Wall clock time and date at job start Tue Mar 9 2021 14:28:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86291 * 109.47280 * 2 1 4 4 C 1.50695 * 109.47227 * 120.00910 * 2 1 3 5 5 C 1.34239 * 126.49718 * 254.97042 * 4 2 1 6 6 N 1.36834 * 109.94208 * 180.02562 * 5 4 2 7 7 C 1.46497 * 125.06486 * 180.02562 * 6 5 4 8 8 C 1.50699 * 109.47038 * 265.02080 * 7 6 5 9 9 O 1.21284 * 120.00206 * 0.02562 * 8 7 6 10 10 N 1.34779 * 120.00024 * 179.97438 * 8 7 6 11 11 C 1.46500 * 120.00193 * 180.02562 * 10 8 7 12 12 H 1.09008 * 112.84950 * 23.80577 * 11 10 8 13 13 C 1.53777 * 113.61676 * 155.00005 * 11 10 8 14 14 C 1.53776 * 87.08274 * 89.11745 * 13 11 10 15 15 H 1.09003 * 113.61283 * 270.80697 * 14 13 11 16 16 C 1.50700 * 113.61943 * 139.98195 * 14 13 11 17 17 C 1.38115 * 119.97180 * 119.97684 * 16 14 13 18 18 C 1.38755 * 119.94139 * 179.71066 * 17 16 14 19 19 O 1.35904 * 120.05953 * 180.32269 * 18 17 16 20 20 C 1.42900 * 117.00133 * 180.24665 * 19 18 17 21 21 F 1.39895 * 109.46936 * 60.00049 * 20 19 18 22 22 F 1.39898 * 109.46709 * 179.97438 * 20 19 18 23 23 F 1.39896 * 109.47101 * 299.99521 * 20 19 18 24 24 C 1.38711 * 119.88992 * 0.56736 * 18 17 16 25 25 C 1.38167 * 119.94263 * 359.47347 * 24 18 17 26 26 C 1.38244 * 120.05373 * 0.23663 * 25 24 18 27 27 C 1.53774 * 113.61479 * 252.49805 * 11 10 8 28 28 C 1.37694 * 109.87091 * 0.26192 * 6 5 4 29 29 C 1.39080 * 133.51037 * 179.73367 * 28 6 5 30 30 C 1.37796 * 119.77500 * 180.02562 * 29 28 6 31 31 C 1.38782 * 120.66943 * 0.02562 * 30 29 28 32 32 C 1.36668 * 120.52492 * 359.58012 * 31 30 29 33 33 C 1.39586 * 119.76357 * 0.65799 * 32 31 30 34 34 H 0.96696 * 114.00417 * 59.99300 * 1 2 3 35 35 H 1.09003 * 109.46384 * 240.00045 * 2 1 3 36 36 H 1.48501 * 110.00237 * 60.00896 * 3 2 1 37 37 H 1.48500 * 109.99960 * 181.32313 * 3 2 1 38 38 H 1.08007 * 125.02992 * 359.97302 * 5 4 2 39 39 H 1.08999 * 109.47197 * 145.02228 * 7 6 5 40 40 H 1.08996 * 109.47332 * 25.02207 * 7 6 5 41 41 H 0.96993 * 120.00113 * 0.02562 * 10 8 7 42 42 H 1.09001 * 113.61217 * 334.56878 * 13 11 10 43 43 H 1.09000 * 113.61776 * 203.66869 * 13 11 10 44 44 H 1.08001 * 120.03381 * 359.97438 * 17 16 14 45 45 H 1.08002 * 120.03310 * 179.75673 * 24 18 17 46 46 H 1.07999 * 119.97386 * 180.24987 * 25 24 18 47 47 H 1.08007 * 119.94618 * 179.97438 * 26 25 24 48 48 H 1.09005 * 113.61117 * 156.33053 * 27 11 10 49 49 H 1.09003 * 113.61668 * 25.43699 * 27 11 10 50 50 H 1.07991 * 120.11732 * 0.02562 * 29 28 6 51 51 H 1.08002 * 119.66419 * 179.97438 * 30 29 28 52 52 H 1.07993 * 119.74063 * 180.02562 * 31 30 29 53 53 H 1.08010 * 120.11932 * 179.91690 * 32 31 30 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7563 0.0000 4 6 1.9314 -0.7106 1.2303 5 6 2.4614 -0.1379 2.3226 6 7 2.8038 -1.0993 3.2341 7 6 3.4086 -0.8408 4.5431 8 6 4.9070 -0.9622 4.4368 9 8 5.4192 -1.2371 3.3724 10 7 5.6779 -0.7643 5.5245 11 6 7.1345 -0.8817 5.4212 12 1 7.5014 -0.7195 4.4076 13 6 7.8948 -0.0760 6.4877 14 6 7.8043 -1.3237 7.3820 15 1 6.9042 -1.3565 7.9960 16 6 9.0602 -1.5945 8.1696 17 6 9.0175 -1.6179 9.5499 18 6 10.1730 -1.8732 10.2744 19 8 10.1324 -1.9032 11.6325 20 6 11.3612 -2.1666 12.3126 21 9 12.2958 -1.1781 11.9863 22 9 11.1400 -2.1608 13.6940 23 9 11.8507 -3.4180 11.9235 24 6 11.3709 -2.0926 9.6103 25 6 11.4085 -2.0673 8.2293 26 6 10.2546 -1.8187 7.5097 27 6 7.6993 -2.1473 6.0876 28 6 2.5000 -2.3464 2.7354 29 6 2.6419 -3.6373 3.2332 30 6 2.2325 -4.7121 2.4743 31 6 1.6795 -4.5205 1.2159 32 6 1.5235 -3.2603 0.7107 33 6 1.9360 -2.1573 1.4603 34 1 -0.3934 0.4418 -0.7649 35 1 1.7922 -0.5139 -0.8900 36 1 1.5617 2.4678 1.2086 37 1 3.5346 1.7701 -0.0322 38 1 2.5981 0.9245 2.4612 39 1 3.0356 -1.5668 5.2654 40 1 3.1480 0.1653 4.8714 41 1 5.2683 -0.5441 6.3757 42 1 7.3355 0.7775 6.8711 43 1 8.9137 0.1802 6.1975 44 1 8.0846 -1.4418 10.0649 45 1 12.2725 -2.2876 10.1720 46 1 12.3401 -2.2421 7.7117 47 1 10.2861 -1.7989 6.4303 48 1 8.6648 -2.4574 5.6878 49 1 6.9823 -2.9661 6.1478 50 1 3.0713 -3.7968 4.2111 51 1 2.3439 -5.7138 2.8624 52 1 1.3634 -5.3737 0.6341 53 1 1.0936 -3.1188 -0.2700 There are 81 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 81 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10860230_9818708.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:28:27 Heat of formation + Delta-G solvation = -125.160151 kcal Electronic energy + Delta-G solvation = -42730.339838 eV Core-core repulsion = 36699.817945 eV Total energy + Delta-G solvation = -6030.521893 eV No. of doubly occupied orbitals = 81 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 447.149 amu Computer time = 1.90 seconds Orbital eigenvalues (eV) -51.57424 -49.29106 -49.17299 -42.64917 -41.79436 -41.05402 -39.86905 -38.29788 -38.04979 -37.56986 -34.78445 -34.16591 -32.31512 -31.58336 -31.16915 -30.36429 -29.07580 -27.29589 -26.74813 -26.37786 -25.53482 -23.99721 -23.85701 -23.18229 -22.76894 -21.86011 -21.06864 -20.61813 -20.29203 -20.16051 -19.73488 -18.74469 -18.28455 -18.22150 -17.92262 -17.78620 -17.19095 -16.99955 -16.53195 -16.46027 -16.39330 -16.37213 -15.94770 -15.89831 -15.80106 -15.64755 -15.57752 -15.52158 -15.30900 -15.28736 -15.14962 -14.96401 -14.87862 -14.80738 -14.59943 -14.45787 -14.27091 -14.18905 -13.98587 -13.63255 -13.58130 -13.38151 -12.96204 -12.87011 -12.76065 -12.74897 -12.64352 -12.47906 -12.06708 -11.88399 -11.81619 -11.77058 -11.36900 -11.26204 -10.63948 -10.23114 -10.18347 -9.96554 -9.62292 -9.25557 -8.73299 -4.97915 0.04988 0.05496 0.18487 0.34464 0.57437 1.29842 1.32272 1.32890 1.50292 1.69031 1.70607 1.97101 2.07979 2.45100 2.64113 2.86345 2.89212 3.37397 3.45374 3.46965 3.52863 3.57030 3.59590 3.63013 3.67842 3.80016 3.84028 3.88582 3.97446 4.00679 4.02111 4.14450 4.18677 4.22556 4.23160 4.35792 4.37206 4.52095 4.57364 4.61615 4.71475 4.72260 4.77338 4.82938 4.84131 4.91193 4.95610 4.97764 5.07521 5.07563 5.21589 5.31319 5.40160 5.44681 5.56879 5.58884 5.65622 5.66540 5.84299 6.04818 6.15770 6.37002 6.99453 7.03673 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.047 4.047 3 Si 0.785 3.215 4 C -0.180 4.180 5 C 0.053 3.947 6 N -0.467 5.467 7 C 0.086 3.914 8 C 0.495 3.505 9 O -0.570 6.570 10 N -0.693 5.693 11 C 0.114 3.886 12 H 0.081 0.919 13 C -0.123 4.123 14 C -0.064 4.064 15 H 0.119 0.881 16 C -0.035 4.035 17 C -0.126 4.126 18 C 0.085 3.915 19 O -0.319 6.319 20 C 0.608 3.392 21 F -0.165 7.165 22 F -0.132 7.132 23 F -0.166 7.166 24 C -0.207 4.207 25 C -0.080 4.080 26 C -0.135 4.135 27 C -0.141 4.141 28 C 0.091 3.909 29 C -0.135 4.135 30 C -0.102 4.102 31 C -0.151 4.151 32 C -0.082 4.082 33 C -0.120 4.120 34 H 0.399 0.601 35 H 0.074 0.926 36 H -0.280 1.280 37 H -0.300 1.300 38 H 0.175 0.825 39 H 0.149 0.851 40 H 0.156 0.844 41 H 0.421 0.579 42 H 0.092 0.908 43 H 0.102 0.898 44 H 0.150 0.850 45 H 0.131 0.869 46 H 0.151 0.849 47 H 0.148 0.852 48 H 0.098 0.902 49 H 0.070 0.930 50 H 0.134 0.866 51 H 0.150 0.850 52 H 0.143 0.857 53 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.376 3.145 0.536 3.474 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.156 4.156 3 Si 0.689 3.311 4 C -0.188 4.188 5 C -0.072 4.072 6 N -0.150 5.150 7 C -0.039 4.039 8 C 0.280 3.720 9 O -0.448 6.448 10 N -0.346 5.346 11 C 0.009 3.991 12 H 0.099 0.901 13 C -0.161 4.161 14 C -0.082 4.082 15 H 0.137 0.863 16 C -0.035 4.035 17 C -0.145 4.145 18 C 0.043 3.957 19 O -0.239 6.239 20 C 0.517 3.483 21 F -0.147 7.147 22 F -0.114 7.114 23 F -0.148 7.148 24 C -0.226 4.226 25 C -0.098 4.098 26 C -0.152 4.152 27 C -0.179 4.179 28 C -0.014 4.014 29 C -0.156 4.156 30 C -0.121 4.121 31 C -0.170 4.170 32 C -0.101 4.101 33 C -0.124 4.124 34 H 0.249 0.751 35 H 0.092 0.908 36 H -0.207 1.207 37 H -0.228 1.228 38 H 0.192 0.808 39 H 0.166 0.834 40 H 0.173 0.827 41 H 0.259 0.741 42 H 0.111 0.889 43 H 0.120 0.880 44 H 0.168 0.832 45 H 0.149 0.851 46 H 0.168 0.832 47 H 0.165 0.835 48 H 0.116 0.884 49 H 0.089 0.911 50 H 0.152 0.848 51 H 0.167 0.833 52 H 0.161 0.839 53 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -0.441 3.339 1.202 3.576 hybrid contribution 0.693 -0.661 0.952 1.351 sum 0.252 2.678 2.154 3.446 Atomic orbital electron populations 1.86481 1.17668 1.82401 1.50920 1.24230 0.85324 1.10594 0.95459 0.94248 0.76780 0.74544 0.85501 1.20048 1.09544 0.91965 0.97222 1.21717 1.01603 0.94397 0.89502 1.43385 1.52296 1.03886 1.15419 1.21996 0.89050 1.08806 0.84038 1.21356 0.90347 0.76246 0.84014 1.90801 1.75608 1.48395 1.30031 1.45477 1.06150 1.70772 1.12186 1.21841 0.79802 0.97583 0.99917 0.90105 1.23382 1.01806 0.96786 0.94077 1.21648 0.95285 0.96970 0.94314 0.86256 1.19676 0.95738 0.96468 0.91638 1.20525 0.96656 1.03967 0.93311 1.18966 0.96547 1.01945 0.78256 1.86399 1.30185 1.86848 1.20516 1.19269 0.77189 0.74803 0.77025 1.93304 1.66468 1.62582 1.92379 1.93320 1.94547 1.96277 1.27224 1.93305 1.87931 1.42734 1.90801 1.21686 0.96477 1.06952 0.97471 1.21240 0.99959 0.96282 0.92290 1.21363 0.91770 1.00625 1.01479 1.23557 1.02340 0.96919 0.95093 1.18474 1.01601 0.86882 0.94488 1.20258 1.04917 0.88789 1.01614 1.21193 0.97656 0.98987 0.94289 1.20977 1.02005 0.97053 0.96950 1.20497 0.98614 0.91322 0.99620 1.19351 1.04411 0.93450 0.95155 0.75065 0.90794 1.20697 1.22809 0.80803 0.83382 0.82682 0.74055 0.88942 0.87967 0.83186 0.85098 0.83164 0.83451 0.88358 0.91108 0.84813 0.83260 0.83879 0.85448 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -2.12 12.86 -148.98 -1.92 -4.03 16 2 C -0.05 -0.20 3.05 71.23 0.22 0.01 16 3 Si 0.78 0.07 30.79 68.60 2.11 2.18 16 4 C -0.18 -1.91 5.61 -18.63 -0.10 -2.02 16 5 C 0.05 0.43 9.89 83.00 0.82 1.25 16 6 N -0.47 -2.89 2.27 -520.00 -1.18 -4.07 16 7 C 0.09 -0.33 6.48 85.63 0.56 0.22 16 8 C 0.49 0.34 7.90 87.66 0.69 1.03 16 9 O -0.57 -7.18 16.02 -3.04 -0.05 -7.23 16 10 N -0.69 4.56 5.26 -440.04 -2.32 2.25 16 11 C 0.11 -0.52 4.32 45.51 0.20 -0.33 16 12 H 0.08 0.11 7.46 -2.38 -0.02 0.09 16 13 C -0.12 1.05 7.29 31.12 0.23 1.28 16 14 C -0.06 0.53 3.86 -11.02 -0.04 0.49 16 15 H 0.12 -1.37 8.09 -2.39 -0.02 -1.39 16 16 C -0.04 0.15 5.29 -19.88 -0.11 0.04 16 17 C -0.13 0.19 9.65 22.36 0.22 0.41 16 18 C 0.08 0.19 6.48 22.51 0.15 0.33 16 19 O -0.32 -1.16 10.37 -92.47 -0.96 -2.12 16 20 C 0.61 1.61 3.42 113.37 0.39 2.00 16 21 F -0.17 -0.45 15.56 44.97 0.70 0.25 16 22 F -0.13 -0.40 17.53 44.97 0.79 0.39 16 23 F -0.17 -0.48 15.56 44.97 0.70 0.22 16 24 C -0.21 -0.25 8.26 22.37 0.18 -0.06 16 25 C -0.08 0.17 10.04 22.25 0.22 0.39 16 26 C -0.13 0.52 8.61 22.28 0.19 0.72 16 27 C -0.14 0.80 7.25 31.12 0.23 1.02 16 28 C 0.09 0.92 6.80 39.03 0.27 1.18 16 29 C -0.14 -0.89 10.00 22.37 0.22 -0.66 16 30 C -0.10 -0.52 10.01 22.30 0.22 -0.30 16 31 C -0.15 -0.96 9.97 22.03 0.22 -0.74 16 32 C -0.08 -0.80 10.05 22.23 0.22 -0.58 16 33 C -0.12 -1.50 6.35 -20.20 -0.13 -1.63 16 34 H 0.40 -2.97 8.74 -74.06 -0.65 -3.61 16 35 H 0.07 0.19 7.96 -2.39 -0.02 0.17 16 36 H -0.28 -1.17 7.04 99.48 0.70 -0.47 16 37 H -0.30 -2.21 7.11 99.48 0.71 -1.51 16 38 H 0.18 0.68 6.30 -2.91 -0.02 0.66 16 39 H 0.15 -1.44 8.14 -2.39 -0.02 -1.46 16 40 H 0.16 -1.70 8.12 -2.39 -0.02 -1.72 16 41 H 0.42 -5.88 8.70 -92.71 -0.81 -6.69 16 42 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 43 H 0.10 -0.84 7.72 -2.39 -0.02 -0.86 16 44 H 0.15 -0.73 8.05 -2.91 -0.02 -0.75 16 45 H 0.13 0.12 5.10 -2.91 -0.01 0.10 16 46 H 0.15 -0.90 8.06 -2.91 -0.02 -0.92 16 47 H 0.15 -1.09 6.65 -2.91 -0.02 -1.11 16 48 H 0.10 -0.55 6.31 -2.38 -0.02 -0.57 16 49 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 50 H 0.13 0.19 8.06 -2.92 -0.02 0.17 16 51 H 0.15 -0.09 8.06 -2.91 -0.02 -0.11 16 52 H 0.14 0.19 8.06 -2.91 -0.02 0.16 16 53 H 0.13 0.91 8.06 -2.91 -0.02 0.88 16 Total: 0.00 -30.84 454.88 2.53 -28.31 By element: Atomic # 1 Polarization: -19.80 SS G_CDS: -0.41 Total: -20.21 kcal Atomic # 6 Polarization: -0.99 SS G_CDS: 5.06 Total: 4.07 kcal Atomic # 7 Polarization: 1.67 SS G_CDS: -3.50 Total: -1.83 kcal Atomic # 8 Polarization: -10.46 SS G_CDS: -2.92 Total: -13.38 kcal Atomic # 9 Polarization: -1.33 SS G_CDS: 2.19 Total: 0.86 kcal Atomic # 14 Polarization: 0.07 SS G_CDS: 2.11 Total: 2.18 kcal Total: -30.84 2.53 -28.31 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10860230_9818708.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.851 kcal (2) G-P(sol) polarization free energy of solvation -30.843 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.693 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.533 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.309 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.160 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.90 seconds