Wall clock time and date at job start Tue Mar 9 2021 12:58:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37794 * 119.84943 * 2 1 4 4 C 1.39711 * 119.90922 * 180.28063 * 3 2 1 5 5 C 1.47528 * 120.19080 * 179.74567 * 4 3 2 6 6 O 1.21594 * 119.99672 * 179.72044 * 5 4 3 7 7 N 1.34774 * 120.00318 * 359.71717 * 5 4 3 8 8 C 1.46500 * 120.00023 * 180.02562 * 7 5 4 9 9 H 1.09002 * 112.85165 * 336.19635 * 8 7 5 10 10 C 1.54058 * 113.69568 * 107.46866 * 8 7 5 11 11 C 1.53779 * 86.98309 * 139.98959 * 10 8 7 12 12 H 1.09009 * 113.61269 * 219.97771 * 11 10 8 13 13 O 1.42897 * 113.61881 * 89.16378 * 11 10 8 14 14 C 1.35893 * 117.00242 * 105.71207 * 13 11 10 15 15 C 1.38739 * 120.05589 * 174.02180 * 14 13 11 16 16 C 1.38146 * 119.94321 * 180.27462 * 15 14 13 17 17 C 1.38268 * 120.05732 * 0.02562 * 16 15 14 18 18 C 1.38261 * 120.11166 * 359.97438 * 17 16 15 19 19 C 1.38150 * 120.05643 * 0.02562 * 18 17 16 20 20 C 1.53779 * 87.17432 * 334.56901 * 11 10 8 21 21 C 1.40136 * 119.61294 * 359.46220 * 4 3 2 22 22 O 1.35656 * 120.14756 * 180.23542 * 21 4 3 23 23 C 1.38707 * 119.70409 * 0.25848 * 21 4 3 24 24 C 1.50695 * 119.95909 * 179.97438 * 23 21 4 25 25 O 1.42899 * 109.47315 * 284.99780 * 24 23 21 26 26 Si 1.86302 * 109.47066 * 164.99938 * 24 23 21 27 27 C 1.38065 * 120.08284 * 359.97438 * 23 21 4 28 28 H 1.09006 * 109.46884 * 270.27755 * 1 2 3 29 29 H 1.08993 * 109.47034 * 30.27700 * 1 2 3 30 30 H 1.08998 * 109.46775 * 150.28428 * 1 2 3 31 31 H 1.07998 * 120.04713 * 0.02562 * 3 2 1 32 32 H 0.96997 * 120.00075 * 359.97438 * 7 5 4 33 33 H 1.08999 * 113.60786 * 25.48375 * 10 8 7 34 34 H 1.08999 * 113.69161 * 254.50405 * 10 8 7 35 35 H 1.08000 * 120.02709 * 0.26312 * 15 14 13 36 36 H 1.07997 * 119.96906 * 179.97438 * 16 15 14 37 37 H 1.07998 * 119.94405 * 179.97438 * 17 16 15 38 38 H 1.08000 * 119.97725 * 179.97438 * 18 17 16 39 39 H 1.07998 * 120.02945 * 179.97438 * 19 18 17 40 40 H 1.09004 * 113.61280 * 140.02954 * 20 11 10 41 41 H 1.09000 * 113.61560 * 270.84384 * 20 11 10 42 42 H 0.96696 * 113.99880 * 90.00119 * 22 21 4 43 43 H 1.08997 * 109.47519 * 45.00515 * 24 23 21 44 44 H 0.96701 * 113.99975 * 299.99927 * 25 24 23 45 45 H 1.48505 * 109.99921 * 58.68225 * 26 24 23 46 46 H 1.48501 * 110.00326 * 179.97438 * 26 24 23 47 47 H 1.08000 * 119.80550 * 180.02562 * 27 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5899 1.1966 -0.0059 5 6 4.3305 2.4725 -0.0116 6 8 5.5464 2.4697 -0.0116 7 7 3.6593 3.6413 -0.0169 8 6 4.3948 4.9083 -0.0231 9 1 5.4022 4.8149 0.3824 10 6 4.3388 5.6500 -1.3722 11 6 4.1909 6.9476 -0.5603 12 1 3.4790 7.6526 -0.9897 13 8 5.4386 7.5561 -0.2212 14 6 5.7863 8.6753 -0.9092 15 6 6.9211 9.3877 -0.5492 16 6 7.2693 10.5283 -1.2466 17 6 6.4877 10.9602 -2.3023 18 6 5.3564 10.2520 -2.6630 19 6 5.0039 9.1108 -1.9688 20 6 3.5998 6.0849 0.5671 21 6 4.2837 -0.0210 -0.0004 22 8 5.6402 -0.0322 -0.0013 23 6 3.5772 -1.2146 0.0054 24 6 4.3174 -2.5272 0.0108 25 8 4.8542 -2.7767 -1.2898 26 14 3.1449 -3.8994 0.4724 27 6 2.1966 -1.2016 0.0064 28 1 -0.3633 0.0050 1.0277 29 1 -0.3633 0.8874 -0.5181 30 1 -0.3633 -0.8925 -0.5094 31 1 1.6512 2.1295 0.0004 32 1 2.6894 3.6435 -0.0173 33 1 3.4599 5.4055 -1.9687 34 1 5.2668 5.5944 -1.9414 35 1 7.5315 9.0511 0.2756 36 1 8.1523 11.0834 -0.9665 37 1 6.7614 11.8523 -2.8460 38 1 4.7473 10.5916 -3.4877 39 1 4.1198 8.5581 -2.2507 40 1 3.9313 6.3803 1.5626 41 1 2.5189 5.9604 0.5007 42 1 6.0341 -0.0311 0.8819 43 1 5.1293 -2.4836 0.7367 44 1 4.1866 -2.8285 -1.9875 45 1 2.0164 -3.9490 -0.4916 46 1 3.8626 -5.1995 0.4807 47 1 1.6510 -2.1336 0.0113 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_13422088.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:17 Heat of formation + Delta-G solvation = -53.244839 kcal Electronic energy + Delta-G solvation = -30633.905158 eV Core-core repulsion = 26329.134911 eV Total energy + Delta-G solvation = -4304.770246 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.150 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.91666 -41.43956 -40.21061 -39.14515 -38.02568 -37.71521 -37.20914 -34.44543 -33.13560 -32.58203 -31.89766 -30.61090 -27.71453 -26.97778 -26.87241 -26.56463 -24.72377 -23.42075 -23.18634 -22.06309 -21.48468 -20.78132 -19.64510 -19.25188 -18.41696 -17.97177 -17.54735 -17.12538 -16.94478 -16.78716 -16.67438 -16.14913 -16.02377 -15.92577 -15.62225 -15.39820 -15.34531 -14.92250 -14.83964 -14.65934 -14.36079 -14.28782 -13.94256 -13.69161 -13.64905 -13.53957 -13.41739 -13.22323 -13.08512 -12.68261 -12.51623 -12.49318 -12.25200 -12.07994 -11.79030 -11.69783 -11.51347 -11.38773 -10.87421 -10.48600 -10.22383 -10.03739 -9.92629 -9.55435 -9.13193 -5.04545 -0.36403 0.02463 0.41382 0.51982 1.18985 1.48660 1.74916 1.89250 2.04294 2.07675 2.55699 2.85986 3.15811 3.25075 3.30882 3.34435 3.46445 3.54620 3.61320 3.68149 3.79032 3.89611 3.97609 4.01915 4.05767 4.12418 4.24225 4.29708 4.40987 4.41867 4.47326 4.52363 4.52465 4.54025 4.62431 4.67584 4.69996 4.77093 4.87961 4.89168 4.92420 4.98513 5.08601 5.15456 5.27151 5.37155 5.43863 5.49605 5.54769 5.63378 5.85137 6.41398 6.43903 6.46909 6.76376 7.22603 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.165 4.165 5 C 0.560 3.440 6 O -0.514 6.514 7 N -0.720 5.720 8 C 0.132 3.868 9 H 0.123 0.877 10 C -0.171 4.171 11 C 0.059 3.941 12 H 0.095 0.905 13 O -0.293 6.293 14 C 0.129 3.871 15 C -0.152 4.152 16 C -0.080 4.080 17 C -0.158 4.158 18 C -0.081 4.081 19 C -0.209 4.209 20 C -0.140 4.140 21 C 0.192 3.808 22 O -0.467 6.467 23 C -0.151 4.151 24 C -0.066 4.066 25 O -0.519 6.519 26 Si 0.689 3.311 27 C -0.081 4.081 28 H 0.077 0.923 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.131 0.869 32 H 0.399 0.601 33 H 0.098 0.902 34 H 0.084 0.916 35 H 0.131 0.869 36 H 0.130 0.870 37 H 0.124 0.876 38 H 0.125 0.875 39 H 0.129 0.871 40 H 0.090 0.910 41 H 0.104 0.896 42 H 0.395 0.605 43 H 0.116 0.884 44 H 0.374 0.626 45 H -0.259 1.259 46 H -0.255 1.255 47 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.881 1.481 2.717 8.467 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.098 4.098 3 C -0.086 4.086 4 C -0.169 4.169 5 C 0.347 3.653 6 O -0.389 6.389 7 N -0.373 5.373 8 C 0.027 3.973 9 H 0.141 0.859 10 C -0.210 4.210 11 C 0.001 3.999 12 H 0.113 0.887 13 O -0.206 6.206 14 C 0.084 3.916 15 C -0.170 4.170 16 C -0.098 4.098 17 C -0.176 4.176 18 C -0.099 4.099 19 C -0.227 4.227 20 C -0.178 4.178 21 C 0.145 3.855 22 O -0.278 6.278 23 C -0.152 4.152 24 C -0.176 4.176 25 O -0.325 6.325 26 Si 0.590 3.410 27 C -0.099 4.099 28 H 0.096 0.904 29 H 0.089 0.911 30 H 0.089 0.911 31 H 0.148 0.852 32 H 0.234 0.766 33 H 0.116 0.884 34 H 0.102 0.898 35 H 0.149 0.851 36 H 0.148 0.852 37 H 0.142 0.858 38 H 0.143 0.857 39 H 0.147 0.853 40 H 0.109 0.891 41 H 0.122 0.878 42 H 0.253 0.747 43 H 0.134 0.866 44 H 0.221 0.779 45 H -0.184 1.184 46 H -0.180 1.180 47 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -6.735 0.616 2.366 7.165 hybrid contribution -0.515 0.372 -0.980 1.168 sum -7.250 0.988 1.386 7.447 Atomic orbital electron populations 1.20833 0.90036 1.03396 1.03063 1.19787 0.96741 0.92270 1.00952 1.21119 0.92114 0.98270 0.97074 1.20393 0.93944 0.93481 1.09041 1.18071 0.87366 0.83376 0.76456 1.90851 1.13001 1.87219 1.47867 1.45892 1.09982 1.05361 1.76017 1.22576 0.97807 0.80741 0.96145 0.85907 1.24079 1.04171 0.94843 0.97907 1.23127 0.85249 0.93776 0.97711 0.88714 1.86083 1.37368 1.38345 1.58817 1.19024 0.94626 0.86447 0.91527 1.20499 0.97157 0.96432 1.02932 1.21029 0.99100 0.95072 0.94624 1.21130 0.96307 1.01232 0.98948 1.20991 0.96418 0.93976 0.98491 1.21275 1.02248 1.00450 0.98776 1.23583 1.00517 0.94018 0.99722 1.18229 0.83966 0.89675 0.93656 1.84804 1.14059 1.95854 1.33101 1.20653 0.93972 0.95763 1.04778 1.24910 1.05102 0.98789 0.88754 1.86685 1.36467 1.93126 1.16181 0.95140 0.77895 0.77713 0.90255 1.21174 0.92903 0.98564 0.97262 0.90420 0.91115 0.91109 0.85167 0.76572 0.88355 0.89776 0.85105 0.85197 0.85767 0.85716 0.85340 0.89135 0.87756 0.74668 0.86568 0.77922 1.18412 1.17952 0.84624 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.44 10.00 36.01 0.36 0.80 16 2 C -0.10 0.17 5.87 -104.67 -0.61 -0.45 16 3 C -0.07 0.09 9.18 -39.19 -0.36 -0.27 16 4 C -0.16 -0.23 5.89 -104.85 -0.62 -0.85 16 5 C 0.56 1.59 7.76 -12.47 -0.10 1.49 16 6 O -0.51 -3.50 14.76 -16.60 -0.24 -3.74 16 7 N -0.72 0.34 5.31 -53.92 -0.29 0.06 16 8 C 0.13 0.01 4.18 -66.97 -0.28 -0.27 16 9 H 0.12 0.34 7.46 -51.93 -0.39 -0.05 16 10 C -0.17 0.07 7.73 -25.77 -0.20 -0.13 16 11 C 0.06 -0.04 3.73 -25.92 -0.10 -0.13 16 12 H 0.10 -0.19 5.97 -51.92 -0.31 -0.50 16 13 O -0.29 -0.66 10.06 -19.41 -0.20 -0.86 16 14 C 0.13 0.32 6.68 -39.21 -0.26 0.05 16 15 C -0.15 -0.32 9.99 -39.43 -0.39 -0.72 16 16 C -0.08 -0.09 10.04 -39.60 -0.40 -0.49 16 17 C -0.16 -0.14 10.04 -39.56 -0.40 -0.54 16 18 C -0.08 -0.07 10.04 -39.61 -0.40 -0.47 16 19 C -0.21 -0.27 9.01 -39.43 -0.36 -0.62 16 20 C -0.14 0.29 7.66 -25.92 -0.20 0.09 16 21 C 0.19 0.43 6.69 -38.70 -0.26 0.17 16 22 O -0.47 -1.71 10.91 -40.55 -0.44 -2.15 16 23 C -0.15 -0.06 5.27 -104.51 -0.55 -0.61 16 24 C -0.07 -0.01 2.38 36.00 0.09 0.07 16 25 O -0.52 -1.31 12.88 -35.23 -0.45 -1.77 16 26 Si 0.69 -0.95 30.24 -169.99 -5.14 -6.10 16 27 C -0.08 0.09 8.30 -39.53 -0.33 -0.24 16 28 H 0.08 -0.35 8.14 -51.93 -0.42 -0.78 16 29 H 0.07 -0.32 8.08 -51.93 -0.42 -0.74 16 30 H 0.07 -0.28 8.08 -51.93 -0.42 -0.70 16 31 H 0.13 -0.56 6.40 -52.49 -0.34 -0.90 16 32 H 0.40 -1.41 6.76 -40.82 -0.28 -1.69 16 33 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 34 H 0.08 0.14 8.14 -51.93 -0.42 -0.29 16 35 H 0.13 0.16 8.06 -52.49 -0.42 -0.27 16 36 H 0.13 -0.12 8.06 -52.49 -0.42 -0.55 16 37 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 38 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 39 H 0.13 -0.08 5.92 -52.49 -0.31 -0.39 16 40 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 41 H 0.10 -0.47 8.12 -51.93 -0.42 -0.89 16 42 H 0.39 -0.03 9.06 45.56 0.41 0.38 16 43 H 0.12 -0.05 7.83 -51.93 -0.41 -0.46 16 44 H 0.37 -0.18 8.70 45.56 0.40 0.21 16 45 H -0.26 0.02 6.68 56.52 0.38 0.39 16 46 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 47 H 0.14 -0.35 4.83 -52.49 -0.25 -0.61 16 LS Contribution 390.43 15.07 5.88 5.88 Total: 0.00 -10.39 390.43 -11.57 -21.96 By element: Atomic # 1 Polarization: -4.87 SS G_CDS: -5.34 Total: -10.21 kcal Atomic # 6 Polarization: 2.27 SS G_CDS: -5.36 Total: -3.09 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -0.29 Total: 0.06 kcal Atomic # 8 Polarization: -7.18 SS G_CDS: -1.34 Total: -8.51 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.14 Total: -6.10 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -10.39 -11.57 -21.96 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_13422088.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.281 kcal (2) G-P(sol) polarization free energy of solvation -10.390 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.670 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.574 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.964 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.245 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds