Wall clock time and date at job start Tue Mar 9 2021 14:27:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86294 * 1 3 3 C 1.86301 * 109.47418 * 2 1 4 4 C 1.86302 * 109.47243 * 239.99803 * 2 1 3 5 5 C 1.90004 * 109.47093 * 120.00013 * 2 1 3 6 6 C 3.07400 * 109.47178 * 120.00119 * 2 1 3 7 7 C 4.54598 * 109.47100 * 120.00032 * 2 1 3 8 8 C 1.53005 * 109.47003 * 227.62502 * 7 6 5 9 9 N 1.46501 * 109.46985 * 180.02562 * 8 7 6 10 10 C 1.34774 * 120.00005 * 179.97438 * 9 8 7 11 11 O 1.21287 * 119.99778 * 0.02562 * 10 9 8 12 12 C 1.50704 * 120.00211 * 180.02562 * 10 9 8 13 13 O 1.42900 * 109.46992 * 180.02562 * 12 10 9 14 14 C 1.35914 * 116.99871 * 180.02562 * 13 12 10 15 15 C 1.38678 * 120.06015 * 359.97438 * 14 13 12 16 16 C 1.38181 * 119.95680 * 179.97438 * 15 14 13 17 17 C 1.38241 * 120.07059 * 0.03195 * 16 15 14 18 18 C 1.50706 * 119.93825 * 179.97438 * 17 16 15 19 19 O 1.42895 * 109.46938 * 299.99525 * 18 17 16 20 20 Si 1.86299 * 109.46748 * 179.97438 * 18 17 16 21 21 H 1.48505 * 109.47505 * 299.99883 * 20 18 17 22 22 H 1.48503 * 109.47188 * 60.00070 * 20 18 17 23 23 H 1.48506 * 109.47139 * 179.97438 * 20 18 17 24 24 C 1.38279 * 120.12009 * 0.24319 * 17 16 15 25 25 C 1.38197 * 120.04539 * 359.46139 * 24 17 16 26 26 Br 1.89099 * 120.04178 * 180.25362 * 25 24 17 27 27 H 1.08998 * 109.47276 * 299.99807 * 1 2 3 28 28 H 1.08998 * 109.47373 * 59.99903 * 1 2 3 29 29 H 1.08999 * 109.47438 * 179.97438 * 1 2 3 30 30 H 1.09002 * 109.47388 * 179.97438 * 3 2 1 31 31 H 1.08998 * 109.46927 * 300.00370 * 3 2 1 32 32 H 1.08998 * 109.46739 * 59.99864 * 3 2 1 33 33 H 1.08999 * 109.47144 * 300.00474 * 4 2 1 34 34 H 1.09009 * 109.46926 * 60.00283 * 4 2 1 35 35 H 1.08998 * 109.47398 * 179.97438 * 4 2 1 36 36 H 1.09002 * 109.47359 * 107.62524 * 7 6 5 37 37 H 1.08998 * 109.47416 * 347.62822 * 7 6 5 38 38 H 1.08994 * 109.46953 * 60.00486 * 8 7 6 39 39 H 1.09001 * 109.46746 * 299.99889 * 8 7 6 40 40 H 0.97000 * 120.00017 * 0.02562 * 9 8 7 41 41 H 1.08994 * 109.46996 * 60.00301 * 12 10 9 42 42 H 1.09001 * 109.46965 * 299.99543 * 12 10 9 43 43 H 1.07999 * 120.02210 * 359.96235 * 15 14 13 44 44 H 1.07999 * 119.96701 * 180.02562 * 16 15 14 45 45 H 1.09000 * 109.47161 * 59.99791 * 18 17 16 46 46 H 0.96709 * 113.99981 * 180.02562 * 19 18 17 47 47 H 1.07998 * 119.98018 * 179.72434 * 24 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8629 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4840 -0.8783 -1.5211 5 6 2.4963 -0.8957 1.5514 6 6 2.8876 -1.4491 2.5099 7 6 3.3783 -2.1430 3.7118 8 6 3.8397 -1.1116 4.7434 9 7 4.3286 -1.8022 5.9394 10 6 4.7896 -1.0909 6.9872 11 8 4.7993 0.1210 6.9401 12 6 5.2931 -1.8013 8.2172 13 8 5.7239 -0.8379 9.1808 14 6 6.2105 -1.3161 10.3563 15 6 6.2714 -2.6837 10.5780 16 6 6.7669 -3.1675 11.7737 17 6 7.2013 -2.2897 12.7493 18 6 7.7407 -2.8206 14.0526 19 8 6.7316 -3.5928 14.7064 20 14 8.2385 -1.3959 15.1449 21 1 9.2873 -0.5938 14.4652 22 1 7.0551 -0.5392 15.4112 23 1 8.7694 -1.9190 16.4294 24 6 7.1367 -0.9253 12.5338 25 6 6.6477 -0.4362 11.3373 26 35 6.5660 1.4294 11.0399 27 1 -0.3634 0.5138 0.8900 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3634 -1.0276 -0.0005 30 1 3.5741 1.7564 0.0005 31 1 2.1207 2.2703 -0.8899 32 1 2.1207 2.2702 0.8900 33 1 2.1206 -1.9059 -1.5211 34 1 2.1207 -0.3644 -2.4112 35 1 3.5740 -0.8779 -1.5214 36 1 4.2151 -2.7876 3.4430 37 1 2.5760 -2.7470 4.1356 38 1 3.0029 -0.4671 5.0122 39 1 4.6421 -0.5077 4.3195 40 1 4.3211 -2.7715 5.9769 41 1 6.1299 -2.4455 7.9478 42 1 4.4912 -2.4054 8.6416 43 1 5.9316 -3.3702 9.8166 44 1 6.8148 -4.2325 11.9464 45 1 8.6095 -3.4491 13.8571 46 1 7.0096 -3.9663 15.5540 47 1 7.4725 -0.2415 13.2993 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11968232_6201210.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:27:33 Heat of formation + Delta-G solvation = -74.722148 kcal Electronic energy + Delta-G solvation = -26298.993222 eV Core-core repulsion = 22232.165158 eV Total energy + Delta-G solvation = -4066.828064 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 413.062 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -41.67050 -40.61902 -39.09171 -37.40249 -36.89465 -34.39739 -33.47593 -32.30461 -31.21714 -30.23715 -29.62324 -29.12265 -28.45819 -28.44140 -26.40034 -24.77792 -23.78665 -22.29583 -21.78529 -19.60087 -18.83023 -18.51863 -17.99753 -17.64960 -17.09756 -17.03413 -16.67583 -16.53667 -16.26144 -15.56314 -15.21839 -15.09401 -14.69106 -14.59025 -14.50697 -14.26180 -14.09467 -14.04883 -14.02296 -13.94675 -13.77573 -13.56403 -13.35950 -13.32672 -13.13097 -13.09921 -12.52148 -12.34727 -12.22513 -12.11651 -12.06948 -11.84006 -11.71453 -11.53872 -11.44977 -11.03033 -10.96826 -10.65543 -10.62616 -10.44921 -10.27427 -9.96738 -9.26290 -0.02131 0.07589 0.73436 1.07047 1.21212 1.37304 1.41623 1.44986 1.45634 1.46657 1.65539 1.86260 2.28960 2.36490 2.37410 2.38508 2.50408 3.24935 3.36577 3.59404 3.67983 3.71892 3.80402 3.85674 3.89963 3.98925 4.02641 4.03892 4.25589 4.31427 4.36598 4.57446 4.67133 4.67741 4.71396 4.71933 4.73517 4.75066 4.76663 4.77035 4.82027 4.99684 5.16946 5.27706 5.40058 5.41208 5.50204 5.52429 5.99284 6.25501 6.48504 6.75808 7.03916 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.452 4.452 2 Si 1.140 2.860 3 C -0.453 4.453 4 C -0.452 4.452 5 C -0.407 4.407 6 C -0.182 4.182 7 C -0.029 4.029 8 C 0.126 3.874 9 N -0.730 5.730 10 C 0.516 3.484 11 O -0.504 6.504 12 C 0.038 3.962 13 O -0.274 6.274 14 C 0.160 3.840 15 C -0.204 4.204 16 C -0.031 4.031 17 C -0.107 4.107 18 C -0.074 4.074 19 O -0.545 6.545 20 Si 0.930 3.070 21 H -0.245 1.245 22 H -0.243 1.243 23 H -0.252 1.252 24 C -0.056 4.056 25 C -0.118 4.118 26 Br -0.024 7.024 27 H 0.072 0.928 28 H 0.076 0.924 29 H 0.071 0.929 30 H 0.071 0.929 31 H 0.076 0.924 32 H 0.072 0.928 33 H 0.071 0.929 34 H 0.076 0.924 35 H 0.071 0.929 36 H 0.093 0.907 37 H 0.093 0.907 38 H 0.076 0.924 39 H 0.076 0.924 40 H 0.403 0.597 41 H 0.098 0.902 42 H 0.098 0.902 43 H 0.140 0.860 44 H 0.139 0.861 45 H 0.080 0.920 46 H 0.382 0.618 47 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.395 -6.961 -1.530 7.139 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.560 4.560 2 Si 1.326 2.674 3 C -0.561 4.561 4 C -0.560 4.560 5 C -0.442 4.442 6 C -0.183 4.183 7 C -0.066 4.066 8 C 0.003 3.997 9 N -0.385 5.385 10 C 0.300 3.700 11 O -0.377 6.377 12 C -0.040 4.040 13 O -0.185 6.185 14 C 0.112 3.888 15 C -0.224 4.224 16 C -0.049 4.049 17 C -0.108 4.108 18 C -0.184 4.184 19 O -0.351 6.351 20 Si 0.752 3.248 21 H -0.169 1.169 22 H -0.166 1.166 23 H -0.176 1.176 24 C -0.076 4.076 25 C -0.198 4.198 26 Br 0.061 6.939 27 H 0.091 0.909 28 H 0.095 0.905 29 H 0.090 0.910 30 H 0.091 0.909 31 H 0.095 0.905 32 H 0.091 0.909 33 H 0.090 0.910 34 H 0.095 0.905 35 H 0.090 0.910 36 H 0.111 0.889 37 H 0.111 0.889 38 H 0.094 0.906 39 H 0.094 0.906 40 H 0.238 0.762 41 H 0.116 0.884 42 H 0.116 0.884 43 H 0.158 0.842 44 H 0.156 0.844 45 H 0.098 0.902 46 H 0.230 0.770 47 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.292 -4.314 -1.642 4.625 hybrid contribution 0.290 -1.919 0.541 2.015 sum 0.582 -6.233 -1.100 6.356 Atomic orbital electron populations 1.26118 1.20114 1.04867 1.04919 0.77009 0.65972 0.64751 0.59664 1.26124 1.06692 1.18343 1.04928 1.26116 1.06653 1.08369 1.14839 1.35967 1.01724 1.01329 1.05196 1.23383 0.99337 0.99273 0.96285 1.18888 1.01493 0.96670 0.89558 1.21293 1.00208 0.94671 0.83526 1.45750 1.65975 1.10477 1.16253 1.19949 0.78316 0.88054 0.83718 1.90823 1.52640 1.13437 1.80839 1.22533 1.01403 0.91612 0.88501 1.86276 1.76070 1.33403 1.22800 1.18605 0.93075 0.91688 0.85420 1.21273 1.07602 0.93066 1.00422 1.20907 0.92708 1.00403 0.90912 1.19142 1.03775 0.92230 0.95655 1.24576 0.93932 1.03817 0.96107 1.86493 1.39249 1.70691 1.38640 0.85958 0.81259 0.78371 0.79198 1.16887 1.16616 1.17553 1.20804 0.96601 0.95102 0.95055 1.20914 1.10805 0.91683 0.96370 1.96803 1.97749 1.02561 1.96770 0.90928 0.90456 0.90980 0.90935 0.90460 0.90900 0.90977 0.90452 0.90953 0.88917 0.88911 0.90578 0.90586 0.76227 0.88381 0.88378 0.84201 0.84360 0.90201 0.77032 0.84632 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.84 8.65 101.05 0.87 1.71 16 2 Si 1.14 -2.77 14.26 -169.99 -2.42 -5.20 16 3 C -0.45 0.69 8.65 101.05 0.87 1.57 16 4 C -0.45 0.90 8.65 101.05 0.87 1.77 16 5 C -0.41 -0.48 12.14 29.55 0.36 -0.12 16 6 C -0.18 -0.30 13.34 -37.12 -0.50 -0.79 16 7 C -0.03 0.04 5.82 -29.52 -0.17 -0.13 16 8 C 0.13 -0.02 5.63 -4.04 -0.02 -0.04 16 9 N -0.73 1.22 5.56 -60.29 -0.33 0.89 16 10 C 0.52 0.78 7.91 -10.98 -0.09 0.70 16 11 O -0.50 -3.47 16.50 -14.36 -0.24 -3.71 16 12 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 13 O -0.27 -0.84 9.01 -39.38 -0.35 -1.20 16 14 C 0.16 0.37 6.68 -39.20 -0.26 0.11 16 15 C -0.20 0.06 9.04 -39.44 -0.36 -0.29 16 16 C -0.03 0.00 9.60 -39.60 -0.38 -0.38 16 17 C -0.11 -0.10 5.42 -104.60 -0.57 -0.66 16 18 C -0.07 0.08 2.81 36.01 0.10 0.18 16 19 O -0.54 0.42 12.74 -35.23 -0.45 -0.03 16 20 Si 0.93 -0.56 25.07 -169.99 -4.26 -4.82 16 21 H -0.25 -0.02 7.11 56.52 0.40 0.39 16 22 H -0.24 -0.26 7.11 56.52 0.40 0.14 16 23 H -0.25 0.18 7.11 56.52 0.40 0.58 16 24 C -0.06 -0.12 8.40 -39.58 -0.33 -0.45 16 25 C -0.12 -0.39 6.24 -39.37 -0.25 -0.64 16 26 Br -0.02 -0.11 33.16 -68.01 -2.26 -2.36 16 27 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 28 H 0.08 -0.19 7.96 -51.93 -0.41 -0.61 16 29 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 30 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 31 H 0.08 -0.17 7.96 -51.93 -0.41 -0.59 16 32 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 33 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 34 H 0.08 -0.20 7.96 -51.92 -0.41 -0.61 16 35 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 36 H 0.09 -0.27 8.14 -51.93 -0.42 -0.70 16 37 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 38 H 0.08 0.10 8.14 -51.93 -0.42 -0.33 16 39 H 0.08 0.10 8.14 -51.93 -0.42 -0.33 16 40 H 0.40 -2.19 8.47 -40.82 -0.35 -2.54 16 41 H 0.10 -0.40 7.66 -51.93 -0.40 -0.79 16 42 H 0.10 -0.38 7.66 -51.93 -0.40 -0.78 16 43 H 0.14 -0.50 6.30 -52.49 -0.33 -0.83 16 44 H 0.14 -0.27 8.06 -52.49 -0.42 -0.70 16 45 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 46 H 0.38 -1.93 8.74 45.56 0.40 -1.53 16 47 H 0.14 0.17 4.87 -52.49 -0.26 -0.08 16 LS Contribution 425.79 15.07 6.42 6.42 Total: 0.00 -11.17 425.79 -9.92 -21.09 By element: Atomic # 1 Polarization: -7.38 SS G_CDS: -6.37 Total: -13.75 kcal Atomic # 6 Polarization: 2.32 SS G_CDS: 0.35 Total: 2.67 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -0.33 Total: 0.89 kcal Atomic # 8 Polarization: -3.90 SS G_CDS: -1.04 Total: -4.94 kcal Atomic # 14 Polarization: -3.33 SS G_CDS: -6.68 Total: -10.02 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -2.26 Total: -2.36 kcal Total LS contribution 6.42 Total: 6.42 kcal Total: -11.17 -9.92 -21.09 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11968232_6201210.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.630 kcal (2) G-P(sol) polarization free energy of solvation -11.169 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.799 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.923 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.092 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.722 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds