1.08005 * 120.01166 * 180.25677 * 18 17 16 36 36 H 1.07996 * 120.01541 * 180.02562 * 21 19 18 37 37 H 1.08006 * 119.98254 * 180.02562 * 22 21 19 38 38 H 1.08998 * 113.61879 * 156.24852 * 23 11 10 39 39 H 1.08999 * 113.61887 * 25.33959 * 23 11 10 40 40 H 0.96993 * 125.67709 * 0.06897 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6326 -0.1392 2.2388 6 6 2.9068 -1.1307 3.1860 7 6 2.3533 -2.3031 2.7171 8 6 2.3944 -3.6088 3.3840 9 8 2.9573 -3.7268 4.4565 10 7 1.8087 -4.6779 2.8091 11 6 1.8493 -5.9819 3.4755 12 1 2.6836 -6.0762 4.1706 13 6 0.4991 -6.4136 4.0715 14 6 0.1937 -7.0596 2.7097 15 1 -0.2907 -6.3839 2.0047 16 6 -0.5008 -8.3927 2.8161 17 6 -0.1539 -9.2739 3.8233 18 6 -0.7935 -10.4948 3.9248 19 6 -1.7748 -10.8395 3.0109 20 9 -2.3974 -12.0347 3.1064 21 6 -2.1178 -9.9585 1.9995 22 6 -1.4808 -8.7358 1.9035 23 6 1.7144 -7.1714 2.5102 24 7 1.7596 -2.0262 1.5064 25 1 -0.3933 0.4417 0.7650 26 1 1.7924 -0.5138 -0.8900 27 1 1.5615 2.4679 -1.2085 28 1 1.5879 2.4586 1.2242 29 1 2.9281 0.8978 2.3001 30 1 3.4500 -1.0023 4.1106 31 1 1.3603 -4.5839 1.9540 32 1 -0.1574 -5.5785 4.3156 33 1 0.5910 -7.1330 4.8852 34 1 0.6144 -9.0063 4.5336 35 1 -0.5251 -11.1813 4.7142 36 1 -2.8834 -10.2262 1.2864 37 1 -1.7485 -8.0482 1.1148 38 1 2.1386 -8.0980 2.8970 39 1 2.0390 -6.9481 1.4939 40 1 1.2945 -2.6659 0.9449 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466350_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:30 Heat of formation + Delta-G solvation = -13.550992 kcal Electronic energy + Delta-G solvation = -25008.593869 eV Core-core repulsion = 21091.793134 eV Total energy + Delta-G solvation = -3916.800735 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.121 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -49.82206 -42.59289 -41.54320 -40.05231 -38.66152 -37.90927 -34.71886 -32.29179 -32.21711 -31.69358 -31.06845 -27.26595 -26.91521 -25.93858 -24.25166 -23.53150 -22.61972 -21.66777 -21.18592 -20.34466 -19.95162 -18.77474 -18.29267 -17.53574 -17.18597 -16.82125 -16.77252 -16.53043 -16.34304 -16.05329 -15.54746 -15.50500 -15.24410 -15.00807 -14.65532 -14.56584 -14.40173 -14.16621 -14.05429 -13.97919 -13.85163 -13.67007 -13.54232 -13.00192 -12.40699 -12.36373 -11.99686 -11.94301 -11.84277 -11.41674 -11.27054 -10.91738 -10.27902 -10.15718 -10.12111 -9.54478 -9.32060 -5.01331 0.06412 0.17460 0.30911 1.06748 1.51280 1.55818 1.78419 1.89821 2.09572 2.31993 2.46937 3.15342 3.23634 3.27113 3.47282 3.48794 3.51110 3.66563 3.72507 3.78559 3.86656 3.97861 4.17278 4.17515 4.22790 4.29923 4.36757 4.45421 4.54753 4.66747 4.72331 4.82380 4.86072 4.92006 4.96189 4.97468 5.05088 5.10037 5.18542 5.34463 5.48807 5.55349 5.78166 5.83976 6.13775 6.18563 6.35298 7.05818 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.062 4.062 3 Si 0.718 3.282 4 C 0.025 3.975 5 C -0.199 4.199 6 C -0.096 4.096 7 C -0.051 4.051 8 C 0.593 3.407 9 O -0.521 6.521 10 N -0.715 5.715 11 C 0.120 3.880 12 H 0.110 0.890 13 C -0.144 4.144 14 C -0.073 4.073 15 H 0.097 0.903 16 C -0.083 4.083 17 C -0.087 4.087 18 C -0.150 4.150 19 C 0.095 3.905 20 F -0.139 7.139 21 C -0.151 4.151 22 C -0.087 4.087 23 C -0.135 4.135 24 N -0.524 5.524 25 H 0.381 0.619 26 H 0.119 0.881 27 H -0.256 1.256 28 H -0.255 1.255 29 H 0.151 0.849 30 H 0.153 0.847 31 H 0.395 0.605 32 H 0.076 0.924 33 H 0.098 0.902 34 H 0.134 0.866 35 H 0.137 0.863 36 H 0.136 0.864 37 H 0.131 0.869 38 H 0.101 0.899 39 H 0.077 0.923 40 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.193 1.723 -3.294 3.904 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.171 4.171 3 Si 0.617 3.383 4 C -0.094 4.094 5 C -0.224 4.224 6 C -0.123 4.123 7 C -0.165 4.165 8 C 0.381 3.619 9 O -0.396 6.396 10 N -0.366 5.366 11 C 0.015 3.985 12 H 0.128 0.872 13 C -0.183 4.183 14 C -0.091 4.091 15 H 0.115 0.885 16 C -0.083 4.083 17 C -0.105 4.105 18 C -0.169 4.169 19 C 0.076 3.924 20 F -0.118 7.118 21 C -0.170 4.170 22 C -0.105 4.105 23 C -0.173 4.173 24 N -0.120 5.120 25 H 0.229 0.771 26 H 0.137 0.863 27 H -0.180 1.180 28 H -0.179 1.179 29 H 0.169 0.831 30 H 0.171 0.829 31 H 0.228 0.772 32 H 0.094 0.906 33 H 0.116 0.884 34 H 0.152 0.848 35 H 0.155 0.845 36 H 0.154 0.846 37 H 0.149 0.851 38 H 0.120 0.880 39 H 0.096 0.904 40 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 1.384 1.961 -3.113 3.931 hybrid contribution -1.804 -0.906 -0.210 2.029 sum -0.420 1.056 -3.323 3.512 Atomic orbital electron populations 1.86597 1.17544 1.80231 1.49695 1.24902 0.84065 1.11885 0.96237 0.94216 0.91410 0.72112 0.80571 1.21097 1.04625 0.84165 0.99465 1.20749 1.05936 1.00354 0.95333 1.21346 1.00664 0.90076 1.00198 1.20435 1.10022 0.95827 0.90191 1.17044 0.78180 0.82076 0.84578 1.90882 1.43726 1.84229 1.20729 1.45553 1.57941 1.08722 1.24415 1.21869 0.99328 0.81601 0.95683 0.87207 1.23589 0.97173 1.00945 0.96575 1.21591 0.95143 0.93533 0.98866 0.88454 1.19731 0.96989 0.95905 0.95686 1.20893 0.99255 0.92545 0.97847 1.21195 0.97155 0.98545 0.99969 1.17779 0.94933 0.82216 0.97504 1.91524 1.81179 1.43265 1.95830 1.21192 1.02317 0.94591 0.98897 1.20925 0.95239 0.95729 0.98602 1.23451 0.94835 0.98615 1.00444 1.41949 1.43456 1.09253 1.17381 0.77112 0.86288 1.18040 1.17875 0.83127 0.82892 0.77158 0.90555 0.88368 0.84794 0.84543 0.84631 0.85088 0.88042 0.90413 0.74678 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.48 12.88 -35.23 -0.45 0.02 16 2 C -0.06 0.14 3.08 36.00 0.11 0.25 16 3 Si 0.72 -1.87 30.56 -169.99 -5.19 -7.06 16 4 C 0.02 -0.03 6.46 -81.95 -0.53 -0.56 16 5 C -0.20 0.11 9.32 -39.98 -0.37 -0.26 16 6 C -0.10 -0.11 10.65 -39.12 -0.42 -0.52 16 7 C -0.05 -0.04 7.06 -81.98 -0.58 -0.62 16 8 C 0.59 1.05 7.79 -12.85 -0.10 0.95 16 9 O -0.52 -2.93 16.48 5.19 0.09 -2.84 16 10 N -0.72 1.07 5.26 -54.33 -0.29 0.78 16 11 C 0.12 -0.19 4.32 -67.12 -0.29 -0.48 16 12 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 13 C -0.14 0.28 7.26 -25.92 -0.19 0.09 16 14 C -0.07 0.21 3.86 -90.96 -0.35 -0.14 16 15 H 0.10 -0.37 8.10 -51.93 -0.42 -0.79 16 16 C -0.08 0.11 5.29 -104.62 -0.55 -0.45 16 17 C -0.09 0.09 8.59 -39.59 -0.34 -0.25 16 18 C -0.15 -0.03 10.03 -39.51 -0.40 -0.43 16 19 C 0.09 0.15 7.30 -39.42 -0.29 -0.14 16 20 F -0.14 -0.44 17.27 2.25 0.04 -0.40 16 21 C -0.15 -0.04 10.03 -39.52 -0.40 -0.44 16 22 C -0.09 0.08 9.71 -39.60 -0.38 -0.30 16 23 C -0.14 0.42 7.29 -25.92 -0.19 0.23 16 24 N -0.52 0.85 5.99 -5.69 -0.03 0.82 16 25 H 0.38 -1.24 8.70 45.56 0.40 -0.84 16 26 H 0.12 -0.39 7.96 -51.93 -0.41 -0.81 16 27 H -0.26 -0.17 7.11 56.52 0.40 0.24 16 28 H -0.25 0.11 7.11 56.52 0.40 0.52 16 29 H 0.15 -0.35 6.19 -52.48 -0.32 -0.67 16 30 H 0.15 0.14 8.06 -52.48 -0.42 -0.28 16 31 H 0.39 -1.61 7.83 -40.82 -0.32 -1.93 16 32 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.10 -0.23 6.32 -51.93 -0.33 -0.56 16 34 H 0.13 -0.38 6.67 -52.49 -0.35 -0.73 16 35 H 0.14 -0.15 8.06 -52.48 -0.42 -0.57 16 36 H 0.14 -0.14 8.06 -52.49 -0.42 -0.56 16 37 H 0.13 -0.38 8.06 -52.48 -0.42 -0.81 16 38 H 0.10 -0.32 7.71 -51.93 -0.40 -0.72 16 39 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 40 H 0.42 -1.66 8.19 -40.82 -0.33 -2.00 16 LS Contribution 344.33 15.07 5.19 5.19 Total: 0.00 -8.08 344.33 -10.53 -18.62 By element: Atomic # 1 Polarization: -7.45 SS G_CDS: -4.62 Total: -12.07 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: -5.26 Total: -3.06 kcal Atomic # 7 Polarization: 1.92 SS G_CDS: -0.32 Total: 1.60 kcal Atomic # 8 Polarization: -2.45 SS G_CDS: -0.37 Total: -2.82 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: -1.87 SS G_CDS: -5.19 Total: -7.06 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -8.08 -10.53 -18.62 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.068 kcal (2) G-P(sol) polarization free energy of solvation -8.085 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.017 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.534 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.619 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.551 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds