Wall clock time and date at job start Tue Mar 9 2021 12:56:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.35536 * 125.68183 * 2 1 4 4 C 1.35447 * 108.87027 * 180.02562 * 3 2 1 5 5 C 1.50703 * 126.06184 * 180.02562 * 4 3 2 6 6 O 1.42902 * 109.47108 * 119.97476 * 5 4 3 7 7 Si 1.86298 * 109.47450 * 359.97276 * 5 4 3 8 8 C 1.39828 * 107.86930 * 359.74105 * 4 3 2 9 9 C 1.37652 * 125.67596 * 180.02562 * 2 1 3 10 10 C 1.46678 * 126.23163 * 359.96605 * 9 2 1 11 11 O 1.21696 * 120.00255 * 5.14931 * 10 9 2 12 12 N 1.34780 * 119.99569 * 185.14491 * 10 9 2 13 13 C 1.46502 * 119.99671 * 176.67804 * 12 10 9 14 14 H 1.09006 * 112.84988 * 334.66315 * 13 12 10 15 15 C 1.53778 * 113.61539 * 105.86263 * 13 12 10 16 16 C 1.53960 * 87.01938 * 89.23208 * 15 13 12 17 17 H 1.09003 * 113.61003 * 270.79836 * 16 15 13 18 18 O 1.42893 * 113.66750 * 139.93471 * 16 15 13 19 19 C 1.35905 * 117.00167 * 103.96187 * 18 16 15 20 20 C 1.38727 * 120.05688 * 173.99626 * 19 18 16 21 21 C 1.38149 * 119.94401 * 179.69480 * 20 19 18 22 22 C 1.38266 * 120.05162 * 0.60166 * 21 20 19 23 23 C 1.38260 * 120.11172 * 359.67011 * 22 21 20 24 24 C 1.38149 * 120.05957 * 0.03057 * 23 22 21 25 25 C 1.53781 * 113.61350 * 203.47440 * 13 12 10 26 26 H 1.08995 * 109.46784 * 270.01717 * 1 2 3 27 27 H 1.09007 * 109.47007 * 30.01344 * 1 2 3 28 28 H 1.08999 * 109.47379 * 150.01416 * 1 2 3 29 29 H 1.07996 * 125.55772 * 0.02562 * 3 2 1 30 30 H 1.09004 * 109.46814 * 239.97440 * 5 4 3 31 31 H 0.96696 * 114.00023 * 179.97438 * 6 5 4 32 32 H 1.48495 * 110.00213 * 298.68361 * 7 5 4 33 33 H 1.48506 * 109.99773 * 60.00193 * 7 5 4 34 34 H 1.07996 * 126.46033 * 180.26227 * 8 4 3 35 35 H 0.96998 * 120.00610 * 356.67795 * 12 10 9 36 36 H 1.09003 * 113.61793 * 203.74650 * 15 13 12 37 37 H 1.08994 * 113.61407 * 334.65216 * 15 13 12 38 38 H 1.08001 * 120.02943 * 359.97438 * 20 19 18 39 39 H 1.07995 * 119.97096 * 180.27289 * 21 20 19 40 40 H 1.08004 * 119.94198 * 179.70059 * 22 21 20 41 41 H 1.08003 * 119.97005 * 180.02562 * 23 22 21 42 42 H 1.08000 * 120.02860 * 180.02562 * 24 23 22 43 43 H 1.08996 * 113.61716 * 25.34273 * 25 13 12 44 44 H 1.09005 * 113.61661 * 156.25154 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2556 1.1009 0.0000 4 6 3.5522 0.7092 -0.0006 5 6 4.7537 1.6188 -0.0002 6 8 5.5401 1.3688 1.1665 7 14 4.1888 3.3940 0.0003 8 6 3.5780 -0.6889 0.0051 9 6 2.2678 -1.1182 -0.0005 10 6 1.8123 -2.5124 -0.0004 11 8 0.6255 -2.7649 -0.0945 12 7 2.7082 -3.5140 0.1037 13 6 2.2486 -4.9031 0.1771 14 1 1.2367 -4.9939 0.5721 15 6 2.4771 -5.6969 -1.1200 16 6 3.8589 -6.0704 -0.5531 17 1 4.6427 -5.3572 -0.8081 18 8 4.2367 -7.4247 -0.8082 19 6 5.1555 -7.6350 -1.7872 20 6 5.6605 -8.9088 -2.0042 21 6 6.5898 -9.1211 -3.0041 22 6 7.0258 -8.0630 -3.7801 23 6 6.5282 -6.7916 -3.5622 24 6 5.5942 -6.5752 -2.5676 25 6 3.2580 -5.8514 0.8455 26 1 -0.3633 0.0003 1.0276 27 1 -0.3633 0.8899 -0.5141 28 1 -0.3634 -0.8901 -0.5136 29 1 1.9083 2.1235 0.0004 30 1 5.3536 1.4287 -0.8903 31 1 6.3319 1.9199 1.2326 32 1 3.3966 3.6754 -1.2238 33 1 3.3699 3.6661 1.2089 34 1 4.4583 -1.3145 0.0101 35 1 3.6572 -3.3151 0.1301 36 1 1.8072 -6.5492 -1.2341 37 1 2.5243 -5.0720 -2.0117 38 1 5.3241 -9.7346 -1.3948 39 1 6.9799 -10.1133 -3.1763 40 1 7.7560 -8.2302 -4.5582 41 1 6.8701 -5.9669 -4.1700 42 1 5.2055 -5.5819 -2.3980 43 1 3.9348 -5.3510 1.5380 44 1 2.8020 -6.7460 1.2697 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_10803934.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:07 Heat of formation + Delta-G solvation = 13.431620 kcal Electronic energy + Delta-G solvation = -27259.621604 eV Core-core repulsion = 23339.225088 eV Total energy + Delta-G solvation = -3920.396516 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.146 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.62829 -41.65554 -40.42466 -39.13653 -37.70265 -37.41475 -34.64978 -33.71903 -31.93055 -31.02452 -30.55801 -28.44924 -26.98174 -26.41406 -25.64299 -24.13876 -23.40867 -22.86238 -21.29091 -20.80145 -20.27618 -19.45485 -18.67080 -18.28791 -17.55129 -17.02976 -17.00065 -16.75282 -16.67896 -16.29402 -15.78472 -15.52084 -15.44403 -15.25800 -15.01179 -14.96873 -14.44805 -14.37537 -14.12159 -14.07179 -13.73563 -13.64722 -13.55058 -13.27739 -13.20350 -13.14234 -12.64934 -12.47994 -12.46027 -11.95902 -11.94550 -11.59480 -11.40727 -11.07995 -10.31808 -10.27319 -9.93545 -9.70615 -9.31267 -9.12363 -5.02327 0.36601 0.40633 0.51940 1.27376 1.41066 1.49452 1.66419 1.97790 2.16616 2.20560 2.28278 2.85647 3.21671 3.30247 3.47978 3.58307 3.62834 3.67616 3.77683 3.85467 3.91160 3.97305 4.04346 4.18834 4.22319 4.28174 4.31801 4.46431 4.51811 4.54327 4.57285 4.58211 4.62535 4.67216 4.71077 4.74263 4.80856 4.87837 5.07476 5.11841 5.33040 5.40372 5.48856 5.59079 5.62739 5.83983 5.84726 6.03336 6.32863 6.48607 6.69329 7.06915 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.403 5.403 3 C 0.021 3.979 4 C -0.162 4.162 5 C -0.033 4.033 6 O -0.548 6.548 7 Si 0.682 3.318 8 C -0.108 4.108 9 C -0.054 4.054 10 C 0.597 3.403 11 O -0.542 6.542 12 N -0.704 5.704 13 C 0.127 3.873 14 H 0.116 0.884 15 C -0.166 4.166 16 C 0.054 3.946 17 H 0.100 0.900 18 O -0.300 6.300 19 C 0.128 3.872 20 C -0.153 4.153 21 C -0.080 4.080 22 C -0.159 4.159 23 C -0.080 4.080 24 C -0.210 4.210 25 C -0.135 4.135 26 H 0.080 0.920 27 H 0.085 0.915 28 H 0.109 0.891 29 H 0.165 0.835 30 H 0.071 0.929 31 H 0.380 0.620 32 H -0.257 1.257 33 H -0.253 1.253 34 H 0.147 0.853 35 H 0.404 0.596 36 H 0.105 0.895 37 H 0.079 0.921 38 H 0.130 0.870 39 H 0.130 0.870 40 H 0.124 0.876 41 H 0.125 0.875 42 H 0.127 0.873 43 H 0.087 0.913 44 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.042 3.044 -0.822 5.126 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.074 5.074 3 C -0.116 4.116 4 C -0.168 4.168 5 C -0.145 4.145 6 O -0.353 6.353 7 Si 0.584 3.416 8 C -0.134 4.134 9 C -0.168 4.168 10 C 0.386 3.614 11 O -0.420 6.420 12 N -0.356 5.356 13 C 0.021 3.979 14 H 0.134 0.866 15 C -0.205 4.205 16 C -0.002 4.002 17 H 0.117 0.883 18 O -0.213 6.213 19 C 0.083 3.917 20 C -0.172 4.172 21 C -0.098 4.098 22 C -0.177 4.177 23 C -0.098 4.098 24 C -0.228 4.228 25 C -0.173 4.173 26 H 0.098 0.902 27 H 0.104 0.896 28 H 0.127 0.873 29 H 0.182 0.818 30 H 0.089 0.911 31 H 0.227 0.773 32 H -0.182 1.182 33 H -0.177 1.177 34 H 0.165 0.835 35 H 0.240 0.760 36 H 0.124 0.876 37 H 0.097 0.903 38 H 0.148 0.852 39 H 0.148 0.852 40 H 0.142 0.858 41 H 0.143 0.857 42 H 0.144 0.856 43 H 0.105 0.895 44 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 1.478 2.802 -0.638 3.231 hybrid contribution 0.412 -0.096 -0.264 0.498 sum 1.890 2.706 -0.901 3.422 Atomic orbital electron populations 1.22407 0.75362 1.05772 1.04415 1.43760 1.07070 1.04538 1.52068 1.21668 0.90271 0.91443 1.08174 1.18705 0.92077 0.93958 1.12070 1.23933 0.92761 1.07488 0.90329 1.86498 1.40407 1.65859 1.42564 0.95268 0.87127 0.78795 0.80434 1.21154 0.94270 0.94407 1.03554 1.19954 0.90256 0.87484 1.19066 1.16892 0.85472 0.83350 0.75688 1.90805 1.16209 1.84708 1.50286 1.45318 1.09907 1.05114 1.75221 1.21601 0.99938 0.79395 0.96942 0.86582 1.24065 0.97001 1.00849 0.98538 1.24267 0.96012 0.82560 0.97367 0.88276 1.86163 1.55494 1.28111 1.51563 1.19041 0.89564 0.94280 0.88780 1.20504 1.00316 0.95106 1.01284 1.21031 0.95486 0.99346 0.93963 1.21123 1.02209 0.92941 1.01433 1.20991 0.95251 0.97311 0.96268 1.21258 1.03051 0.98651 0.99870 1.23589 0.98000 1.00079 0.95589 0.90165 0.89644 0.87291 0.81792 0.91140 0.77300 1.18176 1.17750 0.83506 0.76027 0.87630 0.90253 0.85162 0.85242 0.85783 0.85741 0.85561 0.89491 0.86970 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.03 10.64 59.85 0.64 0.67 16 2 N -0.40 -1.06 3.16 -120.23 -0.38 -1.44 16 3 C 0.02 0.05 9.94 -16.91 -0.17 -0.12 16 4 C -0.16 -0.36 5.47 -105.02 -0.57 -0.93 16 5 C -0.03 0.01 3.01 36.01 0.11 0.12 16 6 O -0.55 0.02 12.86 -35.23 -0.45 -0.43 16 7 Si 0.68 -1.00 30.59 -169.99 -5.20 -6.20 16 8 C -0.11 -0.19 10.29 -39.12 -0.40 -0.60 16 9 C -0.05 -0.15 6.89 -81.98 -0.56 -0.72 16 10 C 0.60 1.70 7.78 -12.85 -0.10 1.60 16 11 O -0.54 -3.00 14.29 5.19 0.07 -2.93 16 12 N -0.70 0.13 5.25 -54.32 -0.29 -0.15 16 13 C 0.13 -0.06 4.27 -67.12 -0.29 -0.34 16 14 H 0.12 0.09 7.54 -51.93 -0.39 -0.30 16 15 C -0.17 0.05 7.73 -25.83 -0.20 -0.15 16 16 C 0.05 -0.03 3.51 -25.82 -0.09 -0.12 16 17 H 0.10 -0.17 6.07 -51.93 -0.32 -0.49 16 18 O -0.30 -0.59 10.15 -19.44 -0.20 -0.79 16 19 C 0.13 0.29 6.68 -39.22 -0.26 0.03 16 20 C -0.15 -0.29 9.99 -39.43 -0.39 -0.68 16 21 C -0.08 -0.07 10.04 -39.60 -0.40 -0.47 16 22 C -0.16 -0.13 10.04 -39.56 -0.40 -0.52 16 23 C -0.08 -0.07 10.04 -39.61 -0.40 -0.46 16 24 C -0.21 -0.26 9.01 -39.43 -0.36 -0.62 16 25 C -0.13 0.22 7.65 -25.92 -0.20 0.02 16 26 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 27 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 28 H 0.11 0.20 6.22 -51.93 -0.32 -0.13 16 29 H 0.17 0.10 6.19 -52.49 -0.32 -0.22 16 30 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 31 H 0.38 -1.92 8.74 45.56 0.40 -1.52 16 32 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 33 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 34 H 0.15 -0.08 7.45 -52.49 -0.39 -0.47 16 35 H 0.40 -0.95 7.60 -40.82 -0.31 -1.26 16 36 H 0.11 0.00 8.14 -51.93 -0.42 -0.43 16 37 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 38 H 0.13 0.11 8.06 -52.49 -0.42 -0.32 16 39 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 40 H 0.12 -0.12 8.06 -52.48 -0.42 -0.55 16 41 H 0.12 -0.14 8.06 -52.48 -0.42 -0.56 16 42 H 0.13 -0.05 5.96 -52.49 -0.31 -0.37 16 43 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 44 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 LS Contribution 368.29 15.07 5.55 5.55 Total: 0.00 -9.17 368.29 -10.74 -19.91 By element: Atomic # 1 Polarization: -4.42 SS G_CDS: -5.81 Total: -10.23 kcal Atomic # 6 Polarization: 0.75 SS G_CDS: -4.04 Total: -3.30 kcal Atomic # 7 Polarization: -0.92 SS G_CDS: -0.67 Total: -1.59 kcal Atomic # 8 Polarization: -3.57 SS G_CDS: -0.58 Total: -4.15 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.20 Total: -6.20 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -9.17 -10.74 -19.91 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_10803934.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.346 kcal (2) G-P(sol) polarization free energy of solvation -9.172 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.174 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.743 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.915 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.432 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds