Wall clock time and date at job start Tue Mar 9 2021 13:43:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.37890 * 126.45807 * 2 1 4 4 C 1.46642 * 126.23240 * 359.97438 * 3 2 1 5 5 O 1.21700 * 120.00421 * 359.71561 * 4 3 2 6 6 N 1.34781 * 120.00034 * 179.71887 * 4 3 2 7 7 C 1.39829 * 120.00105 * 184.62085 * 6 4 3 8 8 C 1.38899 * 120.07402 * 144.90439 * 7 6 4 9 9 C 1.38108 * 119.92996 * 180.02562 * 8 7 6 10 10 C 1.38287 * 120.06759 * 359.97438 * 9 8 7 11 11 C 1.50705 * 119.92075 * 179.72537 * 10 9 8 12 12 C 1.52996 * 109.47275 * 89.99862 * 11 10 9 13 13 Si 1.86298 * 109.46935 * 179.97438 * 12 11 10 14 14 C 1.86303 * 109.47091 * 60.00455 * 13 12 11 15 15 C 1.86307 * 109.47006 * 179.97438 * 13 12 11 16 16 C 1.86297 * 109.47552 * 300.00062 * 13 12 11 17 17 C 1.38283 * 120.14868 * 359.97438 * 10 9 8 18 18 C 1.38105 * 120.07345 * 0.02562 * 17 10 9 19 19 N 1.37643 * 107.53034 * 179.71806 * 3 2 1 20 20 C 1.35542 * 108.64846 * 0.26117 * 19 3 2 21 21 C 1.50694 * 125.57057 * 179.97438 * 20 19 3 22 22 O 1.42903 * 109.47494 * 120.02152 * 21 20 19 23 23 Si 1.86303 * 109.46771 * 0.02562 * 21 20 19 24 24 H 1.48496 * 109.47430 * 60.00015 * 23 21 20 25 25 H 1.48508 * 109.47090 * 180.02562 * 23 21 20 26 26 H 1.48504 * 109.47201 * 299.99749 * 23 21 20 27 27 C 1.35462 * 108.86889 * 359.97438 * 20 19 3 28 28 H 1.09000 * 109.47052 * 89.99900 * 1 2 3 29 29 H 1.09004 * 109.47168 * 210.00241 * 1 2 3 30 30 H 1.08996 * 109.47228 * 330.00567 * 1 2 3 31 31 H 0.97001 * 119.99749 * 4.61912 * 6 4 3 32 32 H 1.08003 * 120.03586 * 359.97438 * 8 7 6 33 33 H 1.07996 * 119.96342 * 179.97438 * 9 8 7 34 34 H 1.09000 * 109.46382 * 209.99655 * 11 10 9 35 35 H 1.08996 * 109.47340 * 329.99511 * 11 10 9 36 36 H 1.09000 * 109.47108 * 299.99798 * 12 11 10 37 37 H 1.09002 * 109.47207 * 60.00045 * 12 11 10 38 38 H 1.09000 * 109.47295 * 59.99518 * 14 13 12 39 39 H 1.09000 * 109.46967 * 180.02562 * 14 13 12 40 40 H 1.09006 * 109.46375 * 299.99385 * 14 13 12 41 41 H 1.08996 * 109.47157 * 60.00047 * 15 13 12 42 42 H 1.08996 * 109.46902 * 180.02562 * 15 13 12 43 43 H 1.09000 * 109.47102 * 300.00312 * 15 13 12 44 44 H 1.08998 * 109.46861 * 59.99527 * 16 13 12 45 45 H 1.08996 * 109.47127 * 180.02562 * 16 13 12 46 46 H 1.08996 * 109.46847 * 300.00097 * 16 13 12 47 47 H 1.08008 * 119.95949 * 180.02562 * 17 10 9 48 48 H 1.07999 * 120.03197 * 180.02562 * 18 17 10 49 49 H 0.97009 * 125.67864 * 180.29513 * 19 3 2 50 50 H 1.08997 * 109.47153 * 240.02682 * 21 20 19 51 51 H 0.96697 * 113.99889 * 300.00576 * 22 21 20 52 52 H 1.08001 * 126.06750 * 179.97438 * 27 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3265 1.1090 0.0000 4 6 1.8901 2.5091 -0.0005 5 8 0.7029 2.7765 -0.0063 6 7 2.8040 3.4997 0.0053 7 6 2.3904 4.8319 0.1023 8 6 3.1599 5.7502 0.8051 9 6 2.7483 7.0651 0.8995 10 6 1.5716 7.4679 0.2948 11 6 1.1224 8.9022 0.4052 12 6 1.6985 9.7083 -0.7606 13 14 1.1426 11.4811 -0.6245 14 6 1.7460 12.1994 0.9851 15 6 1.8447 12.4628 -2.0438 16 6 -0.7182 11.5544 -0.6785 17 6 0.8037 6.5565 -0.4065 18 6 1.2097 5.2401 -0.5047 19 7 3.6284 0.6626 0.0065 20 6 3.6219 -0.6928 0.0045 21 6 4.8433 -1.5754 0.0094 22 8 4.8289 -2.4024 1.1747 23 14 6.3753 -0.5153 0.0193 24 1 6.3777 0.3399 1.2333 25 1 7.5791 -1.3849 0.0235 26 1 6.3904 0.3442 -1.1917 27 6 2.3379 -1.1247 -0.0025 28 1 -0.3633 0.0000 -1.0277 29 1 -0.3634 -0.8900 0.5139 30 1 -0.3633 0.8900 0.5137 31 1 3.7486 3.2885 -0.0579 32 1 4.0787 5.4361 1.2779 33 1 3.3459 7.7795 1.4461 34 1 0.0337 8.9453 0.3738 35 1 1.4757 9.3222 1.3469 36 1 2.7872 9.6651 -0.7293 37 1 1.3452 9.2883 -1.7024 38 1 2.8347 12.1565 1.0166 39 1 1.4203 13.2365 1.0649 40 1 1.3355 11.6251 1.8156 41 1 1.4921 12.0428 -2.9857 42 1 1.5198 13.5002 -1.9639 43 1 2.9334 12.4199 -2.0118 44 1 -1.1286 10.9801 0.1521 45 1 -1.0434 12.5918 -0.5993 46 1 -1.0712 11.1343 -1.6202 47 1 -0.1145 6.8745 -0.8779 48 1 0.6097 4.5289 -1.0529 49 1 4.4192 1.2244 0.0120 50 1 4.8416 -2.2031 -0.8817 51 1 4.8295 -1.9097 2.0067 52 1 2.0136 -2.1548 -0.0059 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11757974_13940406.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:43:45 Heat of formation + Delta-G solvation = -52.879705 kcal Electronic energy + Delta-G solvation = -28903.761543 eV Core-core repulsion = 24991.653544 eV Total energy + Delta-G solvation = -3912.108000 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 360.178 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.73959 -41.20801 -39.49887 -37.85597 -36.42861 -34.16460 -33.57077 -31.84226 -31.57483 -29.79356 -29.10463 -28.42309 -28.41515 -28.33568 -26.87079 -24.54341 -23.87571 -22.68951 -21.84557 -21.40527 -20.45754 -19.89172 -18.43484 -18.05333 -17.01385 -16.89577 -16.62252 -16.39467 -15.91650 -15.59935 -15.43383 -14.91825 -14.87140 -14.69128 -14.53361 -14.46799 -14.19672 -14.17176 -14.00374 -13.87213 -13.83893 -13.70807 -13.52808 -13.42447 -13.31768 -13.20624 -13.09166 -13.04245 -12.92771 -12.67867 -12.55850 -12.48493 -12.28326 -12.20962 -11.76642 -11.28431 -10.93283 -10.80800 -10.78624 -10.69347 -10.46141 -9.83965 -9.80126 -9.30382 -8.89999 0.08153 0.51025 0.55462 0.78937 1.07948 1.11210 1.56615 1.58265 1.80908 1.81934 1.88162 1.88854 1.90713 2.25368 2.64217 2.90143 3.21235 3.51657 3.63138 3.92353 4.05122 4.12776 4.14869 4.22515 4.29132 4.35637 4.46849 4.51399 4.58312 4.64879 4.71007 4.71770 4.73974 4.75474 4.76103 4.76750 4.77434 4.88699 4.90972 5.00384 5.05417 5.15439 5.18796 5.35292 5.38063 5.39981 5.42323 5.50484 5.55062 5.56249 5.57682 5.65537 5.80212 5.87868 6.10006 6.13522 6.29665 6.33717 6.99653 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.061 4.061 3 C -0.056 4.056 4 C 0.591 3.409 5 O -0.502 6.502 6 N -0.677 5.677 7 C 0.134 3.866 8 C -0.141 4.141 9 C -0.101 4.101 10 C -0.086 4.086 11 C -0.071 4.071 12 C -0.405 4.405 13 Si 1.007 2.993 14 C -0.451 4.451 15 C -0.451 4.451 16 C -0.451 4.451 17 C -0.101 4.101 18 C -0.114 4.114 19 N -0.542 5.542 20 C 0.017 3.983 21 C -0.051 4.051 22 O -0.529 6.529 23 Si 0.921 3.079 24 H -0.247 1.247 25 H -0.233 1.233 26 H -0.246 1.246 27 C -0.169 4.169 28 H 0.071 0.929 29 H 0.066 0.934 30 H 0.081 0.919 31 H 0.402 0.598 32 H 0.122 0.878 33 H 0.126 0.874 34 H 0.074 0.926 35 H 0.073 0.927 36 H 0.075 0.925 37 H 0.076 0.924 38 H 0.067 0.933 39 H 0.067 0.933 40 H 0.068 0.932 41 H 0.068 0.932 42 H 0.068 0.932 43 H 0.067 0.933 44 H 0.069 0.931 45 H 0.067 0.933 46 H 0.068 0.932 47 H 0.126 0.874 48 H 0.139 0.861 49 H 0.409 0.591 50 H 0.132 0.868 51 H 0.379 0.621 52 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.852 1.019 -0.015 3.985 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.070 4.070 3 C -0.168 4.168 4 C 0.381 3.619 5 O -0.376 6.376 6 N -0.321 5.321 7 C 0.041 3.959 8 C -0.162 4.162 9 C -0.120 4.120 10 C -0.087 4.087 11 C -0.108 4.108 12 C -0.490 4.490 13 Si 1.203 2.797 14 C -0.558 4.558 15 C -0.559 4.559 16 C -0.558 4.558 17 C -0.120 4.120 18 C -0.134 4.134 19 N -0.143 5.143 20 C -0.099 4.099 21 C -0.163 4.163 22 O -0.333 6.333 23 Si 0.741 3.259 24 H -0.171 1.171 25 H -0.156 1.156 26 H -0.169 1.169 27 C -0.194 4.194 28 H 0.089 0.911 29 H 0.085 0.915 30 H 0.100 0.900 31 H 0.237 0.763 32 H 0.140 0.860 33 H 0.144 0.856 34 H 0.092 0.908 35 H 0.092 0.908 36 H 0.094 0.906 37 H 0.095 0.905 38 H 0.086 0.914 39 H 0.086 0.914 40 H 0.088 0.912 41 H 0.087 0.913 42 H 0.087 0.913 43 H 0.086 0.914 44 H 0.088 0.912 45 H 0.086 0.914 46 H 0.087 0.913 47 H 0.144 0.856 48 H 0.157 0.843 49 H 0.247 0.753 50 H 0.150 0.850 51 H 0.226 0.774 52 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 3.857 1.297 -0.446 4.094 hybrid contribution 0.705 0.239 0.321 0.811 sum 4.563 1.536 -0.124 4.816 Atomic orbital electron populations 1.20416 0.88738 1.03340 1.02643 1.20075 0.96149 0.90418 1.00347 1.20001 0.83448 0.93009 1.20364 1.17081 0.85767 0.82898 0.76187 1.90842 1.15735 1.82691 1.48305 1.43333 1.10029 1.04762 1.74013 1.17649 0.96705 0.82769 0.98786 1.20869 1.01121 0.93767 1.00409 1.20820 0.96323 0.95054 0.99809 1.19992 0.94910 0.95961 0.97790 1.20244 1.00913 0.90790 0.98839 1.26210 1.05315 1.16854 1.00652 0.79256 0.67085 0.66366 0.66984 1.26159 1.06057 1.06817 1.16750 1.26138 1.06696 1.08969 1.14057 1.26158 1.20855 1.04372 1.04440 1.20986 0.99759 0.92338 0.98886 1.21283 0.96392 0.96360 0.99328 1.42017 1.07081 1.06606 1.58587 1.20964 0.98109 0.82370 1.08427 1.24458 1.00377 0.98475 0.92974 1.86578 1.96767 1.34824 1.15137 0.86099 0.78609 0.79510 0.81680 1.17062 1.15552 1.16909 1.20658 0.90331 0.99211 1.09152 0.91078 0.91472 0.90021 0.76346 0.85957 0.85635 0.90765 0.90834 0.90600 0.90533 0.91352 0.91372 0.91233 0.91323 0.91327 0.91361 0.91208 0.91378 0.91303 0.85609 0.84287 0.75283 0.85001 0.77395 0.83175 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.17 9.83 36.01 0.35 0.18 16 2 C -0.06 -0.14 6.21 -104.15 -0.65 -0.78 16 3 C -0.06 -0.10 7.05 -81.99 -0.58 -0.68 16 4 C 0.59 1.68 7.63 -12.87 -0.10 1.58 16 5 O -0.50 -2.81 12.24 5.19 0.06 -2.75 16 6 N -0.68 -0.48 5.33 -11.05 -0.06 -0.53 16 7 C 0.13 0.29 6.30 -83.72 -0.53 -0.24 16 8 C -0.14 -0.11 9.97 -39.38 -0.39 -0.51 16 9 C -0.10 -0.07 9.69 -39.61 -0.38 -0.46 16 10 C -0.09 -0.09 5.14 -104.58 -0.54 -0.63 16 11 C -0.07 0.06 4.71 -27.88 -0.13 -0.07 16 12 C -0.41 0.67 4.43 37.16 0.16 0.83 16 13 Si 1.01 -2.77 12.19 -169.99 -2.07 -4.85 16 14 C -0.45 0.74 8.65 101.05 0.87 1.62 16 15 C -0.45 0.59 8.65 101.05 0.87 1.46 16 16 C -0.45 0.66 8.65 101.05 0.87 1.53 16 17 C -0.10 -0.20 9.69 -39.61 -0.38 -0.58 16 18 C -0.11 -0.36 8.69 -39.39 -0.34 -0.70 16 19 N -0.54 0.45 5.47 -5.70 -0.03 0.42 16 20 C 0.02 -0.01 6.12 -81.95 -0.50 -0.51 16 21 C -0.05 0.11 2.98 36.00 0.11 0.22 16 22 O -0.53 0.67 12.87 -35.23 -0.45 0.22 16 23 Si 0.92 -2.73 26.24 -169.99 -4.46 -7.19 16 24 H -0.25 0.75 7.11 56.52 0.40 1.15 16 25 H -0.23 0.31 7.11 56.52 0.40 0.72 16 26 H -0.25 0.67 7.11 56.52 0.40 1.07 16 27 C -0.17 -0.16 10.64 -39.98 -0.43 -0.58 16 28 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 29 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 30 H 0.08 0.27 6.49 -51.93 -0.34 -0.06 16 31 H 0.40 -0.98 7.96 -40.82 -0.32 -1.31 16 32 H 0.12 -0.17 8.06 -52.48 -0.42 -0.59 16 33 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 34 H 0.07 -0.11 7.73 -51.93 -0.40 -0.51 16 35 H 0.07 -0.13 7.73 -51.93 -0.40 -0.53 16 36 H 0.08 -0.11 7.96 -51.93 -0.41 -0.53 16 37 H 0.08 -0.09 7.96 -51.93 -0.41 -0.51 16 38 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 39 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 40 H 0.07 -0.11 7.79 -51.93 -0.40 -0.52 16 41 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 42 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 43 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 44 H 0.07 -0.10 7.79 -51.93 -0.40 -0.50 16 45 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 46 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 47 H 0.13 0.07 8.06 -52.48 -0.42 -0.35 16 48 H 0.14 0.58 6.23 -52.49 -0.33 0.25 16 49 H 0.41 -1.36 5.99 -40.82 -0.24 -1.60 16 50 H 0.13 -0.41 7.96 -51.93 -0.41 -0.83 16 51 H 0.38 -1.62 8.70 45.56 0.40 -1.22 16 52 H 0.15 0.01 8.06 -52.49 -0.42 -0.42 16 LS Contribution 425.26 15.07 6.41 6.41 Total: 0.00 -7.42 425.26 -10.22 -17.64 By element: Atomic # 1 Polarization: -3.12 SS G_CDS: -7.92 Total: -11.04 kcal Atomic # 6 Polarization: 3.38 SS G_CDS: -1.70 Total: 1.68 kcal Atomic # 7 Polarization: -0.03 SS G_CDS: -0.09 Total: -0.12 kcal Atomic # 8 Polarization: -2.14 SS G_CDS: -0.39 Total: -2.53 kcal Atomic # 14 Polarization: -5.51 SS G_CDS: -6.53 Total: -12.04 kcal Total LS contribution 6.41 Total: 6.41 kcal Total: -7.42 -10.22 -17.64 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11757974_13940406.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.243 kcal (2) G-P(sol) polarization free energy of solvation -7.416 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.659 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.221 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.637 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.880 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds