Wall clock time and date at job start Tue Mar 9 2021 12:56:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86304 * 109.47253 * 2 1 4 4 C 1.50698 * 109.46989 * 119.99940 * 2 1 3 5 5 C 1.35457 * 125.56365 * 245.02153 * 4 2 1 6 6 C 1.39833 * 107.86555 * 179.97438 * 5 4 2 7 7 C 1.37869 * 107.08723 * 0.02562 * 6 5 4 8 8 C 1.46680 * 126.23712 * 179.97438 * 7 6 5 9 9 O 1.21699 * 119.99556 * 0.03130 * 8 7 6 10 10 N 1.34773 * 120.00159 * 180.02562 * 8 7 6 11 11 C 1.46500 * 120.00071 * 180.02562 * 10 8 7 12 12 H 1.08999 * 112.84640 * 336.19080 * 11 10 8 13 13 C 1.53778 * 113.69512 * 107.46146 * 11 10 8 14 14 C 1.53784 * 87.08081 * 89.12825 * 13 11 10 15 15 H 1.09004 * 113.61451 * 270.88641 * 14 13 11 16 16 C 1.50692 * 113.61665 * 139.98095 * 14 13 11 17 17 C 1.38249 * 119.97451 * 322.22876 * 16 14 13 18 18 C 1.38200 * 120.02573 * 179.76678 * 17 16 14 19 19 C 1.38457 * 119.97173 * 0.50189 * 18 17 16 20 20 F 1.35100 * 120.02085 * 179.76596 * 19 18 17 21 21 C 1.38457 * 119.95226 * 359.75152 * 19 18 17 22 22 C 1.38196 * 119.97075 * 359.97438 * 21 19 18 23 23 C 1.53778 * 113.61391 * 205.00280 * 11 10 8 24 24 N 1.35535 * 125.56593 * 65.29456 * 4 2 1 25 25 H 0.96698 * 113.99743 * 300.00303 * 1 2 3 26 26 H 1.08998 * 109.47385 * 239.99988 * 2 1 3 27 27 H 1.48504 * 109.99830 * 300.00109 * 3 2 1 28 28 H 1.48500 * 109.99997 * 61.31808 * 3 2 1 29 29 H 1.08006 * 126.06627 * 359.93497 * 5 4 2 30 30 H 1.08005 * 126.45732 * 180.02562 * 6 5 4 31 31 H 0.97005 * 119.99999 * 0.02562 * 10 8 7 32 32 H 1.08993 * 113.61229 * 334.58149 * 13 11 10 33 33 H 1.09000 * 113.61263 * 203.67798 * 13 11 10 34 34 H 1.07999 * 119.98315 * 0.02562 * 17 16 14 35 35 H 1.08005 * 120.01166 * 180.25677 * 18 17 16 36 36 H 1.07996 * 120.01541 * 180.02562 * 21 19 18 37 37 H 1.08006 * 119.98254 * 180.02562 * 22 21 19 38 38 H 1.08998 * 113.61879 * 156.24852 * 23 11 10 39 39 H 1.08999 * 113.61887 * 25.33959 * 23 11 10 40 40 H 0.96993 * 125.67709 * 0.06897 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6326 -0.1392 2.2388 6 6 2.9068 -1.1307 3.1860 7 6 2.3533 -2.3031 2.7171 8 6 2.3944 -3.6088 3.3840 9 8 2.9573 -3.7268 4.4565 10 7 1.8087 -4.6779 2.8091 11 6 1.8493 -5.9819 3.4755 12 1 2.6836 -6.0762 4.1706 13 6 0.4991 -6.4136 4.0715 14 6 0.1937 -7.0596 2.7097 15 1 -0.2907 -6.3839 2.0047 16 6 -0.5008 -8.3927 2.8161 17 6 -0.1539 -9.2739 3.8233 18 6 -0.7935 -10.4948 3.9248 19 6 -1.7748 -10.8395 3.0109 20 9 -2.3974 -12.0347 3.1064 21 6 -2.1178 -9.9585 1.9995 22 6 -1.4808 -8.7358 1.9035 23 6 1.7144 -7.1714 2.5102 24 7 1.7596 -2.0262 1.5064 25 1 -0.3933 0.4417 0.7650 26 1 1.7924 -0.5138 -0.8900 27 1 1.5615 2.4679 -1.2085 28 1 1.5879 2.4586 1.2242 29 1 2.9281 0.8978 2.3001 30 1 3.4500 -1.0023 4.1106 31 1 1.3603 -4.5839 1.9540 32 1 -0.1574 -5.5785 4.3156 33 1 0.5910 -7.1330 4.8852 34 1 0.6144 -9.0063 4.5336 35 1 -0.5251 -11.1813 4.7142 36 1 -2.8834 -10.2262 1.2864 37 1 -1.7485 -8.0482 1.1148 38 1 2.1386 -8.0980 2.8970 39 1 2.0390 -6.9481 1.4939 40 1 1.2945 -2.6659 0.9449 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466350_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:29 Heat of formation + Delta-G solvation = -11.773470 kcal Electronic energy + Delta-G solvation = -25008.516790 eV Core-core repulsion = 21091.793134 eV Total energy + Delta-G solvation = -3916.723656 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.121 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -49.94008 -42.55351 -41.44238 -40.08097 -38.63729 -37.80298 -34.74062 -32.23307 -32.14454 -31.65870 -30.99791 -27.19677 -26.73119 -25.83507 -24.18035 -23.50413 -22.57285 -21.59793 -21.17960 -20.25518 -19.87104 -18.76799 -18.22630 -17.47977 -17.19791 -16.73281 -16.68472 -16.64102 -16.28892 -16.04860 -15.47651 -15.47288 -15.16697 -14.95228 -14.56665 -14.48281 -14.37108 -14.14334 -14.00613 -13.94150 -13.76776 -13.56942 -13.44301 -12.95543 -12.33272 -12.24345 -11.92114 -11.87277 -11.71888 -11.37657 -11.26893 -10.82379 -10.27216 -10.09346 -10.06897 -9.51321 -9.28728 -4.82039 0.09392 0.24388 0.29210 1.23512 1.54748 1.70443 1.88183 1.97714 2.22190 2.25805 2.53057 3.27765 3.36618 3.41423 3.60103 3.62451 3.65602 3.78914 3.80500 3.93311 3.94081 4.16314 4.26031 4.29782 4.32063 4.38950 4.51911 4.60460 4.75109 4.80952 4.85131 4.96478 4.98081 5.00611 5.02338 5.09125 5.12336 5.16199 5.25645 5.42866 5.58231 5.61834 5.79285 5.89866 6.27667 6.41189 6.45594 7.02938 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.061 4.061 3 Si 0.792 3.208 4 C 0.033 3.967 5 C -0.206 4.206 6 C -0.118 4.118 7 C -0.063 4.063 8 C 0.591 3.409 9 O -0.569 6.569 10 N -0.699 5.699 11 C 0.114 3.886 12 H 0.090 0.910 13 C -0.144 4.144 14 C -0.064 4.064 15 H 0.114 0.886 16 C -0.082 4.082 17 C -0.090 4.090 18 C -0.159 4.159 19 C 0.065 3.935 20 F -0.156 7.156 21 C -0.160 4.160 22 C -0.089 4.089 23 C -0.124 4.124 24 N -0.511 5.511 25 H 0.390 0.610 26 H 0.136 0.864 27 H -0.299 1.299 28 H -0.283 1.283 29 H 0.165 0.835 30 H 0.145 0.855 31 H 0.410 0.590 32 H 0.066 0.934 33 H 0.101 0.899 34 H 0.150 0.850 35 H 0.142 0.858 36 H 0.143 0.857 37 H 0.154 0.846 38 H 0.104 0.896 39 H 0.089 0.911 40 H 0.428 0.572 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.105 2.153 -4.720 5.304 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.170 4.170 3 Si 0.696 3.304 4 C -0.086 4.086 5 C -0.230 4.230 6 C -0.145 4.145 7 C -0.176 4.176 8 C 0.380 3.620 9 O -0.448 6.448 10 N -0.350 5.350 11 C 0.009 3.991 12 H 0.108 0.892 13 C -0.182 4.182 14 C -0.082 4.082 15 H 0.132 0.868 16 C -0.082 4.082 17 C -0.108 4.108 18 C -0.178 4.178 19 C 0.046 3.954 20 F -0.135 7.135 21 C -0.179 4.179 22 C -0.106 4.106 23 C -0.162 4.162 24 N -0.108 5.108 25 H 0.239 0.761 26 H 0.154 0.846 27 H -0.227 1.227 28 H -0.209 1.209 29 H 0.182 0.818 30 H 0.163 0.837 31 H 0.246 0.754 32 H 0.085 0.915 33 H 0.119 0.881 34 H 0.168 0.832 35 H 0.160 0.840 36 H 0.161 0.839 37 H 0.172 0.828 38 H 0.123 0.877 39 H 0.108 0.892 40 H 0.268 0.732 Dipole moment (debyes) X Y Z Total from point charges 1.273 2.350 -4.573 5.297 hybrid contribution -1.800 -0.970 0.219 2.056 sum -0.528 1.381 -4.354 4.598 Atomic orbital electron populations 1.86579 1.18094 1.80495 1.50451 1.25033 0.83598 1.12035 0.96362 0.93300 0.90257 0.70325 0.76549 1.21242 1.03775 0.84143 0.99403 1.20945 1.06127 1.00844 0.95094 1.21489 1.01315 0.91050 1.00606 1.20274 1.10917 0.95325 0.91118 1.17219 0.77768 0.82926 0.84067 1.90853 1.46083 1.85000 1.22851 1.45413 1.56830 1.08062 1.24653 1.21905 0.98979 0.82022 0.96236 0.89163 1.23586 0.96540 1.00781 0.97320 1.21596 0.95229 0.92856 0.98489 0.86770 1.19943 0.96683 0.96312 0.95239 1.21127 0.99352 0.92068 0.98274 1.21371 0.97098 0.99311 1.00023 1.18127 0.96101 0.82259 0.98941 1.91473 1.81647 1.44290 1.96049 1.21392 1.02743 0.94963 0.98770 1.21214 0.94808 0.95499 0.99114 1.23399 0.94480 0.97728 1.00565 1.41883 1.42822 1.09488 1.16645 0.76064 0.84631 1.22732 1.20921 0.81757 0.83720 0.75380 0.91474 0.88105 0.83220 0.83976 0.83900 0.82823 0.87737 0.89223 0.73194 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.76 12.88 -148.98 -1.92 -0.16 16 2 C -0.06 0.37 3.08 71.24 0.22 0.59 16 3 Si 0.79 -4.58 30.56 68.60 2.10 -2.49 16 4 C 0.03 -0.13 6.46 41.34 0.27 0.14 16 5 C -0.21 0.31 9.32 22.01 0.21 0.51 16 6 C -0.12 -0.34 10.65 22.57 0.24 -0.10 16 7 C -0.06 -0.10 7.06 40.35 0.28 0.18 16 8 C 0.59 2.47 7.79 86.45 0.67 3.15 16 9 O -0.57 -7.44 16.48 -4.35 -0.07 -7.51 16 10 N -0.70 2.41 5.26 -444.00 -2.34 0.07 16 11 C 0.11 -0.38 4.32 45.52 0.20 -0.18 16 12 H 0.09 0.11 7.46 -2.39 -0.02 0.09 16 13 C -0.14 0.64 7.26 31.12 0.23 0.87 16 14 C -0.06 0.47 3.86 -11.01 -0.04 0.43 16 15 H 0.11 -1.18 8.10 -2.39 -0.02 -1.20 16 16 C -0.08 0.31 5.29 -19.86 -0.11 0.20 16 17 C -0.09 0.23 8.59 22.26 0.19 0.42 16 18 C -0.16 -0.15 10.03 22.31 0.22 0.07 16 19 C 0.06 0.26 7.30 22.37 0.16 0.42 16 20 F -0.16 -1.22 17.27 44.97 0.78 -0.44 16 21 C -0.16 -0.09 10.03 22.31 0.22 0.14 16 22 C -0.09 0.28 9.71 22.26 0.22 0.50 16 23 C -0.12 0.95 7.29 31.12 0.23 1.18 16 24 N -0.51 2.23 5.99 -171.92 -1.03 1.20 16 25 H 0.39 -2.96 8.70 -74.06 -0.64 -3.61 16 26 H 0.14 -1.22 7.96 -2.39 -0.02 -1.24 16 27 H -0.30 -0.53 7.11 99.48 0.71 0.18 16 28 H -0.28 0.29 7.11 99.48 0.71 1.00 16 29 H 0.17 -0.85 6.19 -2.91 -0.02 -0.86 16 30 H 0.14 0.54 8.06 -2.91 -0.02 0.52 16 31 H 0.41 -3.98 7.83 -92.70 -0.73 -4.71 16 32 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 33 H 0.10 -0.50 6.32 -2.39 -0.02 -0.52 16 34 H 0.15 -0.94 6.67 -2.91 -0.02 -0.96 16 35 H 0.14 -0.18 8.06 -2.91 -0.02 -0.20 16 36 H 0.14 -0.27 8.06 -2.91 -0.02 -0.29 16 37 H 0.15 -1.26 8.06 -2.91 -0.02 -1.28 16 38 H 0.10 -0.81 7.71 -2.39 -0.02 -0.82 16 39 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 40 H 0.43 -4.22 8.19 -92.71 -0.76 -4.98 16 Total: 0.00 -20.69 344.33 -0.05 -20.74 By element: Atomic # 1 Polarization: -18.94 SS G_CDS: -0.98 Total: -19.92 kcal Atomic # 6 Polarization: 5.10 SS G_CDS: 3.41 Total: 8.51 kcal Atomic # 7 Polarization: 4.63 SS G_CDS: -3.37 Total: 1.27 kcal Atomic # 8 Polarization: -5.68 SS G_CDS: -1.99 Total: -7.67 kcal Atomic # 9 Polarization: -1.22 SS G_CDS: 0.78 Total: -0.44 kcal Atomic # 14 Polarization: -4.58 SS G_CDS: 2.10 Total: -2.49 kcal Total: -20.69 -0.05 -20.74 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.968 kcal (2) G-P(sol) polarization free energy of solvation -20.692 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.724 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.050 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.742 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.773 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds