Wall clock time and date at job start Tue Mar 9 2021 13:05:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35898 * 116.99694 * 2 1 4 4 C 1.38715 * 120.05243 * 179.97438 * 3 2 1 5 5 C 1.38166 * 119.94528 * 179.97438 * 4 3 2 6 6 C 1.50695 * 119.97278 * 180.02562 * 5 4 3 7 7 H 1.09003 * 112.85245 * 11.19837 * 6 5 4 8 8 C 1.53778 * 113.61462 * 142.50679 * 6 5 4 9 9 C 1.53785 * 87.08335 * 139.98143 * 8 6 5 10 10 H 1.09001 * 113.61347 * 220.02148 * 9 8 6 11 11 N 1.46492 * 113.69046 * 89.12658 * 9 8 6 12 12 C 1.34780 * 120.00244 * 107.46819 * 11 9 8 13 13 O 1.21642 * 119.99526 * 359.97438 * 12 11 9 14 14 C 1.47053 * 120.00208 * 179.97438 * 12 11 9 15 15 C 1.35863 * 125.42889 * 179.69187 * 14 12 11 16 16 C 1.41597 * 107.73195 * 179.84890 * 15 14 12 17 17 C 1.40064 * 133.38161 * 180.08614 * 16 15 14 18 18 C 1.36469 * 119.83116 * 180.33526 * 17 16 15 19 19 C 1.38907 * 120.61354 * 359.97438 * 18 17 16 20 20 C 1.50693 * 119.67369 * 180.02562 * 19 18 17 21 21 O 1.42906 * 109.47211 * 120.02788 * 20 19 18 22 22 Si 1.86300 * 109.47546 * 0.02562 * 20 19 18 23 23 C 1.37714 * 120.64530 * 0.02562 * 19 18 17 24 24 C 1.39184 * 119.81217 * 359.97400 * 23 19 18 25 25 N 1.37487 * 133.18670 * 179.97438 * 24 23 19 26 26 C 1.53781 * 87.07856 * 334.56713 * 9 8 6 27 27 C 1.38244 * 120.05257 * 0.02562 * 5 4 3 28 28 C 1.38289 * 120.11625 * 359.95507 * 27 5 4 29 29 C 1.38125 * 120.05375 * 0.04238 * 28 27 5 30 30 H 1.08999 * 109.47436 * 180.02562 * 1 2 3 31 31 H 1.08999 * 109.47292 * 300.00273 * 1 2 3 32 32 H 1.08998 * 109.47042 * 60.00021 * 1 2 3 33 33 H 1.08002 * 120.02716 * 359.70556 * 4 3 2 34 34 H 1.09007 * 113.61481 * 254.52830 * 8 6 5 35 35 H 1.08996 * 113.61695 * 25.43100 * 8 6 5 36 36 H 0.97004 * 120.00163 * 287.46184 * 11 9 8 37 37 H 1.08003 * 126.13210 * 0.02562 * 15 14 12 38 38 H 1.08002 * 120.08427 * 0.33798 * 17 16 15 39 39 H 1.07990 * 119.69575 * 179.97438 * 18 17 16 40 40 H 1.09004 * 109.46994 * 240.02230 * 20 19 18 41 41 H 0.96702 * 113.99199 * 299.99610 * 21 20 19 42 42 H 1.48497 * 110.00102 * 179.97438 * 22 20 19 43 43 H 1.48497 * 110.00223 * 301.32254 * 22 20 19 44 44 H 1.08003 * 120.09089 * 180.02562 * 23 19 18 45 45 H 0.97001 * 125.60433 * 0.02562 * 25 24 23 46 46 H 1.09002 * 113.61377 * 270.88505 * 26 9 8 47 47 H 1.09002 * 113.61445 * 139.98473 * 26 9 8 48 48 H 1.08000 * 119.94046 * 179.97438 * 27 5 4 49 49 H 1.07992 * 119.97564 * 180.02562 * 28 27 5 50 50 H 1.07995 * 120.03202 * 180.02562 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4311 1.2848 0.0005 5 6 4.0560 2.5171 0.0000 6 6 5.5608 2.5982 0.0000 7 1 6.0365 1.6369 -0.1946 8 6 6.1158 3.7472 -0.8581 9 6 7.1514 3.9741 0.2558 10 1 7.3471 5.0264 0.4623 11 7 8.3773 3.1897 0.0885 12 6 9.5213 3.7981 -0.2823 13 8 9.5358 4.9985 -0.4786 14 6 10.7520 3.0107 -0.4497 15 6 11.9599 3.5073 -0.8241 16 6 12.8763 2.4286 -0.8635 17 6 14.2388 2.3346 -1.1743 18 6 14.8634 1.1220 -1.1287 19 6 14.1604 -0.0229 -0.7759 20 6 14.8714 -1.3509 -0.7319 21 8 14.7903 -1.8910 0.5887 22 14 16.6597 -1.1137 -1.1971 23 6 12.8203 0.0437 -0.4661 24 6 12.1610 1.2689 -0.5054 25 7 10.8630 1.6473 -0.2563 26 6 6.1380 3.3353 1.2200 27 6 3.3019 3.6758 -0.0005 28 6 1.9208 3.6048 -0.0015 29 6 1.2913 2.3753 -0.0010 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3634 0.5139 0.8899 32 1 -0.3633 0.5138 -0.8900 33 1 4.0206 0.3799 0.0058 34 1 6.5532 3.4167 -1.8003 35 1 5.4187 4.5760 -0.9817 36 1 8.3656 2.2324 0.2447 37 1 12.1821 4.5402 -1.0483 38 1 14.7937 3.2194 -1.4492 39 1 15.9138 1.0520 -1.3691 40 1 14.4011 -2.0383 -1.4351 41 1 15.1900 -1.3307 1.2679 42 1 17.3720 -2.4161 -1.1568 43 1 16.7570 -0.5228 -2.5559 44 1 12.2825 -0.8522 -0.1926 45 1 10.1433 1.0544 0.0111 46 1 5.4469 4.0514 1.6646 47 1 6.5933 2.6722 1.9556 48 1 3.7922 4.6380 -0.0005 49 1 1.3340 4.5113 -0.0023 50 1 0.2128 2.3203 -0.0021 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10812630_13158378.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:25 Heat of formation + Delta-G solvation = 14.760764 kcal Electronic energy + Delta-G solvation = -32522.485970 eV Core-core repulsion = 28061.931049 eV Total energy + Delta-G solvation = -4460.554921 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.162 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.72215 -41.68016 -40.81723 -39.71980 -38.90458 -37.90424 -36.90799 -34.67662 -33.27037 -32.22046 -31.28981 -30.78325 -30.40973 -28.35165 -27.26670 -26.86422 -25.98813 -24.42885 -23.62312 -23.20927 -22.39022 -22.00569 -21.27636 -20.42407 -19.58382 -18.81509 -18.42255 -17.80989 -17.30295 -17.10090 -16.94658 -16.82175 -16.71356 -16.47818 -16.16037 -15.91644 -15.82985 -15.54691 -15.30951 -15.08057 -14.83754 -14.69444 -14.53901 -14.43375 -14.35116 -14.12284 -14.05351 -13.65616 -13.38441 -13.30105 -13.13322 -12.76861 -12.60691 -12.53905 -12.42481 -12.20624 -11.97383 -11.75379 -11.69842 -11.65471 -11.40378 -11.27157 -10.94453 -10.46598 -10.28331 -9.78608 -9.33122 -9.16797 -8.83530 -5.01444 -0.35152 0.29173 0.46776 0.51241 0.98985 1.28923 1.65179 1.73137 1.86809 1.99596 2.23410 2.27354 2.70211 2.77121 3.28673 3.41042 3.50330 3.56201 3.61604 3.63534 3.69629 3.77251 3.82843 3.94841 4.00022 4.09433 4.13500 4.17129 4.23555 4.28097 4.29062 4.40949 4.45719 4.46482 4.48545 4.53864 4.55311 4.58911 4.61238 4.69863 4.82411 4.86949 4.88533 4.95038 4.97599 5.02935 5.27281 5.31040 5.37859 5.40628 5.46210 5.51909 5.60140 5.62421 5.75703 5.95516 6.16933 6.32284 6.40441 6.55068 6.96784 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.130 3.870 4 C -0.149 4.149 5 C -0.033 4.033 6 C -0.075 4.075 7 H 0.097 0.903 8 C -0.142 4.142 9 C 0.119 3.881 10 H 0.111 0.889 11 N -0.712 5.712 12 C 0.588 3.412 13 O -0.514 6.514 14 C 0.012 3.988 15 C -0.098 4.098 16 C -0.117 4.117 17 C -0.050 4.050 18 C -0.146 4.146 19 C -0.088 4.088 20 C -0.068 4.068 21 O -0.541 6.541 22 Si 0.693 3.307 23 C -0.104 4.104 24 C 0.116 3.884 25 N -0.579 5.579 26 C -0.134 4.134 27 C -0.154 4.154 28 C -0.076 4.076 29 C -0.212 4.212 30 H 0.101 0.899 31 H 0.056 0.944 32 H 0.056 0.944 33 H 0.128 0.872 34 H 0.076 0.924 35 H 0.100 0.900 36 H 0.396 0.604 37 H 0.159 0.841 38 H 0.132 0.868 39 H 0.129 0.871 40 H 0.114 0.886 41 H 0.380 0.620 42 H -0.256 1.256 43 H -0.257 1.257 44 H 0.127 0.873 45 H 0.417 0.583 46 H 0.102 0.898 47 H 0.077 0.923 48 H 0.126 0.874 49 H 0.126 0.874 50 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.548 -0.412 2.158 2.687 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.168 4.168 5 C -0.033 4.033 6 C -0.093 4.093 7 H 0.115 0.885 8 C -0.181 4.181 9 C 0.014 3.986 10 H 0.129 0.871 11 N -0.363 5.363 12 C 0.375 3.625 13 O -0.389 6.389 14 C -0.096 4.096 15 C -0.125 4.125 16 C -0.122 4.122 17 C -0.069 4.069 18 C -0.165 4.165 19 C -0.090 4.090 20 C -0.179 4.179 21 O -0.346 6.346 22 Si 0.595 3.405 23 C -0.125 4.125 24 C 0.006 3.994 25 N -0.183 5.183 26 C -0.172 4.172 27 C -0.172 4.172 28 C -0.094 4.094 29 C -0.231 4.231 30 H 0.120 0.880 31 H 0.075 0.925 32 H 0.075 0.925 33 H 0.146 0.854 34 H 0.094 0.906 35 H 0.118 0.882 36 H 0.231 0.769 37 H 0.177 0.823 38 H 0.150 0.850 39 H 0.147 0.853 40 H 0.131 0.869 41 H 0.227 0.773 42 H -0.181 1.181 43 H -0.182 1.182 44 H 0.145 0.855 45 H 0.255 0.745 46 H 0.121 0.879 47 H 0.096 0.904 48 H 0.144 0.856 49 H 0.144 0.856 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -1.293 -0.439 1.181 1.805 hybrid contribution -1.529 -0.893 -0.012 1.771 sum -2.822 -1.332 1.169 3.332 Atomic orbital electron populations 1.23091 0.78038 1.04230 1.01466 1.86078 1.21666 1.26894 1.88569 1.19036 0.92314 0.84278 0.95941 1.20292 0.91344 0.98157 1.06999 1.19415 0.94588 0.92201 0.97106 1.21615 0.91055 0.99101 0.97511 0.88478 1.23579 0.97897 0.98526 0.98078 1.21909 0.82827 0.97146 0.96692 0.87127 1.45554 1.08901 1.11367 1.70437 1.17175 0.81604 0.86863 0.76852 1.90883 1.84702 1.13429 1.49860 1.20063 0.96041 0.82757 1.10789 1.20983 0.89973 0.99470 1.02072 1.18227 0.94471 0.92635 1.06846 1.20382 0.91995 0.97867 0.96617 1.20489 0.99554 0.92215 1.04234 1.20040 0.93592 0.95418 0.99925 1.25080 1.10648 0.93614 0.88574 1.86501 1.83360 1.48910 1.15857 0.94548 0.77135 0.83601 0.85237 1.19858 0.93920 0.94569 1.04123 1.18306 0.84023 0.95402 1.01665 1.41892 1.09375 1.07002 1.60075 1.23436 0.97546 1.00029 0.96164 1.20923 0.93656 0.98137 1.04519 1.20953 0.94578 0.97085 0.96769 1.21282 1.00198 0.92458 1.09135 0.88019 0.92519 0.92521 0.85377 0.90560 0.88200 0.76944 0.82347 0.84984 0.85339 0.86874 0.77273 1.18121 1.18202 0.85525 0.74507 0.87923 0.90401 0.85639 0.85597 0.85458 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.70 10.50 -19.42 -0.20 -0.90 16 3 C 0.13 0.26 6.69 -39.21 -0.26 0.00 16 4 C -0.15 -0.20 9.65 -39.43 -0.38 -0.58 16 5 C -0.03 0.00 5.29 -104.65 -0.55 -0.55 16 6 C -0.07 0.14 3.86 -90.96 -0.35 -0.21 16 7 H 0.10 -0.27 8.09 -51.93 -0.42 -0.69 16 8 C -0.14 0.21 7.25 -25.92 -0.19 0.02 16 9 C 0.12 -0.15 4.32 -67.12 -0.29 -0.44 16 10 H 0.11 0.02 7.46 -51.93 -0.39 -0.37 16 11 N -0.71 0.97 5.26 -54.21 -0.29 0.68 16 12 C 0.59 1.00 7.80 -12.69 -0.10 0.91 16 13 O -0.51 -2.74 16.44 5.24 0.09 -2.66 16 14 C 0.01 0.01 6.97 -82.29 -0.57 -0.56 16 15 C -0.10 -0.17 10.53 -39.15 -0.41 -0.59 16 16 C -0.12 -0.17 6.16 -106.93 -0.66 -0.83 16 17 C -0.05 -0.01 10.06 -39.54 -0.40 -0.40 16 18 C -0.15 0.07 8.59 -39.97 -0.34 -0.27 16 19 C -0.09 0.01 5.40 -104.57 -0.56 -0.56 16 20 C -0.07 0.04 2.81 36.00 0.10 0.14 16 21 O -0.54 0.12 12.76 -35.23 -0.45 -0.33 16 22 Si 0.69 -0.90 29.75 -169.99 -5.06 -5.95 16 23 C -0.10 -0.03 9.61 -39.42 -0.38 -0.41 16 24 C 0.12 0.10 7.25 -83.98 -0.61 -0.51 16 25 N -0.58 0.47 6.07 -7.36 -0.04 0.43 16 26 C -0.13 0.33 7.29 -25.92 -0.19 0.14 16 27 C -0.15 0.02 8.61 -39.56 -0.34 -0.32 16 28 C -0.08 -0.01 10.04 -39.60 -0.40 -0.41 16 29 C -0.21 -0.19 9.04 -39.43 -0.36 -0.54 16 30 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 31 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 32 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 33 H 0.13 0.05 8.05 -52.49 -0.42 -0.37 16 34 H 0.08 -0.04 8.14 -51.92 -0.42 -0.46 16 35 H 0.10 -0.17 6.31 -51.93 -0.33 -0.50 16 36 H 0.40 -1.56 7.76 -40.82 -0.32 -1.87 16 37 H 0.16 0.17 8.06 -52.48 -0.42 -0.25 16 38 H 0.13 -0.24 8.06 -52.49 -0.42 -0.66 16 39 H 0.13 -0.30 4.82 -52.49 -0.25 -0.55 16 40 H 0.11 -0.02 7.96 -51.93 -0.41 -0.44 16 41 H 0.38 -1.50 8.70 45.56 0.40 -1.10 16 42 H -0.26 -0.52 7.11 56.52 0.40 -0.11 16 43 H -0.26 -0.27 7.10 56.52 0.40 0.13 16 44 H 0.13 -0.07 8.06 -52.48 -0.42 -0.49 16 45 H 0.42 -1.59 8.12 -40.82 -0.33 -1.93 16 46 H 0.10 -0.26 7.72 -51.93 -0.40 -0.66 16 47 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 48 H 0.13 -0.22 6.65 -52.49 -0.35 -0.57 16 49 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 50 H 0.13 -0.10 6.30 -52.49 -0.33 -0.43 16 LS Contribution 411.94 15.07 6.21 6.21 Total: 0.00 -9.39 411.94 -12.51 -21.89 By element: Atomic # 1 Polarization: -7.84 SS G_CDS: -6.51 Total: -14.35 kcal Atomic # 6 Polarization: 1.23 SS G_CDS: -6.25 Total: -5.02 kcal Atomic # 7 Polarization: 1.44 SS G_CDS: -0.33 Total: 1.11 kcal Atomic # 8 Polarization: -3.32 SS G_CDS: -0.57 Total: -3.89 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.06 Total: -5.95 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -9.39 -12.51 -21.89 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10812630_13158378.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.655 kcal (2) G-P(sol) polarization free energy of solvation -9.385 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.270 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.509 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.894 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.761 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds