Wall clock time and date at job start Tue Mar 9 2021 12:56:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86302 * 109.47346 * 2 1 4 4 C 1.50701 * 109.47159 * 239.99692 * 2 1 3 5 5 C 1.34237 * 126.49653 * 105.35885 * 4 2 1 6 6 N 1.36831 * 109.93415 * 180.13665 * 5 4 2 7 7 C 1.46505 * 125.06217 * 179.81485 * 6 5 4 8 8 C 1.50703 * 109.47064 * 264.69680 * 7 6 5 9 9 O 1.21278 * 119.99985 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00161 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00271 * 180.02562 * 10 8 7 12 12 H 1.09003 * 112.84993 * 336.19005 * 11 10 8 13 13 C 1.53781 * 113.61614 * 107.49783 * 11 10 8 14 14 C 1.53778 * 87.07849 * 89.11738 * 13 11 10 15 15 H 1.09010 * 113.61773 * 270.88132 * 14 13 11 16 16 C 1.50707 * 113.69334 * 139.99370 * 14 13 11 17 17 C 1.38247 * 119.96876 * 322.18708 * 16 14 13 18 18 C 1.38195 * 120.02284 * 179.76287 * 17 16 14 19 19 C 1.38461 * 119.97397 * 0.51482 * 18 17 16 20 20 F 1.35103 * 120.02558 * 179.76464 * 19 18 17 21 21 C 1.38458 * 119.94743 * 359.73975 * 19 18 17 22 22 C 1.38192 * 119.97625 * 0.02562 * 21 19 18 23 23 C 1.53777 * 87.08604 * 25.43188 * 14 13 11 24 24 C 1.37692 * 109.87806 * 359.55007 * 6 5 4 25 25 C 1.39085 * 133.51788 * 180.29064 * 24 6 5 26 26 C 1.37788 * 119.78065 * 179.97438 * 25 24 6 27 27 C 1.38790 * 120.66457 * 0.02562 * 26 25 24 28 28 C 1.36664 * 120.52841 * 0.02562 * 27 26 25 29 29 C 1.39587 * 119.76402 * 359.94422 * 28 27 26 30 30 H 0.96694 * 114.00215 * 60.00007 * 1 2 3 31 31 H 1.09007 * 109.47078 * 119.99788 * 2 1 3 32 32 H 1.48500 * 109.99849 * 60.00087 * 3 2 1 33 33 H 1.48501 * 109.99999 * 181.31882 * 3 2 1 34 34 H 1.07995 * 125.03237 * 359.96752 * 5 4 2 35 35 H 1.09002 * 109.47068 * 24.69648 * 7 6 5 36 36 H 1.09001 * 109.47372 * 144.69736 * 7 6 5 37 37 H 0.97005 * 119.99463 * 359.97438 * 10 8 7 38 38 H 1.09000 * 113.61467 * 203.66301 * 13 11 10 39 39 H 1.08991 * 113.61330 * 334.57193 * 13 11 10 40 40 H 1.08000 * 119.98755 * 0.02562 * 17 16 14 41 41 H 1.08003 * 120.01593 * 180.25779 * 18 17 16 42 42 H 1.07999 * 120.01246 * 180.02562 * 21 19 18 43 43 H 1.08007 * 119.98974 * 180.02562 * 22 21 19 44 44 H 1.08998 * 113.61996 * 220.01715 * 23 14 13 45 45 H 1.08998 * 113.68961 * 89.12615 * 23 14 13 46 46 H 1.08002 * 120.10989 * 359.93834 * 25 24 6 47 47 H 1.08001 * 119.66775 * 179.97438 * 26 25 24 48 48 H 1.07994 * 119.73514 * 179.97438 * 27 26 25 49 49 H 1.08006 * 120.11721 * 180.02562 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.4669 -0.1381 -2.3201 6 7 2.8039 -1.0991 -3.2340 7 6 3.4095 -0.8406 -4.5427 8 6 2.3305 -0.7840 -5.5932 9 8 1.1699 -0.9443 -5.2796 10 7 2.6552 -0.5563 -6.8813 11 6 1.6062 -0.5007 -7.9024 12 1 0.7056 -1.0429 -7.6140 13 6 1.3316 0.9186 -8.4268 14 6 2.4187 0.6541 -9.4819 15 1 3.4214 0.9286 -9.1540 16 6 2.0813 1.1946 -10.8477 17 6 0.7811 1.1320 -11.3133 18 6 0.4696 1.6316 -12.5635 19 6 1.4623 2.1854 -13.3542 20 9 1.1598 2.6699 -14.5785 21 6 2.7650 2.2428 -12.8888 22 6 3.0733 1.7469 -11.6363 23 6 2.1045 -0.8421 -9.3166 24 6 2.4945 -2.3458 -2.7380 25 6 2.6301 -3.6364 -3.2386 26 6 2.2161 -4.7109 -2.4819 27 6 1.6635 -4.5194 -1.2232 28 6 1.5201 -3.2599 -0.7124 29 6 1.9334 -2.1570 -1.4616 30 1 -0.3933 0.4417 -0.7650 31 1 1.7923 -0.5138 0.8901 32 1 1.5615 2.4679 1.2085 33 1 3.5346 1.7702 -0.0321 34 1 2.6082 0.9238 -2.4566 35 1 3.9406 0.1109 -4.5157 36 1 4.1095 -1.6407 -4.7836 37 1 3.5835 -0.4284 -7.1320 38 1 0.3344 1.0427 -8.8491 39 1 1.5931 1.7042 -7.7180 40 1 0.0078 0.6963 -10.6981 41 1 -0.5469 1.5864 -12.9255 42 1 3.5400 2.6749 -13.5045 43 1 4.0894 1.7919 -11.2729 44 1 2.9898 -1.4779 -9.3260 45 1 1.3189 -1.2007 -9.9816 46 1 3.0579 -3.7957 -4.2173 47 1 2.3218 -5.7122 -2.8725 48 1 1.3437 -5.3723 -0.6432 49 1 1.0896 -3.1185 0.2681 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466350_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:55 Heat of formation + Delta-G solvation = 14.082176 kcal Electronic energy + Delta-G solvation = -33319.795548 eV Core-core repulsion = 28708.439418 eV Total energy + Delta-G solvation = -4611.356130 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.153 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -49.83703 -42.51586 -41.67091 -40.31677 -38.81392 -37.97890 -37.48286 -34.76070 -33.97400 -32.24310 -31.72328 -31.14901 -30.13052 -28.95882 -26.95128 -26.35665 -25.52050 -24.21839 -23.67530 -22.93935 -22.54190 -21.86887 -20.61679 -20.37231 -18.93577 -18.60259 -18.44891 -17.71313 -17.48147 -17.26091 -17.06940 -16.70374 -16.54791 -16.34228 -16.32194 -15.95658 -15.60924 -15.56430 -15.31667 -15.05249 -14.76630 -14.63373 -14.60367 -14.35887 -14.33919 -14.03775 -13.96128 -13.82862 -13.77116 -13.57574 -13.37018 -12.98876 -12.60854 -12.46446 -12.38613 -12.11852 -12.03295 -12.00442 -11.87381 -11.68510 -11.44896 -11.14630 -10.43530 -10.30087 -10.21512 -10.17541 -9.56290 -9.03689 -8.54121 -5.02062 0.04537 0.15652 0.26556 0.77966 1.33162 1.37180 1.38786 1.66594 1.71871 2.02778 2.05357 2.44784 3.09967 3.21046 3.25181 3.37622 3.41607 3.46190 3.53424 3.64409 3.65818 3.74345 3.76126 3.78494 3.84543 3.84887 3.95713 4.07402 4.15533 4.28118 4.30268 4.35783 4.41934 4.51573 4.56994 4.62637 4.70193 4.70259 4.78090 4.78262 4.83672 4.89048 4.89556 4.94920 4.97576 5.08337 5.16646 5.24180 5.31470 5.46686 5.63433 5.79509 5.82166 5.84961 5.88857 6.11440 6.28872 6.35081 6.77896 6.95682 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.029 4.029 3 Si 0.682 3.318 4 C -0.197 4.197 5 C 0.068 3.932 6 N -0.466 5.466 7 C 0.091 3.909 8 C 0.494 3.506 9 O -0.509 6.509 10 N -0.712 5.712 11 C 0.120 3.880 12 H 0.106 0.894 13 C -0.143 4.143 14 C -0.072 4.072 15 H 0.099 0.901 16 C -0.084 4.084 17 C -0.088 4.088 18 C -0.150 4.150 19 C 0.095 3.905 20 F -0.139 7.139 21 C -0.151 4.151 22 C -0.086 4.086 23 C -0.136 4.136 24 C 0.109 3.891 25 C -0.128 4.128 26 C -0.097 4.097 27 C -0.146 4.146 28 C -0.066 4.066 29 C -0.087 4.087 30 H 0.377 0.623 31 H 0.110 0.890 32 H -0.254 1.254 33 H -0.256 1.256 34 H 0.171 0.829 35 H 0.123 0.877 36 H 0.118 0.882 37 H 0.402 0.598 38 H 0.096 0.904 39 H 0.076 0.924 40 H 0.134 0.866 41 H 0.136 0.864 42 H 0.136 0.864 43 H 0.132 0.868 44 H 0.078 0.922 45 H 0.099 0.901 46 H 0.114 0.886 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.644 1.390 -3.617 6.048 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.584 3.416 4 C -0.205 4.205 5 C -0.056 4.056 6 N -0.150 5.150 7 C -0.035 4.035 8 C 0.278 3.722 9 O -0.382 6.382 10 N -0.365 5.365 11 C 0.014 3.986 12 H 0.124 0.876 13 C -0.182 4.182 14 C -0.090 4.090 15 H 0.118 0.882 16 C -0.084 4.084 17 C -0.106 4.106 18 C -0.169 4.169 19 C 0.076 3.924 20 F -0.118 7.118 21 C -0.170 4.170 22 C -0.105 4.105 23 C -0.174 4.174 24 C 0.004 3.996 25 C -0.149 4.149 26 C -0.116 4.116 27 C -0.165 4.165 28 C -0.084 4.084 29 C -0.091 4.091 30 H 0.225 0.775 31 H 0.127 0.873 32 H -0.179 1.179 33 H -0.180 1.180 34 H 0.188 0.812 35 H 0.141 0.859 36 H 0.135 0.865 37 H 0.237 0.763 38 H 0.115 0.885 39 H 0.095 0.905 40 H 0.151 0.849 41 H 0.154 0.846 42 H 0.154 0.846 43 H 0.150 0.850 44 H 0.097 0.903 45 H 0.118 0.882 46 H 0.133 0.867 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 4.485 1.662 -2.720 5.503 hybrid contribution 0.568 -0.364 -0.580 0.889 sum 5.053 1.299 -3.299 6.173 Atomic orbital electron populations 1.86488 1.17417 1.81826 1.48968 1.24329 0.84800 1.08731 0.96220 0.95256 0.80624 0.77872 0.87867 1.20652 1.09540 0.92419 0.97875 1.21501 1.01254 0.93769 0.89110 1.43184 1.53966 1.04654 1.13173 1.21581 0.94519 1.06016 0.81355 1.21012 0.90829 0.76910 0.83441 1.90820 1.19839 1.46952 1.80639 1.45626 1.10513 1.73661 1.06685 1.21867 0.92031 0.97546 0.87136 0.87576 1.23569 0.99518 0.97474 0.97603 1.21589 0.99948 0.95932 0.91543 0.88247 1.19738 0.93387 0.99311 0.95950 1.20889 0.96369 0.98446 0.94854 1.21196 0.99571 1.00936 0.95186 1.17786 0.94129 0.99028 0.81473 1.91526 1.93881 1.85740 1.40649 1.21196 0.95255 1.02852 0.97707 1.20925 0.99505 0.96987 0.93034 1.23441 1.02628 0.95644 0.95651 1.18161 1.01407 0.85835 0.94167 1.19951 1.05337 0.89273 1.00296 1.20826 0.98348 0.97958 0.94447 1.20672 1.02397 0.96943 0.96452 1.20311 0.97876 0.90956 0.99269 1.18944 1.03138 0.92815 0.94173 0.77544 0.87259 1.17888 1.18047 0.81221 0.85879 0.86453 0.76314 0.88531 0.90536 0.84860 0.84572 0.84630 0.85027 0.90340 0.88214 0.86748 0.85730 0.85938 0.85977 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.20 12.88 -35.23 -0.45 -1.66 16 2 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 3 Si 0.68 -0.44 30.75 -169.99 -5.23 -5.67 16 4 C -0.20 -0.43 5.58 -102.71 -0.57 -1.01 16 5 C 0.07 0.02 9.89 -16.73 -0.17 -0.14 16 6 N -0.47 -0.32 2.27 -115.70 -0.26 -0.59 16 7 C 0.09 -0.30 6.48 -5.19 -0.03 -0.33 16 8 C 0.49 -0.55 7.90 -10.98 -0.09 -0.64 16 9 O -0.51 -2.03 16.02 5.56 0.09 -1.94 16 10 N -0.71 2.78 5.26 -53.02 -0.28 2.50 16 11 C 0.12 -0.35 4.32 -67.12 -0.29 -0.64 16 12 H 0.11 -0.06 7.46 -51.93 -0.39 -0.45 16 13 C -0.14 0.47 7.26 -25.92 -0.19 0.28 16 14 C -0.07 0.29 3.85 -90.96 -0.35 -0.06 16 15 H 0.10 -0.52 8.09 -51.92 -0.42 -0.94 16 16 C -0.08 0.18 5.29 -104.61 -0.55 -0.38 16 17 C -0.09 0.14 8.60 -39.59 -0.34 -0.20 16 18 C -0.15 0.04 10.03 -39.51 -0.40 -0.35 16 19 C 0.10 0.10 7.30 -39.42 -0.29 -0.19 16 20 F -0.14 -0.37 17.27 2.25 0.04 -0.34 16 21 C -0.15 0.06 10.03 -39.52 -0.40 -0.34 16 22 C -0.09 0.15 9.71 -39.60 -0.38 -0.23 16 23 C -0.14 0.55 7.29 -25.92 -0.19 0.37 16 24 C 0.11 0.34 6.80 -83.99 -0.57 -0.23 16 25 C -0.13 -0.30 10.00 -39.43 -0.39 -0.69 16 26 C -0.10 -0.20 10.01 -39.54 -0.40 -0.60 16 27 C -0.15 -0.38 9.97 -39.95 -0.40 -0.78 16 28 C -0.07 -0.24 10.05 -39.65 -0.40 -0.64 16 29 C -0.09 -0.35 6.35 -105.14 -0.67 -1.02 16 30 H 0.38 -0.48 8.70 45.56 0.40 -0.08 16 31 H 0.11 0.21 7.96 -51.93 -0.41 -0.20 16 32 H -0.25 -0.68 7.11 56.52 0.40 -0.28 16 33 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 34 H 0.17 -0.56 6.34 -52.49 -0.33 -0.89 16 35 H 0.12 -0.81 8.12 -51.93 -0.42 -1.23 16 36 H 0.12 -0.61 8.14 -51.93 -0.42 -1.03 16 37 H 0.40 -2.77 8.70 -40.82 -0.36 -3.13 16 38 H 0.10 -0.31 6.33 -51.93 -0.33 -0.64 16 39 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 40 H 0.13 -0.44 6.68 -52.49 -0.35 -0.80 16 41 H 0.14 -0.20 8.06 -52.48 -0.42 -0.62 16 42 H 0.14 -0.22 8.06 -52.49 -0.42 -0.64 16 43 H 0.13 -0.51 8.05 -52.48 -0.42 -0.93 16 44 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 45 H 0.10 -0.38 7.72 -51.93 -0.40 -0.78 16 46 H 0.11 0.03 8.06 -52.49 -0.42 -0.39 16 47 H 0.12 -0.01 8.06 -52.49 -0.42 -0.43 16 48 H 0.12 0.09 8.06 -52.49 -0.42 -0.33 16 49 H 0.12 0.35 8.06 -52.48 -0.42 -0.07 16 LS Contribution 415.35 15.07 6.26 6.26 Total: 0.00 -11.18 415.35 -13.23 -24.41 By element: Atomic # 1 Polarization: -8.79 SS G_CDS: -6.44 Total: -15.23 kcal Atomic # 6 Polarization: -0.79 SS G_CDS: -6.95 Total: -7.74 kcal Atomic # 7 Polarization: 2.45 SS G_CDS: -0.54 Total: 1.91 kcal Atomic # 8 Polarization: -3.24 SS G_CDS: -0.36 Total: -3.60 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.04 Total: -0.34 kcal Atomic # 14 Polarization: -0.44 SS G_CDS: -5.23 Total: -5.67 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -11.18 -13.23 -24.41 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.490 kcal (2) G-P(sol) polarization free energy of solvation -11.183 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.308 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.408 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.082 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds