Wall clock time and date at job start Tue Mar 9 2021 14:21:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.35533 * 125.67621 * 2 1 4 4 C 1.35452 * 108.86876 * 180.02562 * 3 2 1 5 5 C 1.50706 * 126.06407 * 180.02562 * 4 3 2 6 6 O 1.42896 * 109.46866 * 244.97389 * 5 4 3 7 7 Si 1.86293 * 109.47218 * 4.97383 * 5 4 3 8 8 C 1.39834 * 107.86769 * 359.73887 * 4 3 2 9 9 C 1.37649 * 125.67546 * 180.02562 * 2 1 3 10 10 C 1.46674 * 126.23924 * 359.97438 * 9 2 1 11 11 O 1.21696 * 119.99576 * 5.17612 * 10 9 2 12 12 N 1.34773 * 120.00513 * 185.18269 * 10 9 2 13 13 C 1.46495 * 120.00036 * 174.59566 * 12 10 9 14 14 H 1.09000 * 112.85016 * 335.91637 * 13 12 10 15 15 C 1.53781 * 113.61605 * 107.22727 * 13 12 10 16 16 C 1.53775 * 87.08344 * 89.11181 * 15 13 12 17 17 H 1.08995 * 113.61919 * 270.88410 * 16 15 13 18 18 C 1.50703 * 113.69127 * 139.99151 * 16 15 13 19 19 C 1.38120 * 119.97208 * 142.19080 * 18 16 15 20 20 C 1.38758 * 119.94044 * 179.79194 * 19 18 16 21 21 O 1.35902 * 120.05136 * 180.20495 * 20 19 18 22 22 C 1.42898 * 116.99978 * 180.25462 * 21 20 19 23 23 F 1.39904 * 109.47104 * 59.99986 * 22 21 20 24 24 F 1.39895 * 109.47706 * 179.97438 * 22 21 20 25 25 F 1.39899 * 109.47161 * 300.00489 * 22 21 20 26 26 C 1.38712 * 119.89171 * 0.46002 * 20 19 18 27 27 C 1.38162 * 119.94047 * 359.77035 * 26 20 19 28 28 C 1.38245 * 120.05853 * 0.02562 * 27 26 20 29 29 C 1.53781 * 87.08332 * 25.43233 * 16 15 13 30 30 H 1.09006 * 109.46874 * 270.90626 * 1 2 3 31 31 H 1.09005 * 109.47486 * 30.90262 * 1 2 3 32 32 H 1.08995 * 109.47586 * 150.90767 * 1 2 3 33 33 H 1.08004 * 125.56350 * 0.04906 * 3 2 1 34 34 H 1.09000 * 109.47007 * 124.97393 * 5 4 3 35 35 H 0.96704 * 114.00652 * 60.00118 * 6 5 4 36 36 H 1.48506 * 110.00166 * 180.02562 * 7 5 4 37 37 H 1.48507 * 109.99866 * 301.31829 * 7 5 4 38 38 H 1.07996 * 126.45977 * 180.25988 * 8 4 3 39 39 H 0.96999 * 119.99783 * 354.31528 * 12 10 9 40 40 H 1.09005 * 113.61344 * 203.66245 * 15 13 12 41 41 H 1.08995 * 113.61195 * 334.56315 * 15 13 12 42 42 H 1.08000 * 120.03069 * 0.02562 * 19 18 16 43 43 H 1.07998 * 120.02660 * 179.79099 * 26 20 19 44 44 H 1.08005 * 119.97179 * 179.97438 * 27 26 20 45 45 H 1.07997 * 119.94676 * 179.97438 * 28 27 26 46 46 H 1.08999 * 113.61688 * 220.01752 * 29 16 15 47 47 H 1.09002 * 113.61445 * 89.11521 * 29 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5521 0.7093 -0.0006 5 6 4.7536 1.6190 -0.0002 6 8 5.4771 1.4529 -1.2213 7 14 4.1926 3.3888 0.1534 8 6 3.5779 -0.6888 0.0051 9 6 2.2677 -1.1182 -0.0005 10 6 1.8124 -2.5124 -0.0006 11 8 0.6257 -2.7649 -0.0953 12 7 2.7081 -3.5140 0.1043 13 6 2.2472 -4.8994 0.2235 14 1 1.2375 -4.9764 0.6267 15 6 2.4699 -5.7343 -1.0486 16 6 3.8534 -6.0893 -0.4788 17 1 4.6354 -5.3839 -0.7594 18 6 4.2515 -7.5250 -0.7058 19 6 5.5635 -7.8386 -1.0023 20 6 5.9302 -9.1611 -1.2069 21 8 7.2214 -9.4727 -1.4947 22 6 7.5255 -10.8539 -1.6985 23 9 6.7725 -11.3440 -2.7710 24 9 8.8879 -10.9945 -1.9833 25 9 7.2135 -11.5758 -0.5415 26 6 4.9758 -10.1641 -1.1224 27 6 3.6638 -9.8447 -0.8302 28 6 3.3017 -8.5267 -0.6226 29 6 3.2593 -5.8279 0.9153 30 1 -0.3633 0.0163 1.0276 31 1 -0.3634 0.8818 -0.5278 32 1 -0.3634 -0.8979 -0.4996 33 1 1.9081 2.1236 0.0008 34 1 5.3990 1.3680 0.8415 35 1 4.9633 1.6592 -2.0142 36 1 5.3683 4.2960 0.1543 37 1 3.2863 3.7337 -0.9714 38 1 4.4583 -1.3144 0.0101 39 1 3.6581 -3.3178 0.0968 40 1 1.7995 -6.5897 -1.1324 41 1 2.5130 -5.1382 -1.9601 42 1 6.3041 -7.0556 -1.0712 43 1 5.2581 -11.1939 -1.2846 44 1 2.9201 -10.6252 -0.7646 45 1 2.2756 -8.2790 -0.3947 46 1 3.9396 -5.3073 1.5893 47 1 2.8047 -6.7089 1.3685 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10860230_10803934.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:21:49 Heat of formation + Delta-G solvation = -146.393641 kcal Electronic energy + Delta-G solvation = -36183.809340 eV Core-core repulsion = 30692.582734 eV Total energy + Delta-G solvation = -5491.226606 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.133 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -51.55231 -49.27081 -49.14859 -42.56814 -41.68715 -40.85188 -39.56552 -38.15963 -37.77692 -34.87473 -33.73473 -32.29386 -31.40623 -30.56370 -28.32879 -27.26794 -26.68198 -26.31568 -25.62425 -24.12314 -23.81082 -22.90155 -21.33785 -21.02926 -20.48928 -20.27024 -20.11246 -19.63870 -18.86220 -18.06932 -17.72574 -17.16485 -17.04445 -16.78732 -16.65372 -16.40107 -16.36014 -15.95776 -15.90987 -15.78676 -15.69866 -15.61875 -15.55448 -15.35389 -15.27047 -15.24842 -15.07545 -14.89086 -14.46933 -14.44572 -14.20846 -14.01327 -13.90907 -13.47426 -13.46723 -13.23137 -13.13500 -12.91725 -12.81148 -12.69585 -12.42726 -11.82736 -11.77852 -11.70915 -11.30032 -11.16841 -10.43975 -10.18646 -9.92647 -9.69742 -9.58253 -9.26372 -4.84849 0.09661 0.22338 0.37169 0.40263 1.40392 1.55266 1.58901 1.67835 1.72782 2.04899 2.27435 2.30728 2.49378 2.66425 2.88785 3.43219 3.56495 3.57589 3.60774 3.66496 3.73198 3.85076 3.88424 3.93871 4.03581 4.05436 4.19251 4.23924 4.27892 4.37639 4.41245 4.42013 4.63176 4.73287 4.74471 4.78976 4.80451 4.84942 4.88149 4.96548 5.00266 5.04269 5.14142 5.21062 5.26339 5.35565 5.46430 5.61124 5.69686 5.88373 5.89758 6.16735 6.45502 6.62309 7.11154 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.059 3.941 2 N -0.412 5.412 3 C 0.034 3.966 4 C -0.216 4.216 5 C -0.045 4.045 6 O -0.552 6.552 7 Si 0.765 3.235 8 C -0.110 4.110 9 C -0.079 4.079 10 C 0.590 3.410 11 O -0.581 6.581 12 N -0.691 5.691 13 C 0.119 3.881 14 H 0.093 0.907 15 C -0.141 4.141 16 C -0.069 4.069 17 H 0.111 0.889 18 C -0.034 4.034 19 C -0.129 4.129 20 C 0.084 3.916 21 O -0.320 6.320 22 C 0.608 3.392 23 F -0.166 7.166 24 F -0.133 7.133 25 F -0.165 7.165 26 C -0.208 4.208 27 C -0.079 4.079 28 C -0.132 4.132 29 C -0.122 4.122 30 H 0.086 0.914 31 H 0.109 0.891 32 H 0.086 0.914 33 H 0.197 0.803 34 H 0.120 0.880 35 H 0.383 0.617 36 H -0.309 1.309 37 H -0.280 1.280 38 H 0.158 0.842 39 H 0.415 0.585 40 H 0.105 0.895 41 H 0.066 0.934 42 H 0.146 0.854 43 H 0.131 0.869 44 H 0.153 0.847 45 H 0.152 0.848 46 H 0.089 0.911 47 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.051 2.241 3.151 4.925 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.084 5.084 3 C -0.104 4.104 4 C -0.222 4.222 5 C -0.154 4.154 6 O -0.360 6.360 7 Si 0.671 3.329 8 C -0.137 4.137 9 C -0.191 4.191 10 C 0.380 3.620 11 O -0.463 6.463 12 N -0.341 5.341 13 C 0.014 3.986 14 H 0.111 0.889 15 C -0.179 4.179 16 C -0.087 4.087 17 H 0.129 0.871 18 C -0.034 4.034 19 C -0.147 4.147 20 C 0.042 3.958 21 O -0.240 6.240 22 C 0.517 3.483 23 F -0.148 7.148 24 F -0.114 7.114 25 F -0.147 7.147 26 C -0.226 4.226 27 C -0.097 4.097 28 C -0.150 4.150 29 C -0.160 4.160 30 H 0.105 0.895 31 H 0.128 0.872 32 H 0.105 0.895 33 H 0.214 0.786 34 H 0.138 0.862 35 H 0.232 0.768 36 H -0.237 1.237 37 H -0.206 1.206 38 H 0.176 0.824 39 H 0.252 0.748 40 H 0.123 0.877 41 H 0.084 0.916 42 H 0.164 0.836 43 H 0.149 0.851 44 H 0.170 0.830 45 H 0.170 0.830 46 H 0.107 0.893 47 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -3.688 2.689 3.134 5.536 hybrid contribution 0.902 -0.885 -1.459 1.930 sum -2.786 1.803 1.675 3.717 Atomic orbital electron populations 1.22456 0.74889 1.05883 1.04864 1.44022 1.07623 1.04805 1.51926 1.22318 0.89934 0.92487 1.05612 1.19815 0.94038 0.94756 1.13593 1.24478 0.93503 1.08387 0.89059 1.86558 1.42726 1.90258 1.16430 0.94343 0.79014 0.71871 0.87662 1.21427 0.94300 0.95141 1.02806 1.20066 0.90939 0.87579 1.20549 1.17148 0.85297 0.84193 0.75391 1.90776 1.17774 1.85303 1.52406 1.45238 1.10038 1.05235 1.73633 1.21877 0.99426 0.79631 0.97681 0.88916 1.23579 0.96336 1.00298 0.97687 1.21648 0.97665 0.91710 0.97657 0.87070 1.19670 0.91425 0.96097 0.96191 1.20524 0.97570 0.92719 1.03934 1.18962 0.79928 0.95696 1.01187 1.86401 1.29423 1.22331 1.85881 1.19270 0.75512 0.78654 0.74855 1.93305 1.76426 1.88050 1.56997 1.93317 1.29972 1.94791 1.93329 1.93304 1.92672 1.78576 1.50132 1.21684 0.95235 0.98675 1.07015 1.21256 0.94817 0.97749 0.95841 1.21379 1.00875 0.91898 1.00867 1.23404 0.97440 0.99561 0.95599 0.89521 0.87241 0.89525 0.78614 0.86237 0.76766 1.23745 1.20607 0.82431 0.74768 0.87681 0.91568 0.83577 0.85084 0.82955 0.83017 0.89268 0.87272 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.13 10.66 127.77 1.36 1.23 16 2 N -0.41 -0.32 3.16 -534.31 -1.69 -2.01 16 3 C 0.03 -0.08 9.94 83.48 0.83 0.75 16 4 C -0.22 0.23 5.43 -20.12 -0.11 0.12 16 5 C -0.04 0.08 3.02 71.24 0.22 0.30 16 6 O -0.55 -0.97 12.88 -148.98 -1.92 -2.89 16 7 Si 0.77 -2.75 30.60 68.60 2.10 -0.65 16 8 C -0.11 0.01 10.29 22.57 0.23 0.24 16 9 C -0.08 -0.20 6.89 40.35 0.28 0.07 16 10 C 0.59 2.49 7.77 86.45 0.67 3.16 16 11 O -0.58 -6.12 14.28 -4.34 -0.06 -6.18 16 12 N -0.69 1.52 5.25 -444.00 -2.33 -0.81 16 13 C 0.12 -0.41 4.29 45.52 0.20 -0.21 16 14 H 0.09 0.01 7.54 -2.39 -0.02 -0.01 16 15 C -0.14 0.62 7.25 31.12 0.23 0.85 16 16 C -0.07 0.43 3.85 -11.01 -0.04 0.39 16 17 H 0.11 -0.88 8.09 -2.39 -0.02 -0.89 16 18 C -0.03 0.10 5.29 -19.88 -0.11 -0.01 16 19 C -0.13 -0.01 9.65 22.37 0.22 0.20 16 20 C 0.08 0.28 6.48 22.51 0.15 0.42 16 21 O -0.32 -1.53 10.37 -92.44 -0.96 -2.49 16 22 C 0.61 2.11 3.42 113.37 0.39 2.50 16 23 F -0.17 -0.59 15.56 44.97 0.70 0.11 16 24 F -0.13 -0.51 17.53 44.97 0.79 0.27 16 25 F -0.16 -0.55 15.56 44.97 0.70 0.15 16 26 C -0.21 -0.36 8.26 22.37 0.18 -0.17 16 27 C -0.08 0.15 10.04 22.25 0.22 0.38 16 28 C -0.13 0.49 8.61 22.28 0.19 0.68 16 29 C -0.12 0.90 7.29 31.12 0.23 1.12 16 30 H 0.09 -0.33 8.14 -2.38 -0.02 -0.35 16 31 H 0.11 -0.83 8.14 -2.38 -0.02 -0.85 16 32 H 0.09 0.22 6.17 -2.39 -0.01 0.21 16 33 H 0.20 -1.62 6.21 -2.91 -0.02 -1.64 16 34 H 0.12 -0.37 7.96 -2.39 -0.02 -0.39 16 35 H 0.38 -1.30 8.70 -74.05 -0.64 -1.94 16 36 H -0.31 -1.57 7.11 99.48 0.71 -0.86 16 37 H -0.28 0.13 7.11 99.48 0.71 0.83 16 38 H 0.16 -0.61 7.45 -2.91 -0.02 -0.63 16 39 H 0.41 -2.80 7.60 -92.71 -0.70 -3.51 16 40 H 0.10 -0.62 6.32 -2.38 -0.02 -0.63 16 41 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 42 H 0.15 -0.36 8.05 -2.91 -0.02 -0.38 16 43 H 0.13 0.17 5.10 -2.91 -0.01 0.16 16 44 H 0.15 -0.95 8.06 -2.91 -0.02 -0.98 16 45 H 0.15 -1.21 6.66 -2.91 -0.02 -1.23 16 46 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 47 H 0.11 -0.91 7.72 -2.39 -0.02 -0.93 16 Total: 0.00 -19.82 402.04 2.42 -17.40 By element: Atomic # 1 Polarization: -14.68 SS G_CDS: -0.24 Total: -14.91 kcal Atomic # 6 Polarization: 6.69 SS G_CDS: 5.33 Total: 12.02 kcal Atomic # 7 Polarization: 1.20 SS G_CDS: -4.02 Total: -2.82 kcal Atomic # 8 Polarization: -8.62 SS G_CDS: -2.94 Total: -11.56 kcal Atomic # 9 Polarization: -1.66 SS G_CDS: 2.19 Total: 0.53 kcal Atomic # 14 Polarization: -2.75 SS G_CDS: 2.10 Total: -0.65 kcal Total: -19.82 2.42 -17.40 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10860230_10803934.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -128.996 kcal (2) G-P(sol) polarization free energy of solvation -19.819 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.815 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.421 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.397 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.394 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds