Wall clock time and date at job start Tue Mar 9 2021 12:51:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 C 1.53003 * 109.47126 * 2 1 4 4 O 1.42905 * 109.47287 * 119.99639 * 2 1 3 5 5 C 1.42896 * 113.99793 * 89.99930 * 4 2 1 6 6 H 1.09001 * 112.84834 * 18.81205 * 5 4 2 7 7 C 1.53786 * 113.61228 * 150.00253 * 5 4 2 8 8 C 1.53782 * 87.07933 * 140.06615 * 7 5 4 9 9 H 1.09001 * 113.61244 * 89.19752 * 8 7 5 10 10 N 1.46501 * 113.61260 * 220.01697 * 8 7 5 11 11 C 1.34773 * 120.00023 * 203.46920 * 10 8 7 12 12 O 1.21286 * 119.99764 * 0.02562 * 11 10 8 13 13 C 1.50699 * 120.00279 * 179.97438 * 11 10 8 14 14 N 1.46499 * 109.47361 * 180.02562 * 13 11 10 15 15 C 1.36833 * 125.06343 * 265.02803 * 14 13 11 16 16 C 1.34234 * 109.93968 * 180.02562 * 15 14 13 17 17 C 1.50701 * 126.50041 * 180.02562 * 16 15 14 18 18 O 1.42900 * 109.47223 * 254.97775 * 17 16 15 19 19 Si 1.86305 * 109.47226 * 14.97540 * 17 16 15 20 20 C 1.46487 * 106.99693 * 0.02562 * 16 15 14 21 21 C 1.39593 * 134.03364 * 180.02562 * 20 16 15 22 22 C 1.36656 * 119.76666 * 179.97438 * 21 20 16 23 23 C 1.38798 * 120.52612 * 0.02562 * 22 21 20 24 24 C 1.37785 * 120.66545 * 359.97438 * 23 22 21 25 25 C 1.37685 * 125.06304 * 85.04975 * 14 13 11 26 26 C 1.53781 * 87.17336 * 334.61052 * 8 7 5 27 27 H 1.09001 * 109.47378 * 179.97438 * 1 2 3 28 28 H 1.09000 * 109.47431 * 300.00379 * 1 2 3 29 29 H 1.09005 * 109.47387 * 60.00146 * 1 2 3 30 30 H 1.08995 * 109.47543 * 240.00090 * 2 1 3 31 31 H 1.08996 * 109.47475 * 179.97438 * 3 2 1 32 32 H 1.09003 * 109.47072 * 299.99668 * 3 2 1 33 33 H 1.09000 * 109.47274 * 59.99525 * 3 2 1 34 34 H 1.08999 * 113.61427 * 25.51831 * 7 5 4 35 35 H 1.08999 * 113.60952 * 254.61661 * 7 5 4 36 36 H 0.96998 * 119.99938 * 23.47039 * 10 8 7 37 37 H 1.09003 * 109.46933 * 60.00490 * 13 11 10 38 38 H 1.09000 * 109.47246 * 300.00435 * 13 11 10 39 39 H 1.08005 * 125.02815 * 0.28487 * 15 14 13 40 40 H 1.09001 * 109.47210 * 134.97481 * 17 16 15 41 41 H 0.96700 * 114.00275 * 179.97438 * 18 17 16 42 42 H 1.48500 * 109.99672 * 300.00139 * 19 17 16 43 43 H 1.48503 * 109.99625 * 61.31828 * 19 17 16 44 44 H 1.07999 * 120.11612 * 359.94294 * 21 20 16 45 45 H 1.08000 * 119.74252 * 179.97438 * 22 21 20 46 46 H 1.07995 * 119.66320 * 179.97438 * 23 22 21 47 47 H 1.07996 * 120.11040 * 180.02562 * 24 23 22 48 48 H 1.09001 * 113.61272 * 139.93758 * 26 8 7 49 49 H 1.09001 * 113.61315 * 270.83965 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 8 2.0063 -0.6736 1.1668 5 6 2.2000 -2.0781 0.9887 6 1 2.2732 -2.3656 -0.0601 7 6 3.3194 -2.6618 1.8670 8 6 2.4070 -3.8808 2.0824 9 1 2.5378 -4.6618 1.3334 10 7 2.4317 -4.3973 3.4532 11 6 2.0932 -5.6789 3.6966 12 8 1.7686 -6.4048 2.7807 13 6 2.1191 -6.2105 5.1065 14 7 1.7138 -7.6183 5.1052 15 6 0.4432 -8.0706 5.3360 16 6 0.4141 -9.4107 5.2631 17 6 -0.7926 -10.2929 5.4550 18 8 -0.7192 -10.9290 6.7325 19 14 -2.3392 -9.2580 5.3646 20 6 1.7777 -9.8529 4.9615 21 6 2.3725 -11.1007 4.7675 22 6 3.7087 -11.1800 4.4924 23 6 4.4799 -10.0293 4.4048 24 6 3.9133 -8.7876 4.5928 25 6 2.5547 -8.6833 4.8721 26 6 1.2193 -2.9466 1.7974 27 1 -0.3634 -1.0277 -0.0005 28 1 -0.3634 0.5139 0.8899 29 1 -0.3634 0.5138 -0.8900 30 1 1.8933 -0.5138 -0.8899 31 1 3.1299 1.4426 0.0005 32 1 1.6766 1.9563 -0.8900 33 1 1.6765 1.9564 0.8899 34 1 3.5048 -2.0892 2.7757 35 1 4.2317 -2.8910 1.3163 36 1 2.6917 -3.8169 4.1855 37 1 1.4306 -5.6343 5.7246 38 1 3.1284 -6.1237 5.5090 39 1 -0.4108 -7.4422 5.5418 40 1 -0.8165 -11.0511 4.6724 41 1 -1.4655 -11.5132 6.9245 42 1 -2.3187 -8.2203 6.4266 43 1 -2.4435 -8.6164 4.0294 44 1 1.7788 -12.0004 4.8350 45 1 4.1685 -12.1457 4.3428 46 1 5.5348 -10.1082 4.1871 47 1 4.5217 -7.8981 4.5222 48 1 0.4386 -3.4055 1.1906 49 1 0.8295 -2.4520 2.6871 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10905398_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:55 Heat of formation + Delta-G solvation = -16.040517 kcal Electronic energy + Delta-G solvation = -29873.707478 eV Core-core repulsion = 25769.183856 eV Total energy + Delta-G solvation = -4104.523622 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.177 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.48911 -41.26927 -39.97486 -38.08716 -37.85579 -37.44270 -34.70597 -34.06363 -32.98344 -31.34087 -30.17667 -29.05643 -28.26199 -26.87840 -26.07179 -24.90382 -23.60232 -22.63919 -22.38818 -21.67875 -21.14139 -20.42060 -18.58042 -18.48911 -18.19133 -17.93846 -17.63206 -16.83826 -16.55481 -16.41287 -16.33176 -15.83007 -15.49924 -15.42438 -15.33064 -14.88148 -14.75273 -14.63586 -14.44007 -14.02506 -13.99889 -13.86520 -13.64496 -13.51319 -13.44802 -13.39194 -13.19277 -12.73377 -12.62979 -12.46623 -12.36165 -12.31869 -12.10649 -12.00172 -11.89080 -11.70899 -11.64397 -11.09195 -10.54257 -10.42470 -10.21116 -10.10176 -9.02545 -8.53576 -4.95348 0.27367 0.79609 1.35345 1.37869 1.42362 1.60826 1.76629 2.04977 2.07392 2.66412 3.10967 3.26283 3.37518 3.46018 3.49773 3.66154 3.69569 3.73711 3.76355 3.81544 3.84490 3.87251 4.04194 4.10615 4.14961 4.22458 4.32285 4.36910 4.47309 4.52567 4.56902 4.60206 4.66956 4.70750 4.75874 4.78419 4.80630 4.82027 4.87058 4.90466 4.94845 4.99118 5.17830 5.19817 5.25346 5.31988 5.64457 5.80057 5.85591 5.89198 6.13588 6.24265 6.30156 6.36821 6.81094 6.97964 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.080 3.920 3 C -0.152 4.152 4 O -0.365 6.365 5 C 0.068 3.932 6 H 0.092 0.908 7 C -0.143 4.143 8 C 0.124 3.876 9 H 0.118 0.882 10 N -0.715 5.715 11 C 0.492 3.508 12 O -0.514 6.514 13 C 0.091 3.909 14 N -0.465 5.465 15 C 0.064 3.936 16 C -0.150 4.150 17 C -0.032 4.032 18 O -0.547 6.547 19 Si 0.681 3.319 20 C -0.085 4.085 21 C -0.063 4.063 22 C -0.145 4.145 23 C -0.096 4.096 24 C -0.127 4.127 25 C 0.109 3.891 26 C -0.168 4.168 27 H 0.056 0.944 28 H 0.064 0.936 29 H 0.066 0.934 30 H 0.061 0.939 31 H 0.062 0.938 32 H 0.070 0.930 33 H 0.064 0.936 34 H 0.098 0.902 35 H 0.082 0.918 36 H 0.404 0.596 37 H 0.122 0.878 38 H 0.121 0.879 39 H 0.162 0.838 40 H 0.070 0.930 41 H 0.378 0.622 42 H -0.254 1.254 43 H -0.256 1.256 44 H 0.123 0.877 45 H 0.124 0.876 46 H 0.126 0.874 47 H 0.115 0.885 48 H 0.074 0.926 49 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.802 2.691 0.282 2.823 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C 0.022 3.978 3 C -0.209 4.209 4 O -0.284 6.284 5 C 0.009 3.991 6 H 0.110 0.890 7 C -0.181 4.181 8 C 0.019 3.981 9 H 0.135 0.865 10 N -0.368 5.368 11 C 0.276 3.724 12 O -0.388 6.388 13 C -0.035 4.035 14 N -0.149 5.149 15 C -0.060 4.060 16 C -0.158 4.158 17 C -0.143 4.143 18 O -0.352 6.352 19 Si 0.582 3.418 20 C -0.090 4.090 21 C -0.082 4.082 22 C -0.164 4.164 23 C -0.115 4.115 24 C -0.148 4.148 25 C 0.005 3.995 26 C -0.207 4.207 27 H 0.075 0.925 28 H 0.083 0.917 29 H 0.085 0.915 30 H 0.079 0.921 31 H 0.081 0.919 32 H 0.089 0.911 33 H 0.083 0.917 34 H 0.116 0.884 35 H 0.101 0.899 36 H 0.239 0.761 37 H 0.140 0.860 38 H 0.138 0.862 39 H 0.179 0.821 40 H 0.088 0.912 41 H 0.225 0.775 42 H -0.179 1.179 43 H -0.180 1.180 44 H 0.141 0.859 45 H 0.142 0.858 46 H 0.144 0.856 47 H 0.133 0.867 48 H 0.093 0.907 49 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -0.717 3.733 -0.297 3.812 hybrid contribution 0.557 0.359 -0.071 0.666 sum -0.160 4.091 -0.368 4.111 Atomic orbital electron populations 1.22331 0.95788 1.02441 1.02771 1.22222 0.93847 0.93980 0.87744 1.21886 1.01853 0.94390 1.02765 1.87972 1.85661 1.19048 1.35712 1.23474 0.95867 0.81227 0.98527 0.89042 1.23621 0.97827 0.95215 1.01424 1.22242 0.96798 0.94713 0.84339 0.86452 1.45868 1.69580 1.11672 1.09682 1.21049 0.77513 0.82249 0.91577 1.90807 1.45535 1.56919 1.45533 1.21610 1.04989 0.81485 0.95454 1.43168 1.06993 1.03786 1.60905 1.21412 0.86709 0.94605 1.03308 1.19533 0.93093 0.91828 1.11309 1.23938 1.02461 0.99936 0.88008 1.86540 1.49945 1.64759 1.34001 0.95376 0.83005 0.82812 0.80590 1.18925 0.92175 0.92686 1.05169 1.20280 0.94635 0.95644 0.97612 1.20672 0.93866 0.98531 1.03370 1.20831 0.99734 0.91478 0.99461 1.19955 0.90971 0.98304 1.05551 1.18169 0.92309 0.86112 1.02913 1.24058 0.97895 0.97074 1.01649 0.92466 0.91740 0.91538 0.92066 0.91923 0.91077 0.91716 0.88405 0.89911 0.76115 0.86035 0.86160 0.82107 0.91172 0.77519 1.17885 1.18035 0.85873 0.85794 0.85620 0.86659 0.90686 0.88749 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.10 9.53 37.15 0.35 0.45 16 2 C 0.08 -0.02 3.33 -26.73 -0.09 -0.11 16 3 C -0.15 0.12 9.56 37.16 0.36 0.48 16 4 O -0.37 -0.35 10.00 -35.23 -0.35 -0.70 16 5 C 0.07 -0.05 4.26 -25.83 -0.11 -0.16 16 6 H 0.09 -0.14 7.45 -51.93 -0.39 -0.53 16 7 C -0.14 0.25 7.66 -25.92 -0.20 0.05 16 8 C 0.12 -0.08 4.21 -67.12 -0.28 -0.36 16 9 H 0.12 0.13 7.50 -51.93 -0.39 -0.26 16 10 N -0.72 1.05 5.36 -53.02 -0.28 0.76 16 11 C 0.49 0.68 7.90 -10.99 -0.09 0.59 16 12 O -0.51 -3.28 16.04 5.55 0.09 -3.19 16 13 C 0.09 -0.06 6.48 -5.19 -0.03 -0.10 16 14 N -0.47 -1.61 2.27 -115.71 -0.26 -1.87 16 15 C 0.06 0.26 9.89 -16.73 -0.17 0.10 16 16 C -0.15 -0.74 5.61 -102.71 -0.58 -1.32 16 17 C -0.03 -0.06 3.05 36.01 0.11 0.05 16 18 O -0.55 -1.02 12.86 -35.23 -0.45 -1.47 16 19 Si 0.68 0.13 30.79 -169.99 -5.23 -5.11 16 20 C -0.09 -0.49 6.35 -105.14 -0.67 -1.16 16 21 C -0.06 -0.28 10.05 -39.65 -0.40 -0.68 16 22 C -0.15 -0.46 9.97 -39.95 -0.40 -0.85 16 23 C -0.10 -0.27 10.01 -39.54 -0.40 -0.67 16 24 C -0.13 -0.45 10.00 -39.43 -0.39 -0.85 16 25 C 0.11 0.55 6.80 -83.99 -0.57 -0.02 16 26 C -0.17 0.07 7.73 -25.83 -0.20 -0.13 16 27 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 28 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 29 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 30 H 0.06 -0.07 7.42 -51.93 -0.39 -0.45 16 31 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 33 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.10 -0.20 8.11 -51.93 -0.42 -0.63 16 35 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 36 H 0.40 -1.79 8.71 -40.82 -0.36 -2.15 16 37 H 0.12 -0.44 8.12 -51.93 -0.42 -0.86 16 38 H 0.12 -0.38 8.14 -51.93 -0.42 -0.80 16 39 H 0.16 0.35 6.30 -52.48 -0.33 0.02 16 40 H 0.07 0.06 7.96 -51.93 -0.41 -0.35 16 41 H 0.38 -1.30 8.74 45.56 0.40 -0.90 16 42 H -0.25 -0.61 7.04 56.52 0.40 -0.21 16 43 H -0.26 -0.85 7.11 56.52 0.40 -0.45 16 44 H 0.12 0.35 8.06 -52.49 -0.42 -0.07 16 45 H 0.12 0.11 8.06 -52.49 -0.42 -0.31 16 46 H 0.13 0.06 8.06 -52.49 -0.42 -0.37 16 47 H 0.12 0.17 8.06 -52.49 -0.42 -0.25 16 48 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 49 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 LS Contribution 407.85 15.07 6.15 6.15 Total: 0.00 -11.04 407.85 -11.93 -22.97 By element: Atomic # 1 Polarization: -5.03 SS G_CDS: -7.83 Total: -12.85 kcal Atomic # 6 Polarization: -0.93 SS G_CDS: -3.75 Total: -4.68 kcal Atomic # 7 Polarization: -0.56 SS G_CDS: -0.55 Total: -1.11 kcal Atomic # 8 Polarization: -4.65 SS G_CDS: -0.72 Total: -5.36 kcal Atomic # 14 Polarization: 0.13 SS G_CDS: -5.23 Total: -5.11 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -11.04 -11.93 -22.97 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905398_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.929 kcal (2) G-P(sol) polarization free energy of solvation -11.043 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.114 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.926 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.969 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.041 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds