Wall clock time and date at job start Tue Mar 9 2021 12:57:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42890 * 1 3 3 Si 1.86298 * 109.47100 * 2 1 4 4 C 1.50703 * 109.47419 * 120.00239 * 2 1 3 5 5 C 1.38396 * 119.82791 * 64.99985 * 4 2 1 6 6 C 1.37887 * 120.17094 * 180.02562 * 5 4 2 7 7 C 1.39843 * 119.82778 * 359.97438 * 6 5 4 8 8 C 1.47206 * 120.16892 * 179.97438 * 7 6 5 9 9 C 1.34812 * 119.99560 * 180.02562 * 8 7 6 10 10 C 1.46428 * 119.99590 * 179.97438 * 9 8 7 11 11 O 1.21698 * 120.00539 * 0.02562 * 10 9 8 12 12 N 1.34782 * 119.99595 * 179.97438 * 10 9 8 13 13 C 1.46504 * 119.99861 * 180.02562 * 12 10 9 14 14 H 1.09002 * 112.84933 * 336.19822 * 13 12 10 15 15 C 1.53777 * 113.61142 * 107.50472 * 13 12 10 16 16 C 1.53781 * 87.08198 * 139.98330 * 15 13 12 17 17 H 1.08998 * 113.69162 * 220.01251 * 16 15 13 18 18 O 1.42901 * 113.61534 * 89.11121 * 16 15 13 19 19 C 1.35902 * 116.99795 * 105.83525 * 18 16 15 20 20 C 1.38735 * 120.05433 * 354.30079 * 19 18 16 21 21 C 1.38146 * 119.94263 * 179.97438 * 20 19 18 22 22 C 1.38263 * 120.05460 * 359.97438 * 21 20 19 23 23 C 1.38268 * 120.11502 * 0.28378 * 22 21 20 24 24 C 1.38151 * 120.05089 * 359.44666 * 23 22 21 25 25 C 1.53772 * 113.61518 * 205.00197 * 13 12 10 26 26 C 1.39840 * 119.65774 * 0.25811 * 7 6 5 27 27 C 1.37887 * 119.82177 * 359.46513 * 26 7 6 28 28 H 0.96700 * 114.00215 * 299.99719 * 1 2 3 29 29 H 1.09003 * 109.47375 * 240.00273 * 2 1 3 30 30 H 1.48507 * 110.00362 * 178.68013 * 3 2 1 31 31 H 1.48504 * 110.00334 * 299.99986 * 3 2 1 32 32 H 1.08001 * 119.91639 * 359.97438 * 5 4 2 33 33 H 1.08005 * 120.08951 * 180.02562 * 6 5 4 34 34 H 1.07996 * 120.00467 * 0.02562 * 8 7 6 35 35 H 1.08001 * 120.00190 * 0.02562 * 9 8 7 36 36 H 0.97001 * 119.99787 * 0.02562 * 12 10 9 37 37 H 1.08994 * 113.61871 * 25.43250 * 15 13 12 38 38 H 1.09007 * 113.61054 * 254.52962 * 15 13 12 39 39 H 1.07995 * 120.02712 * 359.97438 * 20 19 18 40 40 H 1.07995 * 119.96919 * 179.97438 * 21 20 19 41 41 H 1.07997 * 119.94116 * 179.97438 * 22 21 20 42 42 H 1.07991 * 119.97361 * 179.71875 * 23 22 21 43 43 H 1.07996 * 120.02722 * 180.27674 * 24 23 22 44 44 H 1.09008 * 113.61578 * 105.46755 * 25 13 12 45 45 H 1.09000 * 113.69238 * 334.57960 * 25 13 12 46 46 H 1.08000 * 120.08501 * 179.74936 * 26 7 6 47 47 H 1.08002 * 119.90949 * 180.27642 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6824 -2.0619 1.3949 6 6 2.1384 -2.7189 2.5182 7 6 2.8544 -2.0161 3.4924 8 6 3.3442 -2.7099 4.6948 9 6 4.0336 -2.0289 5.6320 10 6 4.5203 -2.7189 6.8283 11 8 4.3029 -3.9071 6.9764 12 7 5.2101 -2.0382 7.7650 13 6 5.6975 -2.7286 8.9617 14 1 5.1254 -3.6266 9.1949 15 6 7.2198 -2.9462 8.9702 16 6 7.1822 -2.5977 10.4675 17 1 8.0177 -1.9785 10.7942 18 8 6.9659 -3.7291 11.3133 19 6 8.0362 -4.1905 12.0122 20 6 9.2934 -3.6441 11.7987 21 6 10.3797 -4.1145 12.5108 22 6 10.2146 -5.1285 13.4361 23 6 8.9636 -5.6784 13.6470 24 6 7.8731 -5.2077 12.9414 25 6 5.9029 -1.7984 10.1689 26 6 3.0976 -0.6497 3.3212 27 6 2.6400 -0.0082 2.1897 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5138 -0.8900 30 1 3.5346 1.7704 0.0321 31 1 1.5614 2.4680 -1.2085 32 1 1.1290 -2.6032 0.6418 33 1 1.9438 -3.7736 2.6449 34 1 3.1512 -3.7643 4.8261 35 1 4.2263 -0.9744 5.5008 36 1 5.3837 -1.0912 7.6468 37 1 7.7677 -2.2223 8.3670 38 1 7.5148 -3.9761 8.7688 39 1 9.4228 -2.8518 11.0763 40 1 11.3587 -3.6898 12.3446 41 1 11.0652 -5.4952 13.9916 42 1 8.8381 -6.4734 14.3670 43 1 6.8954 -5.6344 13.1096 44 1 5.1346 -1.9015 10.9353 45 1 6.0907 -0.7602 9.8949 46 1 3.6463 -0.0994 4.0712 47 1 2.8309 1.0461 2.0540 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_12360594.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:00 Heat of formation + Delta-G solvation = 1.675791 kcal Electronic energy + Delta-G solvation = -28181.258072 eV Core-core repulsion = 24069.325414 eV Total energy + Delta-G solvation = -4111.932657 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.151 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.73722 -40.85674 -40.46485 -39.30887 -37.84659 -37.31106 -35.07965 -34.20722 -32.29711 -31.92444 -31.30732 -30.61460 -27.53763 -26.96257 -26.07209 -24.29758 -23.95702 -23.38939 -23.06345 -21.97710 -21.05663 -20.26865 -19.26311 -18.88461 -18.11615 -17.58205 -17.13569 -16.97344 -16.70620 -16.58096 -16.33713 -16.10452 -15.91942 -15.69487 -15.36601 -15.31667 -15.10815 -14.85700 -14.63859 -14.36683 -14.18963 -13.96275 -13.88172 -13.67059 -13.53577 -13.40252 -13.20647 -13.03947 -12.56070 -12.49760 -12.28190 -12.10275 -12.07428 -11.79949 -11.51302 -11.39841 -11.36277 -10.90425 -10.50377 -10.09576 -10.08076 -9.93222 -9.31842 -9.13634 -5.11047 -0.60122 0.29244 0.40819 0.51504 0.86983 1.21285 1.56598 1.91133 2.04321 2.16161 2.25829 2.74208 2.85446 3.26797 3.34815 3.36926 3.49567 3.57725 3.66839 3.72565 3.79495 3.80283 3.89399 3.97648 4.07366 4.10036 4.17009 4.23542 4.29139 4.34888 4.42568 4.44993 4.46909 4.53858 4.63841 4.68549 4.74139 4.77723 4.87112 4.88278 4.97101 5.02422 5.06906 5.09260 5.29559 5.36950 5.39172 5.47299 5.49388 5.53557 5.62858 5.79804 5.84724 6.46585 6.48424 6.49237 7.23758 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.071 4.071 3 Si 0.687 3.313 4 C -0.108 4.108 5 C -0.094 4.094 6 C -0.092 4.092 7 C -0.073 4.073 8 C -0.015 4.015 9 C -0.215 4.215 10 C 0.548 3.452 11 O -0.541 6.541 12 N -0.718 5.718 13 C 0.130 3.870 14 H 0.122 0.878 15 C -0.170 4.170 16 C 0.058 3.942 17 H 0.095 0.905 18 O -0.293 6.293 19 C 0.129 3.871 20 C -0.209 4.209 21 C -0.081 4.081 22 C -0.158 4.158 23 C -0.080 4.080 24 C -0.152 4.152 25 C -0.141 4.141 26 C -0.096 4.096 27 C -0.118 4.118 28 H 0.380 0.620 29 H 0.115 0.885 30 H -0.257 1.257 31 H -0.254 1.254 32 H 0.130 0.870 33 H 0.132 0.868 34 H 0.138 0.862 35 H 0.131 0.869 36 H 0.402 0.598 37 H 0.098 0.902 38 H 0.083 0.917 39 H 0.129 0.871 40 H 0.125 0.875 41 H 0.124 0.876 42 H 0.130 0.870 43 H 0.131 0.869 44 H 0.089 0.911 45 H 0.105 0.895 46 H 0.132 0.868 47 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.435 5.558 1.814 6.020 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.182 4.182 3 Si 0.588 3.412 4 C -0.108 4.108 5 C -0.113 4.113 6 C -0.110 4.110 7 C -0.073 4.073 8 C -0.034 4.034 9 C -0.236 4.236 10 C 0.338 3.662 11 O -0.419 6.419 12 N -0.368 5.368 13 C 0.025 3.975 14 H 0.140 0.860 15 C -0.209 4.209 16 C 0.001 3.999 17 H 0.113 0.887 18 O -0.206 6.206 19 C 0.084 3.916 20 C -0.228 4.228 21 C -0.099 4.099 22 C -0.176 4.176 23 C -0.098 4.098 24 C -0.171 4.171 25 C -0.179 4.179 26 C -0.113 4.113 27 C -0.135 4.135 28 H 0.227 0.773 29 H 0.132 0.868 30 H -0.182 1.182 31 H -0.179 1.179 32 H 0.148 0.852 33 H 0.150 0.850 34 H 0.156 0.844 35 H 0.149 0.851 36 H 0.237 0.763 37 H 0.117 0.883 38 H 0.101 0.899 39 H 0.147 0.853 40 H 0.143 0.857 41 H 0.142 0.858 42 H 0.148 0.852 43 H 0.149 0.851 44 H 0.108 0.892 45 H 0.123 0.877 46 H 0.150 0.850 47 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 1.645 4.927 0.936 5.278 hybrid contribution 0.481 -0.006 -0.288 0.561 sum 2.127 4.921 0.648 5.400 Atomic orbital electron populations 1.86519 1.16911 1.81706 1.49252 1.25104 0.85392 1.10212 0.97478 0.94783 0.81045 0.77954 0.87373 1.20527 0.98641 0.95021 0.96633 1.21000 0.98802 0.93731 0.97718 1.21475 0.96183 1.00214 0.93112 1.19073 0.99753 0.93632 0.94858 1.22422 0.90781 1.00051 0.90192 1.22896 1.04293 1.00853 0.95535 1.18387 0.77616 0.86849 0.83366 1.90847 1.57421 1.15308 1.78320 1.45861 1.56690 1.13113 1.21184 1.22519 0.94209 0.97090 0.83648 0.85994 1.24025 0.97522 1.04011 0.95378 1.23138 0.99439 0.87288 0.90060 0.88709 1.86088 1.33243 1.45511 1.55787 1.19024 0.86183 0.94405 0.92002 1.21275 0.92529 1.04201 1.04748 1.20992 0.98263 0.95837 0.94787 1.21131 0.97685 0.98532 1.00278 1.21030 0.92009 0.98684 0.98094 1.20500 1.00363 0.98437 0.97755 1.23588 0.97370 0.98846 0.98071 1.21355 0.98916 0.93641 0.97424 1.20930 0.98995 0.99382 0.94228 0.77305 0.86797 1.18218 1.17864 0.85188 0.85030 0.84445 0.85146 0.76327 0.88313 0.89855 0.85329 0.85712 0.85768 0.85199 0.85106 0.89196 0.87700 0.85030 0.85242 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.10 12.83 -35.23 -0.45 -0.35 16 2 C -0.07 0.05 2.80 36.01 0.10 0.15 16 3 Si 0.69 -1.12 29.78 -169.99 -5.06 -6.19 16 4 C -0.11 0.06 5.36 -104.50 -0.56 -0.50 16 5 C -0.09 0.00 9.66 -39.65 -0.38 -0.38 16 6 C -0.09 0.01 9.80 -39.11 -0.38 -0.37 16 7 C -0.07 0.01 5.87 -105.06 -0.62 -0.60 16 8 C -0.01 0.00 9.46 -37.16 -0.35 -0.35 16 9 C -0.22 0.12 9.41 -37.50 -0.35 -0.23 16 10 C 0.55 1.01 7.74 -12.96 -0.10 0.91 16 11 O -0.54 -3.37 15.83 5.19 0.08 -3.29 16 12 N -0.72 0.74 5.35 -54.41 -0.29 0.45 16 13 C 0.13 -0.01 4.17 -67.12 -0.28 -0.29 16 14 H 0.12 0.33 7.46 -51.93 -0.39 -0.06 16 15 C -0.17 0.12 7.71 -25.92 -0.20 -0.08 16 16 C 0.06 -0.04 3.75 -25.92 -0.10 -0.14 16 17 H 0.10 -0.20 5.96 -51.93 -0.31 -0.51 16 18 O -0.29 -0.64 10.06 -19.43 -0.20 -0.83 16 19 C 0.13 0.30 6.68 -39.22 -0.26 0.04 16 20 C -0.21 -0.24 9.02 -39.43 -0.36 -0.59 16 21 C -0.08 -0.06 10.04 -39.61 -0.40 -0.46 16 22 C -0.16 -0.12 10.04 -39.56 -0.40 -0.52 16 23 C -0.08 -0.08 10.04 -39.60 -0.40 -0.48 16 24 C -0.15 -0.31 9.99 -39.43 -0.39 -0.70 16 25 C -0.14 0.30 7.66 -25.92 -0.20 0.10 16 26 C -0.10 0.13 9.41 -39.11 -0.37 -0.24 16 27 C -0.12 0.17 8.65 -39.65 -0.34 -0.17 16 28 H 0.38 -1.54 8.70 45.56 0.40 -1.14 16 29 H 0.11 -0.03 7.96 -51.93 -0.41 -0.45 16 30 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 31 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 32 H 0.13 -0.07 8.06 -52.49 -0.42 -0.49 16 33 H 0.13 -0.19 8.06 -52.48 -0.42 -0.62 16 34 H 0.14 0.14 7.52 -52.49 -0.39 -0.26 16 35 H 0.13 -0.47 6.07 -52.49 -0.32 -0.79 16 36 H 0.40 -1.71 8.71 -40.82 -0.36 -2.07 16 37 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 38 H 0.08 0.10 8.14 -51.92 -0.42 -0.32 16 39 H 0.13 -0.10 5.92 -52.49 -0.31 -0.41 16 40 H 0.12 -0.15 8.06 -52.49 -0.42 -0.58 16 41 H 0.12 -0.12 8.06 -52.49 -0.42 -0.55 16 42 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 43 H 0.13 0.14 8.06 -52.49 -0.42 -0.28 16 44 H 0.09 -0.13 8.14 -51.92 -0.42 -0.55 16 45 H 0.10 -0.47 8.12 -51.93 -0.42 -0.89 16 46 H 0.13 -0.48 6.17 -52.49 -0.32 -0.81 16 47 H 0.13 -0.45 4.88 -52.49 -0.26 -0.71 16 LS Contribution 395.58 15.07 5.96 5.96 Total: 0.00 -9.28 395.58 -12.39 -21.67 By element: Atomic # 1 Polarization: -6.41 SS G_CDS: -6.10 Total: -12.51 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: -6.34 Total: -4.92 kcal Atomic # 7 Polarization: 0.74 SS G_CDS: -0.29 Total: 0.45 kcal Atomic # 8 Polarization: -3.90 SS G_CDS: -0.57 Total: -4.47 kcal Atomic # 14 Polarization: -1.12 SS G_CDS: -5.06 Total: -6.19 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -9.28 -12.39 -21.67 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_12360594.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.345 kcal (2) G-P(sol) polarization free energy of solvation -9.275 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.070 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.394 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.669 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.676 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds