Wall clock time and date at job start Tue Mar 9 2021 12:55:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.42899 * 109.47392 * 2 1 4 4 C 1.42897 * 114.00083 * 180.02562 * 3 2 1 5 5 H 1.08999 * 112.90793 * 341.25336 * 4 3 2 6 6 C 1.53781 * 113.61595 * 112.50279 * 4 3 2 7 7 C 1.54049 * 87.08031 * 139.97562 * 6 4 3 8 8 H 1.09000 * 113.61076 * 89.06984 * 7 6 4 9 9 N 1.46494 * 113.69866 * 220.05561 * 7 6 4 10 10 C 1.34779 * 119.99525 * 252.42298 * 9 7 6 11 11 O 1.21281 * 120.00328 * 359.97438 * 10 9 7 12 12 C 1.50706 * 119.99749 * 179.97438 * 10 9 7 13 13 O 1.42898 * 109.47423 * 179.97438 * 12 10 9 14 14 C 1.35991 * 117.00433 * 180.02562 * 13 12 10 15 15 C 1.39153 * 120.07299 * 179.97438 * 14 13 12 16 16 O 1.35992 * 120.07522 * 359.97438 * 15 14 13 17 17 C 1.42894 * 116.99903 * 179.97438 * 16 15 14 18 18 C 1.38567 * 119.85108 * 179.97438 * 15 14 13 19 19 C 1.38242 * 119.99884 * 0.02562 * 18 15 14 20 20 C 1.50702 * 119.92604 * 179.97438 * 19 18 15 21 21 O 1.42898 * 109.47522 * 64.99504 * 20 19 18 22 22 Si 1.86298 * 109.47254 * 184.99813 * 20 19 18 23 23 C 1.38250 * 120.14838 * 0.02562 * 19 18 15 24 24 C 1.38247 * 120.14613 * 359.67859 * 23 19 18 25 25 C 1.53781 * 113.61404 * 210.00015 * 4 3 2 26 26 H 1.08992 * 109.47372 * 59.99697 * 1 2 3 27 27 H 1.08998 * 109.47323 * 180.02562 * 1 2 3 28 28 H 1.09005 * 109.46777 * 299.99880 * 1 2 3 29 29 H 1.09005 * 109.46777 * 240.00120 * 2 1 3 30 30 H 1.08998 * 109.47630 * 120.00665 * 2 1 3 31 31 H 1.09005 * 113.61471 * 254.53145 * 6 4 3 32 32 H 1.09003 * 113.61469 * 25.42923 * 6 4 3 33 33 H 0.97000 * 120.00537 * 72.42383 * 9 7 6 34 34 H 1.09001 * 109.46833 * 300.00001 * 12 10 9 35 35 H 1.09005 * 109.47003 * 59.99764 * 12 10 9 36 36 H 1.09002 * 109.47138 * 179.97438 * 17 16 15 37 37 H 1.08995 * 109.47729 * 300.00299 * 17 16 15 38 38 H 1.09008 * 109.47003 * 60.00312 * 17 16 15 39 39 H 1.07994 * 119.99992 * 179.97438 * 18 15 14 40 40 H 1.09004 * 109.46924 * 304.99747 * 20 19 18 41 41 H 0.96693 * 114.00429 * 180.02562 * 21 20 19 42 42 H 1.48502 * 110.00114 * 178.67728 * 22 20 19 43 43 H 1.48496 * 109.99901 * 299.99756 * 22 20 19 44 44 H 1.08004 * 119.92455 * 179.97438 * 23 19 18 45 45 H 1.07994 * 119.99915 * 180.30415 * 24 23 19 46 46 H 1.09002 * 113.61445 * 334.56823 * 25 4 3 47 47 H 1.09002 * 113.61408 * 105.38554 * 25 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 3.4308 1.4600 -0.0006 5 1 3.9290 0.5457 0.3217 6 6 4.0019 2.0464 -1.3025 7 6 4.9913 2.8328 -0.4216 8 1 5.9152 2.2930 -0.2141 9 7 5.2228 4.2056 -0.8775 10 6 6.3964 4.5358 -1.4523 11 8 7.2608 3.6965 -1.5917 12 6 6.6344 5.9479 -1.9218 13 8 7.9415 6.0468 -2.4908 14 6 8.3176 7.2642 -2.9660 15 6 9.5772 7.4327 -3.5329 16 8 10.4350 6.3804 -3.6126 17 6 11.7107 6.6270 -4.2073 18 6 9.9555 8.6751 -4.0161 19 6 9.0825 9.7438 -3.9339 20 6 9.4958 11.0943 -4.4595 21 8 9.6764 11.0199 -5.8750 22 14 8.1719 12.3450 -4.0674 23 6 7.8314 9.5766 -3.3697 24 6 7.4455 8.3383 -2.8913 25 6 3.9489 2.7250 0.7039 26 1 -0.3634 0.5138 -0.8899 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 1.8932 -0.5138 -0.8900 30 1 1.8934 -0.5139 0.8899 31 1 4.4806 1.3050 -1.9422 32 1 3.2979 2.6806 -1.8414 33 1 4.5317 4.8769 -0.7657 34 1 5.8898 6.2113 -2.6731 35 1 6.5542 6.6305 -1.0758 36 1 12.2953 5.7071 -4.2077 37 1 11.5734 6.9711 -5.2323 38 1 12.2368 7.3911 -3.6349 39 1 10.9326 8.8086 -4.4562 40 1 10.4316 11.3963 -3.9892 41 1 9.9440 11.8552 -6.2819 42 1 8.5817 13.6875 -4.5522 43 1 6.8908 11.9448 -4.7029 44 1 7.1524 10.4141 -3.3070 45 1 6.4658 8.2092 -2.4555 46 1 3.2305 3.5447 0.7136 47 1 4.3836 2.5316 1.6846 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10905468_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:25 Heat of formation + Delta-G solvation = -123.159372 kcal Electronic energy + Delta-G solvation = -28593.667675 eV Core-core repulsion = 24324.550458 eV Total energy + Delta-G solvation = -4269.117217 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.83456 -41.22747 -40.10094 -39.21688 -38.80007 -37.51003 -37.10986 -34.46245 -32.17741 -31.78203 -31.45682 -29.60951 -28.46065 -26.77929 -26.22962 -25.14385 -23.73613 -23.43894 -22.43690 -21.70173 -20.97720 -19.75099 -18.62695 -18.46969 -18.26238 -18.09665 -17.52258 -17.46815 -16.76081 -16.66546 -16.50247 -16.28171 -16.09745 -15.85808 -15.68622 -15.43176 -15.21616 -14.64649 -14.36923 -14.09115 -14.03906 -13.98922 -13.56721 -13.50280 -13.47039 -13.43764 -12.82876 -12.76542 -12.59308 -12.47600 -12.23135 -12.18076 -12.13775 -11.96290 -11.92231 -11.78292 -11.68765 -10.99008 -10.49357 -10.43092 -10.15089 -9.78584 -8.92031 -4.89459 0.16145 0.26842 1.31849 1.41807 1.46504 1.63678 1.97295 2.30350 2.49115 2.52281 2.84881 3.37924 3.41125 3.50894 3.56293 3.70985 3.78309 3.85538 3.89223 3.90701 4.04752 4.11717 4.17166 4.17824 4.24330 4.26453 4.30818 4.33533 4.39506 4.47920 4.48952 4.62589 4.65781 4.68599 4.72191 4.82471 4.93085 4.95980 4.99082 5.01622 5.04077 5.10443 5.26607 5.38404 5.43266 5.57851 5.96106 6.28504 6.40306 6.53075 6.59353 7.11457 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.049 3.951 3 O -0.390 6.390 4 C 0.062 3.938 5 H 0.100 0.900 6 C -0.167 4.167 7 C 0.123 3.877 8 H 0.102 0.898 9 N -0.697 5.697 10 C 0.514 3.486 11 O -0.572 6.572 12 C 0.034 3.966 13 O -0.313 6.313 14 C 0.085 3.915 15 C 0.078 3.922 16 O -0.334 6.334 17 C 0.020 3.980 18 C -0.152 4.152 19 C -0.081 4.081 20 C -0.088 4.088 21 O -0.560 6.560 22 Si 0.773 3.227 23 C -0.113 4.113 24 C -0.159 4.159 25 C -0.129 4.129 26 H 0.057 0.943 27 H 0.084 0.916 28 H 0.060 0.940 29 H 0.052 0.948 30 H 0.058 0.942 31 H 0.066 0.934 32 H 0.095 0.905 33 H 0.422 0.578 34 H 0.124 0.876 35 H 0.132 0.868 36 H 0.112 0.888 37 H 0.060 0.940 38 H 0.068 0.932 39 H 0.143 0.857 40 H 0.093 0.907 41 H 0.395 0.605 42 H -0.289 1.289 43 H -0.292 1.292 44 H 0.155 0.845 45 H 0.177 0.823 46 H 0.107 0.893 47 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.726 4.458 4.047 7.080 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.027 4.027 3 O -0.309 6.309 4 C 0.003 3.997 5 H 0.118 0.882 6 C -0.206 4.206 7 C 0.017 3.983 8 H 0.120 0.880 9 N -0.351 5.351 10 C 0.300 3.700 11 O -0.450 6.450 12 C -0.044 4.044 13 O -0.227 6.227 14 C 0.039 3.961 15 C 0.032 3.968 16 O -0.248 6.248 17 C -0.074 4.074 18 C -0.171 4.171 19 C -0.081 4.081 20 C -0.196 4.196 21 O -0.370 6.370 22 Si 0.678 3.322 23 C -0.131 4.131 24 C -0.178 4.178 25 C -0.167 4.167 26 H 0.076 0.924 27 H 0.103 0.897 28 H 0.079 0.921 29 H 0.070 0.930 30 H 0.076 0.924 31 H 0.084 0.916 32 H 0.113 0.887 33 H 0.261 0.739 34 H 0.142 0.858 35 H 0.149 0.851 36 H 0.130 0.870 37 H 0.078 0.922 38 H 0.087 0.913 39 H 0.161 0.839 40 H 0.111 0.889 41 H 0.245 0.755 42 H -0.216 1.216 43 H -0.219 1.219 44 H 0.172 0.828 45 H 0.194 0.806 46 H 0.126 0.874 47 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -3.867 3.592 3.807 6.508 hybrid contribution 0.800 0.162 -1.466 1.678 sum -3.067 3.754 2.341 5.383 Atomic orbital electron populations 1.21769 0.93272 1.03191 1.02692 1.22675 0.96106 0.83199 1.00732 1.87916 1.20778 1.27559 1.94651 1.23483 0.81176 0.98683 0.96314 0.88214 1.24052 0.98412 1.00205 0.97980 1.22195 0.97689 0.82629 0.95755 0.87988 1.45587 1.16400 1.12334 1.60743 1.20599 0.82128 0.89985 0.77244 1.90765 1.45470 1.52611 1.56204 1.22790 0.84888 0.94887 1.01840 1.86216 1.33450 1.28539 1.74460 1.18564 0.92479 0.85705 0.99341 1.18633 0.89587 0.88008 1.00558 1.86187 1.27072 1.33825 1.77726 1.23294 0.81792 1.04599 0.97760 1.21027 1.02170 0.90702 1.03192 1.19254 0.94526 0.94480 0.99879 1.25084 1.10051 1.00986 0.83475 1.86551 1.91332 1.39202 1.19932 0.94045 0.74615 0.73129 0.90434 1.20994 0.95281 0.97729 0.99088 1.21353 1.00798 0.91146 1.04462 1.23550 0.96714 0.98289 0.98148 0.92416 0.89712 0.92114 0.93014 0.92353 0.91563 0.88651 0.73937 0.85801 0.85056 0.86988 0.92151 0.91347 0.83887 0.88875 0.75492 1.21598 1.21934 0.82806 0.80606 0.87432 0.89060 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.28 71.98 0.74 1.02 16 2 C 0.05 -0.04 6.50 71.98 0.47 0.43 16 3 O -0.39 -0.86 10.35 -148.98 -1.54 -2.40 16 4 C 0.06 -0.07 4.31 31.12 0.13 0.06 16 5 H 0.10 -0.30 7.87 -2.39 -0.02 -0.31 16 6 C -0.17 0.01 7.72 31.21 0.24 0.25 16 7 C 0.12 -0.06 4.25 45.61 0.19 0.13 16 8 H 0.10 0.38 7.47 -2.39 -0.02 0.36 16 9 N -0.70 1.78 5.36 -439.60 -2.36 -0.57 16 10 C 0.51 2.45 7.91 87.66 0.69 3.14 16 11 O -0.57 -9.66 16.10 16.00 0.26 -9.40 16 12 C 0.03 -0.04 5.22 71.24 0.37 0.34 16 13 O -0.31 -3.11 9.45 -67.04 -0.63 -3.75 16 14 C 0.08 0.63 6.70 22.57 0.15 0.78 16 15 C 0.08 0.76 6.70 22.57 0.15 0.91 16 16 O -0.33 -4.10 10.28 -79.60 -0.82 -4.91 16 17 C 0.02 0.06 9.81 113.37 1.11 1.18 16 18 C -0.15 -0.89 8.67 22.35 0.19 -0.69 16 19 C -0.08 -0.24 5.38 -19.86 -0.11 -0.35 16 20 C -0.09 0.07 2.79 71.24 0.20 0.27 16 21 O -0.56 -1.24 12.81 -148.98 -1.91 -3.15 16 22 Si 0.77 -2.72 29.84 68.60 2.05 -0.67 16 23 C -0.11 0.01 8.66 22.27 0.19 0.20 16 24 C -0.16 0.03 9.04 22.35 0.20 0.23 16 25 C -0.13 0.51 7.65 31.12 0.24 0.75 16 26 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 27 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 28 H 0.06 -0.07 8.14 -2.38 -0.02 -0.09 16 29 H 0.05 -0.07 8.14 -2.38 -0.02 -0.09 16 30 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 31 H 0.07 0.13 8.14 -2.38 -0.02 0.11 16 32 H 0.10 -0.01 8.14 -2.39 -0.02 -0.03 16 33 H 0.42 -4.28 8.73 -92.71 -0.81 -5.09 16 34 H 0.12 -0.92 7.65 -2.39 -0.02 -0.94 16 35 H 0.13 -1.14 7.67 -2.38 -0.02 -1.16 16 36 H 0.11 0.03 8.14 -2.39 -0.02 0.01 16 37 H 0.06 0.10 7.66 -2.39 -0.02 0.08 16 38 H 0.07 0.00 7.66 -2.38 -0.02 -0.02 16 39 H 0.14 0.49 6.30 -2.91 -0.02 0.47 16 40 H 0.09 -0.43 7.96 -2.38 -0.02 -0.45 16 41 H 0.39 -2.35 8.74 -74.06 -0.65 -3.00 16 42 H -0.29 -0.27 7.11 99.48 0.71 0.44 16 43 H -0.29 -0.81 7.05 99.48 0.70 -0.11 16 44 H 0.15 -0.79 4.85 -2.91 -0.01 -0.81 16 45 H 0.18 -1.53 6.30 -2.91 -0.02 -1.55 16 46 H 0.11 -0.61 8.12 -2.39 -0.02 -0.63 16 47 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 Total: 0.00 -29.94 390.23 -0.20 -30.14 By element: Atomic # 1 Polarization: -13.51 SS G_CDS: -0.42 Total: -13.93 kcal Atomic # 6 Polarization: 3.48 SS G_CDS: 5.18 Total: 8.65 kcal Atomic # 7 Polarization: 1.78 SS G_CDS: -2.36 Total: -0.57 kcal Atomic # 8 Polarization: -18.97 SS G_CDS: -4.65 Total: -23.62 kcal Atomic # 14 Polarization: -2.72 SS G_CDS: 2.05 Total: -0.67 kcal Total: -29.94 -0.20 -30.14 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10905468_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.021 kcal (2) G-P(sol) polarization free energy of solvation -29.937 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.958 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.201 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.138 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.159 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds