Wall clock time and date at job start Tue Mar 9 2021 14:21:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37866 * 126.45687 * 2 1 4 4 C 1.46679 * 126.23391 * 359.97438 * 3 2 1 5 5 O 1.21690 * 120.00206 * 359.97438 * 4 3 2 6 6 N 1.34777 * 119.99839 * 179.97438 * 4 3 2 7 7 C 1.46501 * 119.99775 * 179.97438 * 6 4 3 8 8 C 1.53003 * 109.46805 * 179.97438 * 7 6 4 9 9 C 1.47207 * 109.46754 * 180.02562 * 8 7 6 10 10 C 8.44136 * 98.85216 * 359.97438 * 2 1 3 11 11 Si 9.04627 * 114.94403 * 179.97438 * 3 1 2 12 12 C 1.86300 * 109.46953 * 145.57427 * 11 10 9 13 13 C 1.86296 * 109.47138 * 265.57385 * 11 10 9 14 14 C 1.86298 * 109.47155 * 25.57686 * 11 10 9 15 15 N 1.37652 * 107.53485 * 179.75698 * 3 2 1 16 16 C 1.35533 * 108.64017 * 0.36528 * 15 3 2 17 17 C 1.50706 * 125.56571 * 179.89438 * 16 15 3 18 18 O 1.42895 * 109.47147 * 119.69119 * 17 16 15 19 19 Si 1.86299 * 109.46748 * 359.69477 * 17 16 15 20 20 H 1.48492 * 109.47301 * 60.00030 * 19 17 16 21 21 H 1.48506 * 109.47139 * 180.02562 * 19 17 16 22 22 H 1.48503 * 109.47188 * 299.99930 * 19 17 16 23 23 C 1.35457 * 108.87475 * 359.63143 * 16 15 3 24 24 H 1.09001 * 109.47048 * 269.99995 * 1 2 3 25 25 H 1.09004 * 109.47038 * 29.99771 * 1 2 3 26 26 H 1.08998 * 109.47031 * 149.99564 * 1 2 3 27 27 H 0.97005 * 120.00354 * 359.97438 * 6 4 3 28 28 H 1.08999 * 109.47422 * 300.00058 * 7 6 4 29 29 H 1.09003 * 109.46873 * 60.00289 * 7 6 4 30 30 H 1.08993 * 109.47261 * 299.99843 * 8 7 6 31 31 H 1.08995 * 109.47162 * 60.00282 * 8 7 6 32 32 H 1.09000 * 109.47146 * 59.99763 * 12 11 10 33 33 H 1.08994 * 109.47381 * 179.97438 * 12 11 10 34 34 H 1.09000 * 109.47713 * 300.00212 * 12 11 10 35 35 H 1.09001 * 109.47049 * 60.00631 * 13 11 10 36 36 H 1.09002 * 109.46769 * 179.97438 * 13 11 10 37 37 H 1.08995 * 109.47351 * 300.00062 * 13 11 10 38 38 H 1.09007 * 109.47275 * 59.99655 * 14 11 10 39 39 H 1.09002 * 109.47418 * 179.97438 * 14 11 10 40 40 H 1.08998 * 109.47160 * 300.00059 * 14 11 10 41 41 H 0.96996 * 125.68386 * 180.24363 * 15 3 2 42 42 H 1.09001 * 109.46740 * 239.69518 * 17 16 15 43 43 H 0.96695 * 114.00385 * 300.00674 * 18 17 16 44 44 H 1.07997 * 126.06677 * 180.26402 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8898 2.5092 -0.0005 5 8 0.7027 2.7766 -0.0015 6 7 2.8037 3.4999 0.0001 7 6 2.3678 4.8985 -0.0010 8 6 3.5933 5.8146 0.0006 9 6 3.1553 7.2200 0.0001 10 6 2.8060 8.3408 -0.0037 11 14 2.2407 10.1547 -0.0037 12 6 0.6727 10.3165 -0.9966 13 6 1.9265 10.7072 1.7475 14 6 3.5685 11.2190 -0.7619 15 7 3.6284 0.6625 0.0056 16 6 3.6217 -0.6928 0.0008 17 6 4.8433 -1.5754 0.0021 18 8 4.8344 -2.3993 1.1695 19 14 6.3753 -0.5152 0.0021 20 1 6.3833 0.3431 1.2138 21 1 7.5791 -1.3848 0.0027 22 1 6.3846 0.3412 -1.2112 23 6 2.3379 -1.1247 0.0005 24 1 -0.3633 0.0000 1.0277 25 1 -0.3633 0.8900 -0.5138 26 1 -0.3633 -0.8899 -0.5139 27 1 3.7501 3.2868 0.0012 28 1 1.7701 5.0922 -0.8917 29 1 1.7682 5.0929 0.8883 30 1 4.1906 5.6209 0.8915 31 1 4.1933 5.6203 -0.8884 32 1 -0.1042 9.6937 -0.5531 33 1 0.3481 11.3570 -0.9963 34 1 0.8564 9.9932 -2.0213 35 1 2.8440 10.6126 2.3285 36 1 1.6026 11.7480 1.7475 37 1 1.1497 10.0845 2.1912 38 1 3.7523 10.8957 -1.7866 39 1 3.2440 12.2596 -0.7623 40 1 4.4859 11.1244 -0.1810 41 1 4.4191 1.2243 0.0102 42 1 4.8374 -2.2053 -0.8874 43 1 4.8389 -1.9045 2.0003 44 1 2.0136 -2.1549 0.0012 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11968232_13940406.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:21:14 Heat of formation + Delta-G solvation = -36.880509 kcal Electronic energy + Delta-G solvation = -21895.639407 eV Core-core repulsion = 18551.752704 eV Total energy + Delta-G solvation = -3343.886703 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 308.147 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -42.62014 -40.25711 -37.84268 -36.98999 -34.51521 -33.54404 -31.70196 -30.32391 -29.60542 -28.47237 -28.45642 -28.30090 -26.96471 -24.57401 -22.44321 -21.62262 -20.45711 -19.89460 -18.24560 -17.85499 -16.97144 -16.93664 -16.78384 -16.54208 -15.65932 -15.56819 -15.11566 -14.69866 -14.55340 -14.48840 -14.27880 -14.06330 -14.03637 -13.87884 -13.58095 -13.48733 -13.37726 -13.37068 -13.34448 -13.14559 -13.10107 -12.97179 -12.62360 -12.47420 -12.18959 -12.13099 -11.55389 -11.46618 -11.00174 -10.68062 -10.66103 -10.63985 -10.29027 -9.78960 -9.15660 0.32332 0.80849 1.09226 1.12805 1.33815 1.40257 1.59025 1.60956 1.62749 1.87135 1.98929 2.35503 2.35808 2.36949 2.39629 3.23985 3.55794 3.66770 3.89506 3.96737 4.01576 4.19308 4.30763 4.34579 4.38397 4.65708 4.66138 4.69983 4.70595 4.71917 4.73598 4.75407 4.78383 4.81532 4.94464 5.04395 5.16463 5.24698 5.39737 5.47703 5.48848 5.50825 5.67197 5.92811 6.15224 6.35280 6.36264 6.74156 7.09732 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.066 4.066 3 C -0.054 4.054 4 C 0.591 3.409 5 O -0.517 6.517 6 N -0.737 5.737 7 C 0.126 3.874 8 C -0.031 4.031 9 C -0.182 4.182 10 C -0.407 4.407 11 Si 1.142 2.858 12 C -0.453 4.453 13 C -0.453 4.453 14 C -0.452 4.452 15 N -0.542 5.542 16 C 0.013 3.987 17 C -0.050 4.050 18 O -0.529 6.529 19 Si 0.922 3.078 20 H -0.248 1.248 21 H -0.234 1.234 22 H -0.246 1.246 23 C -0.169 4.169 24 H 0.069 0.931 25 H 0.081 0.919 26 H 0.065 0.935 27 H 0.393 0.607 28 H 0.077 0.923 29 H 0.077 0.923 30 H 0.091 0.909 31 H 0.091 0.909 32 H 0.072 0.928 33 H 0.076 0.924 34 H 0.071 0.929 35 H 0.071 0.929 36 H 0.076 0.924 37 H 0.072 0.928 38 H 0.071 0.929 39 H 0.077 0.923 40 H 0.071 0.929 41 H 0.408 0.592 42 H 0.132 0.868 43 H 0.378 0.622 44 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.137 2.035 0.082 4.611 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.075 4.075 3 C -0.166 4.166 4 C 0.379 3.621 5 O -0.393 6.393 6 N -0.389 5.389 7 C 0.003 3.997 8 C -0.067 4.067 9 C -0.183 4.183 10 C -0.442 4.442 11 Si 1.327 2.673 12 C -0.561 4.561 13 C -0.560 4.560 14 C -0.560 4.560 15 N -0.143 5.143 16 C -0.103 4.103 17 C -0.162 4.162 18 O -0.334 6.334 19 Si 0.743 3.257 20 H -0.171 1.171 21 H -0.157 1.157 22 H -0.170 1.170 23 C -0.193 4.193 24 H 0.088 0.912 25 H 0.099 0.901 26 H 0.084 0.916 27 H 0.227 0.773 28 H 0.095 0.905 29 H 0.095 0.905 30 H 0.109 0.891 31 H 0.109 0.891 32 H 0.091 0.909 33 H 0.095 0.905 34 H 0.090 0.910 35 H 0.090 0.910 36 H 0.096 0.904 37 H 0.091 0.909 38 H 0.090 0.910 39 H 0.096 0.904 40 H 0.090 0.910 41 H 0.247 0.753 42 H 0.149 0.851 43 H 0.226 0.774 44 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 4.153 2.290 -0.359 4.756 hybrid contribution 0.748 -0.006 0.373 0.836 sum 4.902 2.284 0.014 5.408 Atomic orbital electron populations 1.20398 0.88840 1.03240 1.02559 1.20061 0.96119 0.90505 1.00797 1.20136 0.83303 0.93397 1.19751 1.17000 0.85792 0.82891 0.76409 1.90854 1.15814 1.83102 1.49499 1.45871 1.09354 1.06517 1.77158 1.21290 0.96200 0.78474 1.03756 1.18899 0.97383 0.86603 1.03861 1.23363 1.00076 0.94838 0.99977 1.35985 1.00378 1.06804 1.00993 0.76986 0.66213 0.56837 0.67216 1.26122 1.15698 1.04975 1.09273 1.26122 1.05310 1.06129 1.18484 1.26120 1.12772 1.09689 1.07421 1.42006 1.07116 1.06541 1.58595 1.20932 0.98044 0.82429 1.08864 1.24452 1.00419 0.98510 0.92864 1.86573 1.96771 1.34893 1.15119 0.86081 0.78563 0.79478 0.81616 1.17111 1.15653 1.16952 1.20645 0.90373 0.99168 1.09144 0.91197 0.90054 0.91581 0.77343 0.90475 0.90486 0.89073 0.89057 0.90884 0.90459 0.90954 0.91004 0.90449 0.90911 0.90973 0.90442 0.91000 0.75337 0.85078 0.77422 0.83291 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.22 9.83 36.01 0.35 0.13 16 2 C -0.07 -0.18 6.21 -104.16 -0.65 -0.82 16 3 C -0.05 -0.11 7.06 -81.98 -0.58 -0.69 16 4 C 0.59 1.76 7.79 -12.85 -0.10 1.66 16 5 O -0.52 -3.30 14.80 5.20 0.08 -3.23 16 6 N -0.74 0.11 5.55 -61.62 -0.34 -0.24 16 7 C 0.13 0.05 5.63 -4.04 -0.02 0.03 16 8 C -0.03 0.03 5.82 -29.51 -0.17 -0.14 16 9 C -0.18 -0.33 13.34 -37.12 -0.50 -0.82 16 10 C -0.41 -0.49 12.14 29.55 0.36 -0.13 16 11 Si 1.14 -2.87 14.26 -169.99 -2.42 -5.29 16 12 C -0.45 0.77 8.65 101.05 0.87 1.64 16 13 C -0.45 0.84 8.65 101.05 0.87 1.72 16 14 C -0.45 0.92 8.65 101.05 0.87 1.79 16 15 N -0.54 0.34 5.47 -5.69 -0.03 0.31 16 16 C 0.01 0.00 6.12 -81.95 -0.50 -0.50 16 17 C -0.05 0.10 2.98 36.01 0.11 0.21 16 18 O -0.53 0.58 12.87 -35.23 -0.45 0.12 16 19 Si 0.92 -2.66 26.24 -169.99 -4.46 -7.12 16 20 H -0.25 0.74 7.11 56.52 0.40 1.14 16 21 H -0.23 0.29 7.11 56.52 0.40 0.69 16 22 H -0.25 0.65 7.11 56.52 0.40 1.05 16 23 C -0.17 -0.22 10.64 -39.98 -0.43 -0.65 16 24 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 25 H 0.08 0.32 6.48 -51.93 -0.34 -0.02 16 26 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 27 H 0.39 -1.26 7.60 -40.82 -0.31 -1.57 16 28 H 0.08 0.12 8.14 -51.93 -0.42 -0.30 16 29 H 0.08 0.12 8.14 -51.93 -0.42 -0.31 16 30 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 31 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 32 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 33 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 34 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 35 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 36 H 0.08 -0.19 7.96 -51.93 -0.41 -0.61 16 37 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 38 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 39 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 40 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 41 H 0.41 -1.33 5.98 -40.82 -0.24 -1.57 16 42 H 0.13 -0.38 7.96 -51.93 -0.41 -0.79 16 43 H 0.38 -1.56 8.70 45.56 0.40 -1.16 16 44 H 0.15 0.06 8.06 -52.49 -0.42 -0.36 16 LS Contribution 379.33 15.07 5.72 5.72 Total: 0.00 -8.56 379.33 -7.80 -16.36 By element: Atomic # 1 Polarization: -3.67 SS G_CDS: -6.38 Total: -10.06 kcal Atomic # 6 Polarization: 2.92 SS G_CDS: 0.50 Total: 3.42 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -0.37 Total: 0.08 kcal Atomic # 8 Polarization: -2.73 SS G_CDS: -0.38 Total: -3.10 kcal Atomic # 14 Polarization: -5.53 SS G_CDS: -6.88 Total: -12.41 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -8.56 -7.80 -16.36 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11968232_13940406.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.521 kcal (2) G-P(sol) polarization free energy of solvation -8.558 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.079 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.801 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.359 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.881 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds