Wall clock time and date at job start Tue Mar 9 2021 12:55:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86301 * 109.47248 * 2 1 4 4 C 1.50697 * 109.46840 * 240.00128 * 2 1 3 5 5 C 1.34239 * 126.50047 * 104.97518 * 4 2 1 6 6 N 1.36837 * 109.93723 * 180.02562 * 5 4 2 7 7 C 1.46500 * 125.06162 * 179.97438 * 6 5 4 8 8 C 1.50696 * 109.47324 * 265.02586 * 7 6 5 9 9 O 1.21284 * 120.00109 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00137 * 179.97438 * 8 7 6 11 11 C 1.46506 * 119.99873 * 179.97438 * 10 8 7 12 12 H 1.08993 * 112.85127 * 336.19946 * 11 10 8 13 13 C 1.53786 * 113.61017 * 107.50857 * 11 10 8 14 14 C 1.53775 * 87.07996 * 139.98085 * 13 11 10 15 15 H 1.08997 * 113.61978 * 89.11080 * 14 13 11 16 16 N 1.46901 * 113.69166 * 220.00395 * 14 13 11 17 17 H 1.00892 * 110.19686 * 279.30948 * 16 14 13 18 18 C 1.48536 * 110.16655 * 41.15202 * 16 14 13 19 19 C 1.54938 * 103.22415 * 158.27760 * 18 16 14 20 20 C 1.54591 * 102.92470 * 322.58663 * 19 18 16 21 21 C 1.47898 * 110.17359 * 157.53355 * 16 14 13 22 22 C 1.53780 * 113.61267 * 205.00064 * 11 10 8 23 23 C 1.37690 * 109.87802 * 0.23035 * 6 5 4 24 24 C 1.39081 * 133.51373 * 180.39305 * 23 6 5 25 25 C 1.37788 * 119.77878 * 179.64692 * 24 23 6 26 26 C 1.38785 * 120.66660 * 359.75780 * 25 24 23 27 27 C 1.36666 * 120.52952 * 0.02562 * 26 25 24 28 28 C 1.39591 * 119.76206 * 359.97438 * 27 26 25 29 29 H 0.96701 * 113.99912 * 59.99647 * 1 2 3 30 30 H 1.08994 * 109.47183 * 120.00584 * 2 1 3 31 31 H 1.48503 * 109.99885 * 298.68504 * 3 2 1 32 32 H 1.48495 * 109.99983 * 60.00069 * 3 2 1 33 33 H 1.08001 * 125.02943 * 0.02562 * 5 4 2 34 34 H 1.09004 * 109.47042 * 145.02608 * 7 6 5 35 35 H 1.09000 * 109.47175 * 25.02566 * 7 6 5 36 36 H 0.96995 * 120.00018 * 0.27749 * 10 8 7 37 37 H 1.09000 * 113.60786 * 254.52683 * 13 11 10 38 38 H 1.08992 * 113.61826 * 25.42866 * 13 11 10 39 39 H 1.08999 * 110.66874 * 276.71008 * 18 16 14 40 40 H 1.09003 * 110.67100 * 39.84715 * 18 16 14 41 41 H 1.09009 * 110.72575 * 204.22626 * 19 18 16 42 42 H 1.09010 * 110.87695 * 81.01866 * 19 18 16 43 43 H 1.08998 * 110.31117 * 263.04033 * 20 19 18 44 44 H 1.09003 * 110.30815 * 140.87007 * 20 19 18 45 45 H 1.09006 * 109.92034 * 334.95008 * 21 16 14 46 46 H 1.08997 * 109.92036 * 96.24847 * 21 16 14 47 47 H 1.09001 * 113.61735 * 334.56911 * 22 11 10 48 48 H 1.09000 * 113.61107 * 105.47527 * 22 11 10 49 49 H 1.08003 * 120.10901 * 359.41005 * 24 23 6 50 50 H 1.08001 * 119.66732 * 179.73395 * 25 24 23 51 51 H 1.07994 * 119.73448 * 180.02562 * 26 25 24 52 52 H 1.07995 * 120.11500 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4603 -0.1375 -2.3232 6 7 2.8019 -1.0989 -3.2350 7 6 3.4056 -0.8402 -4.5445 8 6 2.3251 -0.7835 -5.5935 9 8 1.1649 -0.9439 -5.2784 10 7 2.6479 -0.5545 -6.8818 11 6 1.5975 -0.4999 -7.9016 12 1 0.6981 -1.0435 -7.6124 13 6 1.3204 0.9193 -8.4251 14 6 1.1855 0.2925 -9.8228 15 1 0.1727 -0.0334 -10.0594 16 7 1.7897 1.0987 -10.8920 17 1 1.1635 1.8415 -11.1643 18 6 3.0873 1.6613 -10.4381 19 6 3.8249 1.9669 -11.7660 20 6 3.4113 0.7841 -12.6714 21 6 2.1059 0.2451 -12.0577 22 6 2.0945 -0.8399 -9.3166 23 6 2.4884 -2.3453 -2.7409 24 6 2.6274 -3.6360 -3.2400 25 6 2.2136 -4.7106 -2.4833 26 6 1.6630 -4.5193 -1.2238 27 6 1.5211 -3.2600 -0.7121 28 6 1.9337 -2.1570 -1.4616 29 1 -0.3933 0.4418 -0.7650 30 1 1.7923 -0.5139 0.8899 31 1 1.5879 2.4586 -1.2242 32 1 1.5616 2.4679 1.2085 33 1 2.5962 0.9249 -2.4620 34 1 4.1052 -1.6403 -4.7865 35 1 3.9367 0.1113 -4.5182 36 1 3.5761 -0.4303 -7.1345 37 1 0.3927 1.3501 -8.0484 38 1 2.1711 1.5939 -8.3293 39 1 2.9311 2.5755 -9.8656 40 1 3.6402 0.9281 -9.8509 41 1 4.9043 1.9774 -11.6141 42 1 3.4872 2.9131 -12.1890 43 1 4.1811 0.0125 -12.6610 44 1 3.2356 1.1308 -13.6898 45 1 2.2455 -0.7868 -11.7354 46 1 1.3001 0.3026 -12.7895 47 1 3.1569 -0.6462 -9.4646 48 1 1.7917 -1.8292 -9.6598 49 1 3.0548 -3.7952 -4.2190 50 1 2.3185 -5.7118 -2.8744 51 1 1.3441 -5.3723 -0.6434 52 1 1.0922 -3.1189 0.2689 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11618796_9818708.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:45 Heat of formation + Delta-G solvation = 142.638679 kcal Electronic energy + Delta-G solvation = -32098.460528 eV Core-core repulsion = 27956.654535 eV Total energy + Delta-G solvation = -4141.805993 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.197 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -43.36713 -42.54977 -40.75165 -38.72797 -38.18842 -37.70313 -34.96548 -34.11017 -33.02661 -31.44269 -30.76235 -30.27465 -29.05370 -27.20186 -26.31583 -25.33025 -24.21286 -23.71394 -22.75739 -22.48426 -21.77226 -20.91276 -20.59906 -19.56087 -18.78977 -18.59625 -18.40072 -17.73727 -17.30926 -16.88017 -16.50928 -16.39572 -16.37418 -16.20836 -16.01457 -15.70397 -15.41759 -15.30594 -14.88557 -14.76558 -14.66006 -14.41479 -14.12391 -14.02569 -13.89452 -13.64713 -13.48287 -13.15942 -13.01578 -12.80012 -12.74041 -12.63689 -12.60974 -12.41893 -12.38035 -12.28074 -12.04444 -11.95296 -11.76941 -11.66561 -11.20049 -10.58585 -10.48657 -10.25853 -9.19155 -8.65943 -4.91702 0.10632 0.59615 0.83089 1.31817 1.37561 1.42216 1.54863 1.66584 2.00288 2.13891 2.38290 2.62713 2.77557 2.91319 3.06203 3.34940 3.46167 3.48251 3.56186 3.60576 3.66691 3.68197 3.73758 3.82233 3.83258 3.92299 3.97402 4.02216 4.10297 4.16662 4.19436 4.26546 4.34266 4.36403 4.39539 4.46753 4.49234 4.55039 4.60074 4.68258 4.69475 4.73798 4.76343 4.86445 4.88193 4.95389 5.08597 5.09156 5.10804 5.14616 5.33455 5.46940 5.62894 5.68270 5.71650 6.15393 6.20378 6.41804 6.53263 7.09939 Molecular weight = 357.20amu Principal moments of inertia in cm(-1) A = 0.013742 B = 0.002379 C = 0.002150 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2037.103780 B =11766.096506 C =13019.726643 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.062 4.062 3 Si 0.790 3.210 4 C -0.219 4.219 5 C 0.081 3.919 6 N -0.465 5.465 7 C 0.081 3.919 8 C 0.494 3.506 9 O -0.570 6.570 10 N -0.699 5.699 11 C 0.112 3.888 12 H 0.092 0.908 13 C -0.161 4.161 14 C 0.028 3.972 15 H 0.173 0.827 16 N -0.368 5.368 17 H 0.443 0.557 18 C -0.010 4.010 19 C -0.146 4.146 20 C -0.148 4.148 21 C -0.001 4.001 22 C -0.148 4.148 23 C 0.095 3.905 24 C -0.128 4.128 25 C -0.109 4.109 26 C -0.157 4.157 27 C -0.093 4.093 28 C -0.119 4.119 29 H 0.381 0.619 30 H 0.101 0.899 31 H -0.260 1.260 32 H -0.314 1.314 33 H 0.203 0.797 34 H 0.144 0.856 35 H 0.168 0.832 36 H 0.425 0.575 37 H 0.085 0.915 38 H 0.132 0.868 39 H 0.149 0.851 40 H 0.143 0.857 41 H 0.101 0.899 42 H 0.092 0.908 43 H 0.092 0.908 44 H 0.088 0.912 45 H 0.135 0.865 46 H 0.141 0.859 47 H 0.136 0.864 48 H 0.106 0.894 49 H 0.141 0.859 50 H 0.144 0.856 51 H 0.129 0.871 52 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.323 9.977 -33.969 36.369 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.170 4.170 3 Si 0.693 3.307 4 C -0.227 4.227 5 C -0.045 4.045 6 N -0.147 5.147 7 C -0.043 4.043 8 C 0.280 3.720 9 O -0.448 6.448 10 N -0.353 5.353 11 C 0.006 3.994 12 H 0.110 0.890 13 C -0.200 4.200 14 C -0.075 4.075 15 H 0.190 0.810 16 N 0.052 4.948 17 H 0.282 0.718 18 C -0.131 4.131 19 C -0.184 4.184 20 C -0.186 4.186 21 C -0.122 4.122 22 C -0.186 4.186 23 C -0.011 4.011 24 C -0.148 4.148 25 C -0.129 4.129 26 C -0.176 4.176 27 C -0.111 4.111 28 C -0.123 4.123 29 H 0.230 0.770 30 H 0.119 0.881 31 H -0.185 1.185 32 H -0.243 1.243 33 H 0.220 0.780 34 H 0.162 0.838 35 H 0.185 0.815 36 H 0.265 0.735 37 H 0.104 0.896 38 H 0.150 0.850 39 H 0.166 0.834 40 H 0.161 0.839 41 H 0.120 0.880 42 H 0.111 0.889 43 H 0.110 0.890 44 H 0.106 0.894 45 H 0.153 0.847 46 H 0.159 0.841 47 H 0.153 0.847 48 H 0.124 0.876 49 H 0.159 0.841 50 H 0.162 0.838 51 H 0.147 0.853 52 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 7.654 10.251 -33.434 35.798 hybrid contribution -1.522 -0.367 -0.037 1.566 sum 6.132 9.884 -33.471 35.434 Atomic orbital electron populations 1.86586 1.19650 1.80589 1.49710 1.24768 0.82517 1.12425 0.97251 0.94209 0.89446 0.70071 0.76994 1.20697 1.11251 0.91846 0.98857 1.22002 0.99045 0.95175 0.88236 1.43400 1.53274 1.03342 1.14722 1.22105 0.94143 1.09405 0.78631 1.21395 0.90113 0.75523 0.85010 1.90856 1.22554 1.49605 1.81772 1.45609 1.11669 1.72665 1.05374 1.22206 0.92548 0.97592 0.87090 0.89014 1.24138 1.06129 0.98058 0.91695 1.24566 1.02252 0.94289 0.86422 0.80964 1.45954 1.16845 1.17448 1.14519 0.71809 1.24972 0.82628 1.04791 1.00698 1.22895 1.03375 0.99555 0.92554 1.22697 0.95963 0.98961 1.01010 1.24367 1.02153 0.97983 0.87738 1.23989 1.02038 0.99953 0.92588 1.18322 1.01579 0.87216 0.93934 1.20217 1.04738 0.88746 1.01147 1.21135 0.98236 0.99344 0.94138 1.20906 1.02500 0.96886 0.97311 1.20440 0.99181 0.92043 0.99478 1.19364 1.03909 0.93749 0.95274 0.77007 0.88081 1.18527 1.24305 0.78048 0.83818 0.81454 0.73545 0.89616 0.84962 0.83354 0.83938 0.88023 0.88939 0.88959 0.89350 0.84726 0.84064 0.84650 0.87560 0.84115 0.83801 0.85303 0.87122 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 2.87 12.88 -148.98 -1.92 0.95 16 2 C -0.06 0.62 3.06 71.23 0.22 0.83 16 3 Si 0.79 -12.44 30.82 68.60 2.11 -10.33 16 4 C -0.22 2.29 5.57 -18.63 -0.10 2.18 16 5 C 0.08 -1.43 9.89 83.00 0.82 -0.61 16 6 N -0.46 8.83 2.27 -519.99 -1.18 7.65 16 7 C 0.08 -2.58 6.48 85.63 0.55 -2.02 16 8 C 0.49 -14.64 7.90 87.66 0.69 -13.94 16 9 O -0.57 9.08 16.02 -3.04 -0.05 9.03 16 10 N -0.70 29.37 5.36 -440.03 -2.36 27.01 16 11 C 0.11 -4.99 4.24 45.52 0.19 -4.80 16 12 H 0.09 -3.24 7.46 -2.39 -0.02 -3.26 16 13 C -0.16 8.40 7.21 31.12 0.22 8.62 16 14 C 0.03 -1.65 3.96 45.44 0.18 -1.47 16 15 H 0.17 -10.35 8.14 -2.39 -0.02 -10.37 16 16 N -0.37 23.68 0.78 -854.80 -0.66 23.01 16 17 H 0.44 -30.18 8.66 -89.70 -0.78 -30.96 16 18 C -0.01 0.63 4.73 86.65 0.41 1.04 16 19 C -0.15 8.13 7.06 31.80 0.22 8.35 16 20 C -0.15 8.10 6.93 31.47 0.22 8.32 16 21 C 0.00 0.07 6.34 86.45 0.55 0.62 16 22 C -0.15 8.11 5.74 31.12 0.18 8.29 16 23 C 0.09 -1.05 6.80 39.03 0.27 -0.79 16 24 C -0.13 1.66 10.00 22.37 0.22 1.88 16 25 C -0.11 1.16 10.01 22.29 0.22 1.38 16 26 C -0.16 1.08 9.97 22.03 0.22 1.30 16 27 C -0.09 0.37 10.05 22.23 0.22 0.59 16 28 C -0.12 0.69 6.35 -20.20 -0.13 0.56 16 29 H 0.38 -4.33 8.70 -74.06 -0.64 -4.97 16 30 H 0.10 -0.86 7.96 -2.39 -0.02 -0.88 16 31 H -0.26 4.26 7.00 99.48 0.70 4.95 16 32 H -0.31 1.81 7.11 99.48 0.71 2.52 16 33 H 0.20 -5.14 6.27 -2.91 -0.02 -5.16 16 34 H 0.14 -5.22 8.14 -2.38 -0.02 -5.24 16 35 H 0.17 -6.80 8.12 -2.39 -0.02 -6.82 16 36 H 0.43 -21.42 8.72 -92.71 -0.81 -22.23 16 37 H 0.09 -3.95 8.14 -2.39 -0.02 -3.97 16 38 H 0.13 -7.49 6.04 -2.39 -0.01 -7.50 16 39 H 0.15 -9.48 7.44 -2.39 -0.02 -9.50 16 40 H 0.14 -9.14 5.56 -2.39 -0.01 -9.15 16 41 H 0.10 -5.30 8.14 -2.38 -0.02 -5.32 16 42 H 0.09 -4.98 8.14 -2.38 -0.02 -5.00 16 43 H 0.09 -4.78 8.14 -2.39 -0.02 -4.80 16 44 H 0.09 -4.47 8.14 -2.39 -0.02 -4.49 16 45 H 0.13 -8.21 6.64 -2.38 -0.02 -8.23 16 46 H 0.14 -8.71 8.14 -2.39 -0.02 -8.73 16 47 H 0.14 -8.12 6.00 -2.39 -0.01 -8.13 16 48 H 0.11 -5.56 8.14 -2.39 -0.02 -5.58 16 49 H 0.14 -2.79 8.06 -2.91 -0.02 -2.81 16 50 H 0.14 -2.21 8.06 -2.91 -0.02 -2.24 16 51 H 0.13 -1.22 8.06 -2.91 -0.02 -1.24 16 52 H 0.11 -0.37 8.06 -2.91 -0.02 -0.39 16 Total: 1.00 -91.91 407.59 0.09 -91.83 By element: Atomic # 1 Polarization: -168.25 SS G_CDS: -1.25 Total: -169.50 kcal Atomic # 6 Polarization: 14.96 SS G_CDS: 5.39 Total: 20.35 kcal Atomic # 7 Polarization: 61.88 SS G_CDS: -4.20 Total: 57.68 kcal Atomic # 8 Polarization: 11.95 SS G_CDS: -1.97 Total: 9.98 kcal Atomic # 14 Polarization: -12.44 SS G_CDS: 2.11 Total: -10.33 kcal Total: -91.91 0.09 -91.83 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11618796_9818708.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 234.465 kcal (2) G-P(sol) polarization free energy of solvation -91.912 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 142.553 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.086 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -91.826 kcal (6) G-S(sol) free energy of system = (1) + (5) 142.639 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds