Wall clock time and date at job start Tue Mar 9 2021 12:58:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.36413 * 125.80202 * 2 1 4 4 C 1.47377 * 127.19382 * 0.02562 * 3 2 1 5 5 O 1.21614 * 119.99846 * 0.02562 * 4 3 2 6 6 N 1.34778 * 120.00200 * 180.02562 * 4 3 2 7 7 C 1.46501 * 120.00018 * 180.02562 * 6 4 3 8 8 H 1.09003 * 112.85101 * 336.19082 * 7 6 4 9 9 C 1.53781 * 113.61676 * 107.50445 * 7 6 4 10 10 C 1.53782 * 87.08395 * 89.11342 * 9 7 6 11 11 H 1.08999 * 113.61286 * 270.88236 * 10 9 7 12 12 O 1.42896 * 113.69126 * 139.99527 * 10 9 7 13 13 C 1.35896 * 117.00159 * 104.58171 * 12 10 9 14 14 C 1.38738 * 120.05459 * 173.77445 * 13 12 10 15 15 C 1.38144 * 119.94200 * 179.74352 * 14 13 12 16 16 C 1.38265 * 120.05430 * 0.51316 * 15 14 13 17 17 C 1.38260 * 120.11153 * 359.76917 * 16 15 14 18 18 C 1.38134 * 120.05946 * 359.97293 * 17 16 15 19 19 C 1.53779 * 87.08067 * 25.43204 * 10 9 7 20 20 C 1.47021 * 105.61600 * 180.02562 * 3 2 1 21 21 C 1.34177 * 105.95144 * 359.97438 * 20 3 2 22 22 C 1.50703 * 125.43429 * 179.97438 * 21 20 3 23 23 O 1.42898 * 109.47361 * 65.00193 * 22 21 20 24 24 Si 1.86307 * 109.46906 * 185.00406 * 22 21 20 25 25 O 1.33654 * 125.80066 * 180.33739 * 2 1 3 26 26 H 1.09000 * 109.47376 * 89.99541 * 1 2 3 27 27 H 1.09002 * 109.47185 * 209.99876 * 1 2 3 28 28 H 1.09002 * 109.46338 * 329.99490 * 1 2 3 29 29 H 0.97001 * 119.99888 * 0.02562 * 6 4 3 30 30 H 1.08996 * 113.61555 * 203.66661 * 9 7 6 31 31 H 1.08997 * 113.61055 * 334.56244 * 9 7 6 32 32 H 1.08004 * 120.02744 * 0.02562 * 14 13 12 33 33 H 1.08007 * 119.96976 * 180.23247 * 15 14 13 34 34 H 1.08003 * 119.93872 * 179.74196 * 16 15 14 35 35 H 1.08006 * 119.96856 * 179.97438 * 17 16 15 36 36 H 1.07998 * 120.03263 * 179.97438 * 18 17 16 37 37 H 1.08998 * 113.61408 * 220.02175 * 19 10 9 38 38 H 1.09001 * 113.61480 * 89.11194 * 19 10 9 39 39 H 1.08006 * 127.02355 * 180.02562 * 20 3 2 40 40 H 1.09001 * 109.47269 * 304.99860 * 22 21 20 41 41 H 0.96698 * 114.00043 * 59.99881 * 23 22 21 42 42 H 1.48493 * 109.99874 * 179.97438 * 24 22 21 43 43 H 1.48501 * 109.99861 * 301.31804 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8740 2.5157 0.0005 5 8 0.6890 2.7892 0.0015 6 7 2.7931 3.5015 -0.0001 7 6 2.3646 4.9025 0.0010 8 1 1.3616 5.0386 -0.4033 9 6 2.5912 5.6150 1.3448 10 6 3.9888 5.9873 0.8223 11 1 4.7516 5.2415 1.0461 12 8 4.3941 7.3147 1.1622 13 6 5.3113 7.4442 2.1565 14 6 5.8457 8.6902 2.4509 15 6 6.7741 8.8200 3.4657 16 6 7.1785 7.7078 4.1806 17 6 6.6518 6.4641 3.8853 18 6 5.7193 6.3298 2.8751 19 6 3.4051 5.8653 -0.5952 20 6 3.6849 0.5990 -0.0006 21 6 3.5858 -0.7391 -0.0004 22 6 4.7459 -1.7011 -0.0014 23 8 5.4772 -1.5668 1.2189 24 14 4.1067 -3.4444 -0.1538 25 8 2.2889 -1.0840 -0.0064 26 1 -0.3634 0.0001 -1.0276 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3632 0.8900 0.5139 29 1 3.7383 3.2834 -0.0012 30 1 1.9392 6.4747 1.4986 31 1 2.6105 4.9389 2.1996 32 1 5.5329 9.5587 1.8902 33 1 7.1876 9.7904 3.6977 34 1 7.9075 7.8108 4.9708 35 1 6.9697 5.5968 4.4450 36 1 5.3084 5.3580 2.6445 37 1 4.0814 5.3913 -1.3066 38 1 2.9755 6.7935 -0.9719 39 1 4.5929 1.1840 -0.0004 40 1 5.4010 -1.4794 -0.8439 41 1 4.9555 -1.7497 2.0123 42 1 5.2410 -4.4028 -0.1565 43 1 3.1871 -3.7484 0.9719 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_13308374.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:06 Heat of formation + Delta-G solvation = -26.539526 kcal Electronic energy + Delta-G solvation = -27362.521987 eV Core-core repulsion = 23342.673530 eV Total energy + Delta-G solvation = -4019.848457 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.135 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -43.79959 -41.73575 -40.55729 -39.23188 -38.24507 -37.46306 -34.53282 -33.76041 -33.08017 -31.93248 -30.68566 -29.49000 -26.98060 -26.69976 -25.65562 -24.34986 -23.50066 -22.99560 -22.32680 -20.94171 -20.39082 -19.49208 -19.01820 -18.06786 -17.73787 -17.36648 -17.06435 -16.77134 -16.68497 -16.36235 -16.09174 -15.93103 -15.71299 -15.49333 -15.04332 -14.83092 -14.42439 -14.31248 -14.24572 -14.03208 -13.91407 -13.90446 -13.65637 -13.54626 -13.16913 -13.01476 -12.89768 -12.64912 -12.48798 -12.13399 -11.95483 -11.59987 -11.41174 -11.13044 -10.94971 -10.77913 -10.20996 -9.94902 -9.62807 -9.13493 -5.05042 0.24442 0.39356 0.50664 0.77142 1.05619 1.37356 1.64105 1.85687 2.01140 2.19489 2.26800 2.84489 3.03601 3.22860 3.27825 3.30767 3.60453 3.62134 3.70053 3.70746 3.89950 3.96032 4.06792 4.18425 4.21412 4.27513 4.34692 4.45323 4.50973 4.51442 4.56144 4.57942 4.65709 4.65914 4.70549 4.77484 4.81301 4.89453 5.06099 5.06810 5.15975 5.34970 5.43215 5.47714 5.61540 5.83524 5.84771 6.13932 6.37912 6.47650 7.14491 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 C 0.099 3.901 3 C -0.255 4.255 4 C 0.598 3.402 5 O -0.534 6.534 6 N -0.710 5.710 7 C 0.125 3.875 8 H 0.118 0.882 9 C -0.166 4.166 10 C 0.054 3.946 11 H 0.098 0.902 12 O -0.300 6.300 13 C 0.129 3.871 14 C -0.153 4.153 15 C -0.080 4.080 16 C -0.159 4.159 17 C -0.080 4.080 18 C -0.210 4.210 19 C -0.135 4.135 20 C -0.148 4.148 21 C -0.053 4.053 22 C -0.034 4.034 23 O -0.521 6.521 24 Si 0.701 3.299 25 O -0.168 6.168 26 H 0.094 0.906 27 H 0.081 0.919 28 H 0.111 0.889 29 H 0.401 0.599 30 H 0.105 0.895 31 H 0.078 0.922 32 H 0.131 0.869 33 H 0.130 0.870 34 H 0.124 0.876 35 H 0.124 0.876 36 H 0.126 0.874 37 H 0.085 0.915 38 H 0.111 0.889 39 H 0.157 0.843 40 H 0.138 0.862 41 H 0.381 0.619 42 H -0.248 1.248 43 H -0.255 1.255 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.262 -1.642 -1.472 2.541 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.045 3.955 3 C -0.260 4.260 4 C 0.387 3.613 5 O -0.412 6.412 6 N -0.361 5.361 7 C 0.019 3.981 8 H 0.136 0.864 9 C -0.205 4.205 10 C -0.002 4.002 11 H 0.116 0.884 12 O -0.213 6.213 13 C 0.083 3.917 14 C -0.172 4.172 15 C -0.098 4.098 16 C -0.177 4.177 17 C -0.098 4.098 18 C -0.229 4.229 19 C -0.173 4.173 20 C -0.168 4.168 21 C -0.101 4.101 22 C -0.144 4.144 23 O -0.328 6.328 24 Si 0.600 3.400 25 O -0.065 6.065 26 H 0.113 0.887 27 H 0.100 0.900 28 H 0.129 0.871 29 H 0.236 0.764 30 H 0.124 0.876 31 H 0.097 0.903 32 H 0.149 0.851 33 H 0.148 0.852 34 H 0.142 0.858 35 H 0.142 0.858 36 H 0.144 0.856 37 H 0.103 0.897 38 H 0.130 0.870 39 H 0.175 0.825 40 H 0.155 0.845 41 H 0.229 0.771 42 H -0.172 1.172 43 H -0.179 1.179 Dipole moment (debyes) X Y Z Total from point charges 0.656 -2.245 -1.633 2.853 hybrid contribution 0.899 0.369 1.269 1.598 sum 1.555 -1.876 -0.364 2.464 Atomic orbital electron populations 1.20721 0.83262 1.05450 1.04928 1.22936 0.94100 0.82818 0.95611 1.21066 0.93278 0.93635 1.17982 1.17146 0.85331 0.83637 0.75228 1.90789 1.16447 1.83923 1.50079 1.45467 1.09709 1.05052 1.75888 1.21599 1.00088 0.79621 0.96760 0.86413 1.24034 0.96755 1.01344 0.98341 1.24231 0.95700 0.83448 0.96853 0.88405 1.86164 1.55424 1.29239 1.50496 1.19043 0.89588 0.94340 0.88683 1.20509 1.00088 0.95682 1.00927 1.21034 0.95598 0.99062 0.94113 1.21123 1.02200 0.92750 1.01637 1.20987 0.95156 0.97762 0.95928 1.21248 1.03211 0.98116 1.00286 1.23597 0.97858 1.00534 0.95353 1.22570 0.96394 0.93526 1.04287 1.22557 0.82918 0.95559 1.09112 1.24364 0.91262 1.08017 0.90750 1.86662 1.39337 1.91542 1.15239 0.94370 0.81430 0.73536 0.90639 1.83691 1.16391 1.35037 1.71333 0.88720 0.89982 0.87087 0.76428 0.87640 0.90349 0.85139 0.85223 0.85780 0.85770 0.85615 0.89673 0.87044 0.82494 0.84460 0.77071 1.17243 1.17946 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.05 9.89 36.01 0.36 0.41 16 2 C 0.10 0.10 7.37 -34.97 -0.26 -0.15 16 3 C -0.26 -0.32 6.31 -103.28 -0.65 -0.97 16 4 C 0.60 1.21 7.81 -12.54 -0.10 1.12 16 5 O -0.53 -2.57 14.44 5.26 0.08 -2.49 16 6 N -0.71 0.45 5.26 -54.10 -0.28 0.16 16 7 C 0.12 -0.09 4.33 -67.11 -0.29 -0.38 16 8 H 0.12 0.06 7.46 -51.93 -0.39 -0.33 16 9 C -0.17 0.07 7.71 -25.92 -0.20 -0.13 16 10 C 0.05 -0.03 3.51 -25.92 -0.09 -0.13 16 11 H 0.10 -0.17 6.04 -51.93 -0.31 -0.48 16 12 O -0.30 -0.59 10.15 -19.41 -0.20 -0.78 16 13 C 0.13 0.29 6.68 -39.21 -0.26 0.03 16 14 C -0.15 -0.29 9.99 -39.43 -0.39 -0.68 16 15 C -0.08 -0.08 10.04 -39.61 -0.40 -0.47 16 16 C -0.16 -0.14 10.04 -39.56 -0.40 -0.53 16 17 C -0.08 -0.07 10.04 -39.61 -0.40 -0.47 16 18 C -0.21 -0.27 9.01 -39.44 -0.36 -0.63 16 19 C -0.14 0.23 7.66 -25.92 -0.20 0.04 16 20 C -0.15 0.04 10.48 -37.45 -0.39 -0.35 16 21 C -0.05 0.01 6.18 -35.74 -0.22 -0.21 16 22 C -0.03 0.05 2.97 36.01 0.11 0.16 16 23 O -0.52 0.23 12.88 -35.23 -0.45 -0.23 16 24 Si 0.70 -1.10 32.09 -169.99 -5.46 -6.56 16 25 O -0.17 -0.12 8.90 7.67 0.07 -0.05 16 26 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 27 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 28 H 0.11 0.08 6.48 -51.93 -0.34 -0.26 16 29 H 0.40 -1.09 7.87 -40.82 -0.32 -1.42 16 30 H 0.11 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 32 H 0.13 0.10 8.06 -52.48 -0.42 -0.32 16 33 H 0.13 -0.15 8.06 -52.48 -0.42 -0.57 16 34 H 0.12 -0.11 8.06 -52.48 -0.42 -0.54 16 35 H 0.12 -0.12 8.06 -52.48 -0.42 -0.54 16 36 H 0.13 -0.04 5.95 -52.49 -0.31 -0.35 16 37 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 38 H 0.11 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.16 -0.37 7.74 -52.48 -0.41 -0.77 16 40 H 0.14 -0.43 7.96 -51.93 -0.41 -0.84 16 41 H 0.38 -1.13 8.70 45.56 0.40 -0.74 16 42 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 43 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 LS Contribution 367.26 15.07 5.53 5.53 Total: 0.00 -7.57 367.26 -10.37 -17.94 By element: Atomic # 1 Polarization: -4.67 SS G_CDS: -5.52 Total: -10.19 kcal Atomic # 6 Polarization: 0.80 SS G_CDS: -4.14 Total: -3.34 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -0.28 Total: 0.16 kcal Atomic # 8 Polarization: -3.04 SS G_CDS: -0.51 Total: -3.55 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.46 Total: -6.56 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -7.57 -10.37 -17.94 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_13308374.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.598 kcal (2) G-P(sol) polarization free energy of solvation -7.567 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.166 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.374 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.941 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.540 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds