Wall clock time and date at job start Tue Mar 9 2021 12:54:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42895 * 109.47510 * 2 1 4 4 C 1.42896 * 114.00409 * 179.97438 * 3 2 1 5 5 H 1.09008 * 112.84659 * 341.19300 * 4 3 2 6 6 C 1.53775 * 113.69245 * 112.46457 * 4 3 2 7 7 C 1.53779 * 87.08438 * 139.99471 * 6 4 3 8 8 H 1.09002 * 113.61731 * 89.11293 * 7 6 4 9 9 N 1.46500 * 113.68825 * 220.00754 * 7 6 4 10 10 C 1.34778 * 119.99919 * 254.05902 * 9 7 6 11 11 O 1.21692 * 120.00006 * 0.02562 * 10 9 7 12 12 C 1.46654 * 119.99774 * 180.02562 * 10 9 7 13 13 C 1.36552 * 125.98555 * 180.02562 * 12 10 9 14 14 C 1.50698 * 126.64330 * 359.92511 * 13 12 10 15 15 C 1.40367 * 106.70667 * 179.97438 * 13 12 10 16 16 C 1.35136 * 107.11510 * 0.02562 * 15 13 12 17 17 C 1.50697 * 125.61359 * 180.02562 * 16 15 13 18 18 O 1.42905 * 109.46969 * 89.99842 * 17 16 15 19 19 C 1.35899 * 116.99625 * 179.97438 * 18 17 16 20 20 C 1.38728 * 120.06001 * 359.72782 * 19 18 17 21 21 C 1.38149 * 119.94664 * 179.74329 * 20 19 18 22 22 C 1.38261 * 120.05257 * 0.50475 * 21 20 19 23 23 C 1.50698 * 119.94180 * 179.74308 * 22 21 20 24 24 O 1.42905 * 109.47244 * 245.02170 * 23 22 21 25 25 Si 1.86295 * 109.47268 * 5.02662 * 23 22 21 26 26 C 1.38271 * 120.11265 * 359.77144 * 22 21 20 27 27 C 1.38141 * 120.05372 * 359.97249 * 26 22 21 28 28 O 1.33932 * 108.76565 * 359.76817 * 16 15 13 29 29 C 1.53777 * 113.61697 * 210.00061 * 4 3 2 30 30 H 1.09008 * 109.46908 * 60.00369 * 1 2 3 31 31 H 1.09002 * 109.47308 * 179.97438 * 1 2 3 32 32 H 1.08993 * 109.47265 * 300.00362 * 1 2 3 33 33 H 1.08997 * 109.47670 * 239.99349 * 2 1 3 34 34 H 1.09008 * 109.46908 * 119.99631 * 2 1 3 35 35 H 1.08993 * 113.61636 * 25.43835 * 6 4 3 36 36 H 1.09008 * 113.61006 * 254.54078 * 6 4 3 37 37 H 0.96998 * 119.99853 * 74.06469 * 9 7 6 38 38 H 1.09005 * 109.46907 * 90.00354 * 14 13 12 39 39 H 1.09001 * 109.46825 * 209.99733 * 14 13 12 40 40 H 1.08998 * 109.47363 * 330.00324 * 14 13 12 41 41 H 1.07997 * 126.44039 * 179.97438 * 15 13 12 42 42 H 1.08995 * 109.46977 * 209.99608 * 17 16 15 43 43 H 1.09004 * 109.47412 * 329.99958 * 17 16 15 44 44 H 1.08004 * 120.02491 * 359.97438 * 20 19 18 45 45 H 1.07995 * 119.97100 * 180.23126 * 21 20 19 46 46 H 1.09008 * 109.46799 * 125.02824 * 23 22 21 47 47 H 0.96700 * 113.99586 * 60.00446 * 24 23 22 48 48 H 1.48503 * 109.99986 * 58.67993 * 25 23 22 49 49 H 1.48504 * 110.00171 * 179.97438 * 25 23 22 50 50 H 1.08000 * 119.97155 * 179.97438 * 26 22 21 51 51 H 1.08000 * 120.02564 * 179.97438 * 27 26 22 52 52 H 1.08997 * 113.61941 * 105.38035 * 29 4 3 53 53 H 1.09009 * 113.68972 * 334.49114 * 29 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3472 0.0000 4 6 3.4309 1.4600 0.0006 5 1 3.9277 0.5455 0.3248 6 6 4.0049 2.0450 -1.3006 7 6 4.9915 2.8299 -0.4200 8 1 5.9150 2.2900 -0.2108 9 7 5.2257 4.2018 -0.8773 10 6 6.3880 4.5222 -1.4797 11 8 7.2428 3.6718 -1.6440 12 6 6.6226 5.8957 -1.9370 13 6 7.7491 6.3529 -2.5589 14 6 8.9768 5.5489 -2.9010 15 6 7.5422 7.7171 -2.8167 16 6 6.3143 8.0290 -2.3463 17 6 5.6706 9.3902 -2.4081 18 8 4.9304 9.5123 -3.6244 19 6 4.2836 10.6883 -3.8375 20 6 4.3550 11.7018 -2.8928 21 6 3.7009 12.8983 -3.1143 22 6 2.9669 13.0823 -4.2714 23 6 2.2496 14.3864 -4.5078 24 8 0.8389 14.1583 -4.5224 25 14 2.6711 15.5831 -3.1437 26 6 2.8894 12.0716 -5.2119 27 6 3.5460 10.8753 -4.9975 28 8 5.7616 6.9279 -1.8213 29 6 3.9484 2.7252 0.7051 30 1 -0.3633 0.5138 -0.8901 31 1 -0.3634 -1.0277 -0.0005 32 1 -0.3633 0.5139 0.8899 33 1 1.8934 -0.5139 -0.8899 34 1 1.8933 -0.5138 0.8901 35 1 3.3025 2.6791 -1.8414 36 1 4.4845 1.3027 -1.9387 37 1 4.5442 4.8796 -0.7466 38 1 8.8643 5.1197 -3.8967 39 1 9.8528 6.1974 -2.8819 40 1 9.1015 4.7481 -2.1722 41 1 8.2345 8.3910 -3.2994 42 1 4.9977 9.5127 -1.5594 43 1 6.4425 10.1591 -2.3738 44 1 4.9246 11.5568 -1.9868 45 1 3.7593 13.6889 -2.3809 46 1 2.5601 14.8034 -5.4659 47 1 0.4921 13.7869 -3.6997 48 1 4.1389 15.8041 -3.0975 49 1 1.9704 16.8735 -3.3655 50 1 2.3151 12.2177 -6.1148 51 1 3.4849 10.0861 -5.7322 52 1 4.3822 2.5322 1.6862 53 1 3.2313 3.5462 0.7135 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10905468_4549632.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:49 Heat of formation + Delta-G solvation = -75.396372 kcal Electronic energy + Delta-G solvation = -34476.535612 eV Core-core repulsion = 29669.273513 eV Total energy + Delta-G solvation = -4807.262098 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.181 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -43.95750 -41.34084 -41.20285 -39.85902 -39.21520 -37.59982 -37.17664 -35.42192 -34.39734 -33.15722 -32.06554 -31.77795 -31.48647 -28.93404 -28.39459 -26.82672 -26.23564 -25.34649 -24.05218 -23.70040 -22.80818 -22.47382 -22.22891 -21.35129 -20.63043 -19.47298 -19.19755 -18.39784 -18.32315 -17.55329 -17.39437 -17.00413 -16.80644 -16.69129 -16.53543 -16.50906 -16.09319 -15.81057 -15.72431 -15.47180 -15.25707 -14.93302 -14.63538 -14.46806 -14.34778 -14.23015 -14.12462 -14.00557 -13.82272 -13.71451 -13.54531 -13.50381 -13.46484 -13.42497 -12.87246 -12.79268 -12.50542 -12.25857 -12.18294 -12.06340 -12.04294 -11.96600 -11.80225 -11.74785 -11.30469 -10.82639 -10.45678 -10.39988 -10.31408 -10.03825 -9.73244 -9.23846 -4.98978 -0.29017 0.27768 0.31132 0.94572 1.33207 1.34299 1.65112 1.90578 1.92481 1.99216 2.35867 2.65947 2.79420 3.27731 3.38088 3.48484 3.57339 3.61971 3.65229 3.72183 3.75537 3.81912 3.83980 3.95161 4.02488 4.08098 4.17344 4.22297 4.27686 4.31484 4.37037 4.42778 4.46228 4.48649 4.50080 4.58202 4.63457 4.68124 4.68465 4.70649 4.79496 4.89463 4.92980 4.94289 4.95456 4.97923 5.02216 5.07103 5.15967 5.24365 5.25983 5.28214 5.38464 5.50627 5.66363 5.69638 6.25875 6.28733 6.30658 6.79966 6.86229 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.049 3.951 3 O -0.392 6.392 4 C 0.065 3.935 5 H 0.107 0.893 6 C -0.168 4.168 7 C 0.122 3.878 8 H 0.117 0.883 9 N -0.697 5.697 10 C 0.604 3.396 11 O -0.544 6.544 12 C -0.095 4.095 13 C -0.095 4.095 14 C -0.095 4.095 15 C -0.188 4.188 16 C 0.011 3.989 17 C 0.135 3.865 18 O -0.327 6.327 19 C 0.125 3.875 20 C -0.201 4.201 21 C -0.075 4.075 22 C -0.161 4.161 23 C -0.072 4.072 24 O -0.558 6.558 25 Si 0.777 3.223 26 C -0.062 4.062 27 C -0.163 4.163 28 O -0.160 6.160 29 C -0.133 4.133 30 H 0.055 0.945 31 H 0.085 0.915 32 H 0.059 0.941 33 H 0.053 0.947 34 H 0.060 0.940 35 H 0.086 0.914 36 H 0.074 0.926 37 H 0.415 0.585 38 H 0.076 0.924 39 H 0.089 0.911 40 H 0.072 0.928 41 H 0.183 0.817 42 H 0.106 0.894 43 H 0.130 0.870 44 H 0.162 0.838 45 H 0.153 0.847 46 H 0.103 0.897 47 H 0.395 0.605 48 H -0.283 1.283 49 H -0.304 1.304 50 H 0.132 0.868 51 H 0.130 0.870 52 H 0.096 0.904 53 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.694 0.711 5.302 5.395 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.027 4.027 3 O -0.312 6.312 4 C 0.007 3.993 5 H 0.125 0.875 6 C -0.207 4.207 7 C 0.017 3.983 8 H 0.134 0.866 9 N -0.347 5.347 10 C 0.391 3.609 11 O -0.424 6.424 12 C -0.147 4.147 13 C -0.098 4.098 14 C -0.151 4.151 15 C -0.207 4.207 16 C -0.041 4.041 17 C 0.062 3.938 18 O -0.242 6.242 19 C 0.080 3.920 20 C -0.219 4.219 21 C -0.092 4.092 22 C -0.162 4.162 23 C -0.182 4.182 24 O -0.367 6.367 25 Si 0.684 3.316 26 C -0.080 4.080 27 C -0.182 4.182 28 O -0.057 6.057 29 C -0.171 4.171 30 H 0.074 0.926 31 H 0.104 0.896 32 H 0.078 0.922 33 H 0.071 0.929 34 H 0.079 0.921 35 H 0.105 0.895 36 H 0.093 0.907 37 H 0.252 0.748 38 H 0.095 0.905 39 H 0.108 0.892 40 H 0.091 0.909 41 H 0.200 0.800 42 H 0.124 0.876 43 H 0.148 0.852 44 H 0.179 0.821 45 H 0.170 0.830 46 H 0.120 0.880 47 H 0.245 0.755 48 H -0.210 1.210 49 H -0.232 1.232 50 H 0.150 0.850 51 H 0.148 0.852 52 H 0.115 0.885 53 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -0.106 1.029 4.839 4.949 hybrid contribution 0.039 -0.150 -0.934 0.946 sum -0.066 0.879 3.906 4.004 Atomic orbital electron populations 1.21777 0.93405 1.03220 1.02595 1.22686 0.96029 0.83090 1.00881 1.87926 1.20873 1.27751 1.94628 1.23483 0.81205 0.98650 0.95958 0.87479 1.23996 0.98350 1.00204 0.98160 1.22322 0.98330 0.81810 0.95790 0.86561 1.45785 1.17417 1.12651 1.58875 1.16630 0.82601 0.84097 0.77534 1.90847 1.45397 1.48193 1.57961 1.21855 0.92496 0.88527 1.11846 1.20985 0.96352 0.95009 0.97410 1.20458 0.92956 0.99226 1.02492 1.21894 0.98334 0.95543 1.04903 1.22441 0.93506 0.87993 1.00137 1.21271 0.96908 0.88605 0.87065 1.86111 1.63096 1.34178 1.40841 1.19091 0.93057 0.84932 0.94931 1.21500 1.05537 0.93802 1.01065 1.21047 0.95002 0.97147 0.96046 1.20346 1.02115 0.97368 0.96362 1.25148 0.83540 0.99623 1.09856 1.86470 1.19691 1.86792 1.43699 0.93819 0.77647 0.75859 0.84295 1.20923 0.96476 0.91590 0.99027 1.20620 1.00858 0.99301 0.97429 1.83962 1.41453 1.16624 1.63628 1.23565 0.96720 0.98342 0.98447 0.92584 0.89576 0.92191 0.92851 0.92132 0.89511 0.90725 0.74811 0.90545 0.89214 0.90894 0.79967 0.87588 0.85245 0.82081 0.83006 0.87967 0.75527 1.21002 1.23229 0.84983 0.85188 0.88548 0.88294 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.21 10.28 71.98 0.74 0.95 16 2 C 0.05 -0.03 6.50 71.98 0.47 0.44 16 3 O -0.39 -1.19 10.36 -148.98 -1.54 -2.73 16 4 C 0.07 -0.05 4.31 31.12 0.13 0.08 16 5 H 0.11 -0.42 7.87 -2.38 -0.02 -0.44 16 6 C -0.17 -0.13 7.71 31.12 0.24 0.11 16 7 C 0.12 0.04 4.22 45.52 0.19 0.23 16 8 H 0.12 0.20 7.50 -2.39 -0.02 0.19 16 9 N -0.70 -1.34 5.36 -444.02 -2.38 -3.72 16 10 C 0.60 4.44 7.79 86.44 0.67 5.11 16 11 O -0.54 -6.81 14.36 -4.32 -0.06 -6.87 16 12 C -0.10 -0.60 7.13 24.07 0.17 -0.43 16 13 C -0.09 -0.48 6.20 -19.74 -0.12 -0.60 16 14 C -0.09 -0.32 9.81 71.24 0.70 0.38 16 15 C -0.19 -0.18 10.73 22.07 0.24 0.06 16 16 C 0.01 0.01 6.94 24.97 0.17 0.18 16 17 C 0.14 -0.64 5.27 71.23 0.38 -0.27 16 18 O -0.33 -0.45 10.12 -92.41 -0.94 -1.39 16 19 C 0.12 0.07 6.69 22.51 0.15 0.22 16 20 C -0.20 0.80 9.04 22.37 0.20 1.00 16 21 C -0.08 0.29 8.66 22.25 0.19 0.49 16 22 C -0.16 0.14 5.35 -19.85 -0.11 0.04 16 23 C -0.07 0.08 2.80 71.24 0.20 0.28 16 24 O -0.56 -0.02 12.83 -148.98 -1.91 -1.93 16 25 Si 0.78 -2.64 29.80 68.60 2.04 -0.60 16 26 C -0.06 -0.08 9.68 22.25 0.22 0.14 16 27 C -0.16 -0.34 9.99 22.36 0.22 -0.12 16 28 O -0.16 -0.63 10.40 -5.02 -0.05 -0.68 16 29 C -0.13 0.35 7.66 31.12 0.24 0.59 16 30 H 0.06 0.01 8.14 -2.38 -0.02 -0.01 16 31 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 32 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 33 H 0.05 -0.08 8.14 -2.39 -0.02 -0.10 16 34 H 0.06 -0.17 8.14 -2.38 -0.02 -0.19 16 35 H 0.09 0.22 8.14 -2.39 -0.02 0.20 16 36 H 0.07 0.10 8.14 -2.38 -0.02 0.08 16 37 H 0.41 -0.57 8.47 -92.71 -0.79 -1.36 16 38 H 0.08 0.25 8.14 -2.38 -0.02 0.23 16 39 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 40 H 0.07 0.50 6.45 -2.39 -0.02 0.48 16 41 H 0.18 -0.78 8.06 -2.91 -0.02 -0.80 16 42 H 0.11 -0.91 7.65 -2.39 -0.02 -0.92 16 43 H 0.13 -1.35 7.68 -2.38 -0.02 -1.37 16 44 H 0.16 -1.65 6.30 -2.91 -0.02 -1.67 16 45 H 0.15 -1.36 4.90 -2.91 -0.01 -1.37 16 46 H 0.10 0.05 7.96 -2.38 -0.02 0.03 16 47 H 0.39 -3.21 8.70 -74.06 -0.64 -3.85 16 48 H -0.28 -0.24 7.11 99.48 0.71 0.47 16 49 H -0.30 -1.47 7.11 99.48 0.71 -0.77 16 50 H 0.13 0.07 8.06 -2.91 -0.02 0.05 16 51 H 0.13 0.23 8.06 -2.91 -0.02 0.21 16 52 H 0.10 -0.46 8.14 -2.39 -0.02 -0.48 16 53 H 0.10 -0.25 8.11 -2.38 -0.02 -0.27 16 Total: 0.00 -21.30 441.35 0.02 -21.28 By element: Atomic # 1 Polarization: -11.80 SS G_CDS: -0.44 Total: -12.24 kcal Atomic # 6 Polarization: 3.58 SS G_CDS: 5.30 Total: 8.87 kcal Atomic # 7 Polarization: -1.34 SS G_CDS: -2.38 Total: -3.72 kcal Atomic # 8 Polarization: -9.10 SS G_CDS: -4.50 Total: -13.60 kcal Atomic # 14 Polarization: -2.64 SS G_CDS: 2.04 Total: -0.60 kcal Total: -21.30 0.02 -21.28 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905468_4549632.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.112 kcal (2) G-P(sol) polarization free energy of solvation -21.301 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.413 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.016 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.284 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.396 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds