Wall clock time and date at job start Tue Mar 9 2021 12:51:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52993 * 109.47163 * 2 1 4 4 C 1.53003 * 109.47050 * 239.99572 * 2 1 3 5 5 O 1.42902 * 109.46731 * 120.00152 * 2 1 3 6 6 C 1.42898 * 114.00420 * 59.99807 * 5 2 1 7 7 H 1.09001 * 112.84834 * 341.19364 * 6 5 2 8 8 C 1.53955 * 113.66662 * 112.43945 * 6 5 2 9 9 C 1.53783 * 87.01951 * 139.93279 * 8 6 5 10 10 H 1.09000 * 113.61036 * 89.22904 * 9 8 6 11 11 N 1.46497 * 113.61304 * 220.04653 * 9 8 6 12 12 C 1.34783 * 119.99981 * 254.13502 * 11 9 8 13 13 O 1.21275 * 119.99729 * 0.02562 * 12 11 9 14 14 C 1.50697 * 119.99736 * 179.97438 * 12 11 9 15 15 N 1.46500 * 109.47049 * 180.02562 * 14 12 11 16 16 C 1.36841 * 125.06259 * 264.98143 * 15 14 12 17 17 C 1.34230 * 109.93490 * 180.02562 * 16 15 14 18 18 C 1.50707 * 126.49609 * 179.97438 * 17 16 15 19 19 O 1.42903 * 109.46442 * 255.02065 * 18 17 16 20 20 Si 1.86293 * 109.47256 * 15.01631 * 18 17 16 21 21 C 1.46489 * 107.00352 * 0.23828 * 17 16 15 22 22 C 1.39596 * 134.03782 * 179.76762 * 21 17 16 23 23 C 1.36654 * 119.76322 * 179.97438 * 22 21 17 24 24 C 1.38794 * 120.53173 * 359.97438 * 23 22 21 25 25 C 1.37795 * 120.66229 * 359.63942 * 24 23 22 26 26 C 1.37688 * 125.06312 * 85.01552 * 15 14 12 27 27 C 1.53779 * 113.61651 * 210.00087 * 6 5 2 28 28 H 1.09003 * 109.47249 * 300.00162 * 1 2 3 29 29 H 1.09000 * 109.47185 * 60.00249 * 1 2 3 30 30 H 1.09000 * 109.47264 * 179.97438 * 1 2 3 31 31 H 1.09007 * 109.47146 * 179.97438 * 3 2 1 32 32 H 1.09003 * 109.47165 * 299.99540 * 3 2 1 33 33 H 1.08995 * 109.47419 * 60.00382 * 3 2 1 34 34 H 1.09000 * 109.47471 * 300.00344 * 4 2 1 35 35 H 1.09000 * 109.46980 * 60.00054 * 4 2 1 36 36 H 1.08999 * 109.46857 * 180.02562 * 4 2 1 37 37 H 1.09001 * 113.61440 * 25.41438 * 8 6 5 38 38 H 1.09001 * 113.66674 * 254.46270 * 8 6 5 39 39 H 0.97001 * 120.00190 * 74.14059 * 11 9 8 40 40 H 1.09002 * 109.47012 * 60.00370 * 14 12 11 41 41 H 1.08998 * 109.47486 * 300.00361 * 14 12 11 42 42 H 1.07998 * 125.02797 * 0.05200 * 16 15 14 43 43 H 1.08999 * 109.47345 * 135.02135 * 18 17 16 44 44 H 0.96700 * 114.00311 * 60.00230 * 19 18 17 45 45 H 1.48506 * 109.99973 * 180.02562 * 20 18 17 46 46 H 1.48493 * 110.00375 * 301.32185 * 20 18 17 47 47 H 1.08000 * 120.11463 * 359.97119 * 22 21 17 48 48 H 1.08003 * 119.73491 * 179.97438 * 23 22 21 49 49 H 1.07991 * 119.66881 * 179.97438 * 24 23 22 50 50 H 1.07997 * 120.10972 * 179.88545 * 25 24 23 51 51 H 1.09001 * 113.61633 * 105.46763 * 27 6 5 52 52 H 1.08999 * 113.61176 * 334.56534 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7214 -1.2492 5 8 2.0062 -0.6737 1.1668 6 6 1.5845 -2.0355 1.2646 7 1 0.7234 -2.2582 0.6345 8 6 2.7334 -3.0501 1.1199 9 6 2.0560 -3.8557 2.2411 10 1 1.3243 -4.5778 1.8789 11 7 2.9999 -4.4345 3.2004 12 6 3.2581 -5.7572 3.1774 13 8 2.7095 -6.4680 2.3622 14 6 4.2295 -6.3524 4.1638 15 7 4.3364 -7.7953 3.9339 16 6 3.6218 -8.7527 4.6012 17 6 3.9582 -9.9717 4.1509 18 6 3.4001 -11.2884 4.6265 19 8 4.3662 -11.9458 5.4490 20 14 1.8485 -10.9856 5.6121 21 6 4.9751 -9.7799 3.1141 22 6 5.7016 -10.6462 2.2953 23 6 6.6028 -10.1392 1.4020 24 6 6.8017 -8.7692 1.3015 25 6 6.0896 -7.8958 2.0944 26 6 5.1712 -8.3901 3.0146 27 6 1.4330 -2.5311 2.7124 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0277 -0.0005 31 1 3.1300 1.4424 0.0005 32 1 1.6767 1.9563 -0.8900 33 1 1.6767 1.9563 0.8900 34 1 1.6766 -1.7490 -1.2492 35 1 1.6766 -0.2076 -2.1392 36 1 3.1300 -0.7217 -1.2490 37 1 3.7079 -2.6489 1.3982 38 1 2.7449 -3.5640 0.1587 39 1 3.4389 -3.8659 3.8522 40 1 3.8742 -6.1711 5.1782 41 1 5.2083 -5.8907 4.0338 42 1 2.8947 -8.5565 5.3752 43 1 3.1675 -11.9164 3.7665 44 1 4.6209 -11.4433 6.2350 45 1 1.2887 -12.2764 6.0874 46 1 2.1460 -10.1046 6.7698 47 1 5.5519 -11.7133 2.3677 48 1 7.1650 -10.8099 0.7690 49 1 7.5177 -8.3837 0.5910 50 1 6.2528 -6.8315 2.0101 51 1 0.3962 -2.6265 3.0350 52 1 2.0514 -1.9877 3.4268 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11572880_9818708.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:43 Heat of formation + Delta-G solvation = -17.725193 kcal Electronic energy + Delta-G solvation = -32120.427378 eV Core-core repulsion = 27860.293085 eV Total energy + Delta-G solvation = -4260.134294 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.193 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -42.48147 -41.34857 -40.19751 -38.37705 -38.00778 -37.52584 -34.83235 -34.06329 -33.40830 -31.33280 -30.11918 -29.05435 -28.50400 -28.45851 -26.79436 -26.09038 -24.91217 -23.58492 -22.60258 -21.77986 -21.30513 -20.80835 -20.54636 -18.58679 -18.49288 -18.05388 -17.64870 -17.31682 -16.97159 -16.43114 -16.29175 -16.26740 -15.97263 -15.82767 -15.50623 -15.38036 -15.07579 -14.73629 -14.61534 -14.48764 -14.39835 -14.15716 -13.98982 -13.70230 -13.57488 -13.41528 -13.34397 -13.15712 -12.97275 -12.77725 -12.69680 -12.59487 -12.46417 -12.39457 -12.27777 -12.19455 -11.87407 -11.85708 -11.62210 -11.41580 -11.05866 -10.49672 -10.41009 -10.34784 -10.17355 -9.01814 -8.52610 -4.86163 0.28490 0.80459 1.38547 1.39089 1.43033 1.62423 1.70823 2.02979 2.08911 2.68616 3.12237 3.29405 3.40571 3.50021 3.51883 3.59714 3.70213 3.73743 3.75271 3.80486 3.82509 3.86724 3.87926 4.00026 4.07200 4.19848 4.32220 4.38102 4.49298 4.53551 4.56707 4.60273 4.60463 4.68597 4.69432 4.73195 4.78449 4.81830 4.82284 4.88119 4.90696 4.91625 4.95880 5.00379 5.06533 5.22578 5.25623 5.26470 5.35709 5.65464 5.81699 5.87229 5.90736 6.16488 6.29087 6.32994 6.37732 6.60175 7.01050 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.177 4.177 5 O -0.360 6.360 6 C 0.065 3.935 7 H 0.095 0.905 8 C -0.167 4.167 9 C 0.125 3.875 10 H 0.118 0.882 11 N -0.716 5.716 12 C 0.492 3.508 13 O -0.512 6.512 14 C 0.091 3.909 15 N -0.465 5.465 16 C 0.066 3.934 17 C -0.193 4.193 18 C -0.037 4.037 19 O -0.531 6.531 20 Si 0.682 3.318 21 C -0.086 4.086 22 C -0.065 4.065 23 C -0.146 4.146 24 C -0.097 4.097 25 C -0.128 4.128 26 C 0.109 3.891 27 C -0.143 4.143 28 H 0.065 0.935 29 H 0.068 0.932 30 H 0.059 0.941 31 H 0.063 0.937 32 H 0.071 0.929 33 H 0.063 0.937 34 H 0.058 0.942 35 H 0.067 0.933 36 H 0.064 0.936 37 H 0.093 0.907 38 H 0.074 0.926 39 H 0.403 0.597 40 H 0.122 0.878 41 H 0.118 0.882 42 H 0.168 0.832 43 H 0.114 0.886 44 H 0.372 0.628 45 H -0.256 1.256 46 H -0.260 1.260 47 H 0.123 0.877 48 H 0.123 0.877 49 H 0.125 0.875 50 H 0.114 0.886 51 H 0.081 0.919 52 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.315 6.388 0.787 6.570 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.234 4.234 5 O -0.279 6.279 6 C 0.006 3.994 7 H 0.113 0.887 8 C -0.206 4.206 9 C 0.020 3.980 10 H 0.136 0.864 11 N -0.369 5.369 12 C 0.276 3.724 13 O -0.386 6.386 14 C -0.035 4.035 15 N -0.149 5.149 16 C -0.059 4.059 17 C -0.201 4.201 18 C -0.147 4.147 19 O -0.337 6.337 20 Si 0.584 3.416 21 C -0.090 4.090 22 C -0.083 4.083 23 C -0.165 4.165 24 C -0.116 4.116 25 C -0.148 4.148 26 C 0.004 3.996 27 C -0.181 4.181 28 H 0.084 0.916 29 H 0.087 0.913 30 H 0.078 0.922 31 H 0.082 0.918 32 H 0.090 0.910 33 H 0.083 0.917 34 H 0.078 0.922 35 H 0.086 0.914 36 H 0.083 0.917 37 H 0.112 0.888 38 H 0.093 0.907 39 H 0.238 0.762 40 H 0.140 0.860 41 H 0.135 0.865 42 H 0.185 0.815 43 H 0.132 0.868 44 H 0.220 0.780 45 H -0.180 1.180 46 H -0.185 1.185 47 H 0.141 0.859 48 H 0.141 0.859 49 H 0.143 0.857 50 H 0.132 0.868 51 H 0.100 0.900 52 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -2.107 5.723 0.716 6.140 hybrid contribution 1.060 0.405 0.676 1.321 sum -1.047 6.128 1.392 6.370 Atomic orbital electron populations 1.22476 0.95548 1.02516 1.03161 1.21555 0.93170 0.93240 0.85417 1.21770 1.02018 0.93151 1.02674 1.22475 1.02311 1.00811 0.97837 1.88022 1.73765 1.23075 1.43020 1.23374 0.96979 0.82055 0.96945 0.88744 1.24061 0.99964 0.96911 0.99631 1.22230 0.92158 0.93679 0.89938 0.86431 1.45877 1.46034 1.08046 1.36907 1.21018 0.83244 0.82547 0.85556 1.90807 1.49983 1.59926 1.37834 1.21597 1.01401 0.80240 1.00312 1.43207 1.34953 1.04042 1.32665 1.21580 0.97984 0.87233 0.99084 1.20577 1.03208 0.94122 1.02162 1.24283 0.99395 0.92000 0.99059 1.86606 1.60623 1.47544 1.38921 0.95030 0.81846 0.82351 0.82416 1.18937 0.99414 0.91694 0.98977 1.20307 0.94761 0.99150 0.94124 1.20671 1.00218 0.95273 1.00316 1.20827 0.98959 0.93180 0.98618 1.19956 0.98042 0.99377 0.97429 1.18170 0.95463 0.91908 0.94010 1.23611 1.02350 0.94734 0.97391 0.91564 0.91272 0.92177 0.91763 0.90985 0.91744 0.92248 0.91440 0.91680 0.88839 0.90697 0.76189 0.85989 0.86452 0.81464 0.86793 0.78038 1.18038 1.18536 0.85909 0.85929 0.85745 0.86770 0.90024 0.88515 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.24 8.38 37.16 0.31 0.56 16 2 C 0.11 -0.06 1.11 -90.62 -0.10 -0.16 16 3 C -0.14 0.14 8.84 37.15 0.33 0.47 16 4 C -0.18 0.18 8.38 37.16 0.31 0.49 16 5 O -0.36 -0.19 10.00 -35.23 -0.35 -0.54 16 6 C 0.07 -0.08 2.82 -25.83 -0.07 -0.15 16 7 H 0.09 -0.16 5.54 -51.93 -0.29 -0.45 16 8 C -0.17 0.17 7.73 -25.83 -0.20 -0.03 16 9 C 0.12 -0.19 4.21 -67.12 -0.28 -0.47 16 10 H 0.12 0.01 7.50 -51.93 -0.39 -0.38 16 11 N -0.72 1.81 5.36 -53.02 -0.28 1.53 16 12 C 0.49 -0.03 7.90 -10.98 -0.09 -0.12 16 13 O -0.51 -2.44 16.04 5.56 0.09 -2.35 16 14 C 0.09 -0.21 6.48 -5.19 -0.03 -0.24 16 15 N -0.47 -0.65 2.27 -115.71 -0.26 -0.91 16 16 C 0.07 0.07 9.89 -16.73 -0.17 -0.09 16 17 C -0.19 -0.49 5.57 -102.71 -0.57 -1.07 16 18 C -0.04 -0.06 3.06 36.01 0.11 0.05 16 19 O -0.53 -1.44 12.88 -35.23 -0.45 -1.89 16 20 Si 0.68 -0.02 30.82 -169.99 -5.24 -5.26 16 21 C -0.09 -0.37 6.35 -105.14 -0.67 -1.04 16 22 C -0.06 -0.24 10.05 -39.65 -0.40 -0.64 16 23 C -0.15 -0.40 9.97 -39.95 -0.40 -0.80 16 24 C -0.10 -0.23 10.01 -39.54 -0.40 -0.62 16 25 C -0.13 -0.35 10.00 -39.43 -0.39 -0.74 16 26 C 0.11 0.39 6.80 -83.99 -0.57 -0.18 16 27 C -0.14 0.33 7.66 -25.92 -0.20 0.14 16 28 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 30 H 0.06 -0.10 6.24 -51.93 -0.32 -0.42 16 31 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 33 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.06 -0.06 7.02 -51.93 -0.36 -0.43 16 35 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 39 H 0.40 -2.16 8.71 -40.82 -0.36 -2.51 16 40 H 0.12 -0.67 8.12 -51.93 -0.42 -1.09 16 41 H 0.12 -0.50 8.14 -51.93 -0.42 -0.92 16 42 H 0.17 -0.26 6.27 -52.49 -0.33 -0.59 16 43 H 0.11 0.17 7.96 -51.93 -0.41 -0.25 16 44 H 0.37 -0.13 8.70 45.56 0.40 0.27 16 45 H -0.26 -0.80 7.11 56.52 0.40 -0.40 16 46 H -0.26 -0.22 7.00 56.52 0.40 0.18 16 47 H 0.12 0.34 8.06 -52.49 -0.42 -0.08 16 48 H 0.12 0.10 8.06 -52.48 -0.42 -0.33 16 49 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 50 H 0.11 0.10 8.06 -52.49 -0.42 -0.32 16 51 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 52 H 0.10 -0.26 8.11 -51.93 -0.42 -0.68 16 LS Contribution 422.68 15.07 6.37 6.37 Total: 0.00 -9.53 422.68 -12.07 -21.59 By element: Atomic # 1 Polarization: -5.44 SS G_CDS: -8.46 Total: -13.89 kcal Atomic # 6 Polarization: -1.17 SS G_CDS: -3.48 Total: -4.65 kcal Atomic # 7 Polarization: 1.16 SS G_CDS: -0.55 Total: 0.62 kcal Atomic # 8 Polarization: -4.07 SS G_CDS: -0.72 Total: -4.78 kcal Atomic # 14 Polarization: -0.02 SS G_CDS: -5.24 Total: -5.26 kcal Total LS contribution 6.37 Total: 6.37 kcal Total: -9.53 -12.07 -21.59 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11572880_9818708.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.870 kcal (2) G-P(sol) polarization free energy of solvation -9.528 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.658 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.067 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.595 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.725 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds