Wall clock time and date at job start Tue Mar 9 2021 12:58:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46964 * 2 1 4 4 C 1.50697 * 109.47057 * 119.99875 * 2 1 3 5 5 C 1.34495 * 125.49212 * 210.31263 * 4 2 1 6 6 C 1.46757 * 106.36465 * 180.13361 * 5 4 2 7 7 C 1.47264 * 126.96774 * 179.85852 * 6 5 4 8 8 O 1.21632 * 119.99471 * 179.67755 * 7 6 5 9 9 N 1.34770 * 120.00036 * 359.68263 * 7 6 5 10 10 C 1.46503 * 119.99978 * 180.02562 * 9 7 6 11 11 H 1.08998 * 112.85071 * 336.19126 * 10 9 7 12 12 C 1.54046 * 113.61923 * 107.50460 * 10 9 7 13 13 C 1.53781 * 86.98707 * 139.98106 * 12 10 9 14 14 H 1.08996 * 113.61650 * 219.98195 * 13 12 10 15 15 O 1.42900 * 113.61641 * 89.15688 * 13 12 10 16 16 C 1.35902 * 116.99625 * 105.71776 * 15 13 12 17 17 C 1.38738 * 120.05329 * 174.01870 * 16 15 13 18 18 C 1.38142 * 119.93853 * 179.76331 * 17 16 15 19 19 C 1.38267 * 120.06166 * 0.51401 * 18 17 16 20 20 C 1.38263 * 120.10762 * 359.74112 * 19 18 17 21 21 C 1.38143 * 120.05784 * 0.02562 * 20 19 18 22 22 C 1.53781 * 87.17315 * 334.56822 * 13 12 10 23 23 C 1.36329 * 106.05938 * 359.59334 * 6 5 4 24 24 C 1.51002 * 126.79013 * 180.26233 * 23 6 5 25 25 C 1.53395 * 108.25155 * 164.32680 * 24 23 6 26 26 C 1.53150 * 109.04828 * 48.45853 * 25 24 23 27 27 C 1.53133 * 109.52489 * 290.42621 * 26 25 24 28 28 N 1.35211 * 108.66424 * 0.25589 * 23 6 5 29 29 H 0.96702 * 114.00171 * 299.99782 * 1 2 3 30 30 H 1.08998 * 109.46675 * 240.00115 * 2 1 3 31 31 H 1.48507 * 109.99828 * 300.00183 * 3 2 1 32 32 H 1.48505 * 109.99941 * 61.31860 * 3 2 1 33 33 H 1.07995 * 126.81806 * 0.02562 * 5 4 2 34 34 H 0.96998 * 120.00695 * 0.02562 * 9 7 6 35 35 H 1.08994 * 113.61905 * 25.47307 * 12 10 9 36 36 H 1.09002 * 113.69464 * 254.48934 * 12 10 9 37 37 H 1.07992 * 120.02634 * 0.02562 * 17 16 15 38 38 H 1.08010 * 119.96953 * 180.24924 * 18 17 16 39 39 H 1.08001 * 119.94592 * 179.71601 * 19 18 17 40 40 H 1.08005 * 119.97056 * 180.02562 * 20 19 18 41 41 H 1.07999 * 120.02782 * 179.97438 * 21 20 19 42 42 H 1.08998 * 113.61488 * 140.02022 * 22 13 12 43 43 H 1.09001 * 113.61619 * 270.85061 * 22 13 12 44 44 H 1.09000 * 109.70266 * 284.01443 * 24 23 6 45 45 H 1.08989 * 109.71052 * 44.63705 * 24 23 6 46 46 H 1.09000 * 109.53957 * 288.58507 * 25 24 23 47 47 H 1.09002 * 109.61374 * 168.37294 * 25 24 23 48 48 H 1.09008 * 109.46359 * 170.41177 * 26 25 24 49 49 H 1.09000 * 109.46505 * 50.44560 * 26 25 24 50 50 H 1.09000 * 109.56591 * 291.16832 * 27 26 25 51 51 H 1.09010 * 109.65813 * 170.88968 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 3.0829 -0.4423 1.8715 6 6 3.1552 -1.3774 3.0002 7 6 4.2332 -1.4790 3.9984 8 8 4.1601 -2.3025 4.8906 9 7 5.3005 -0.6596 3.9233 10 6 6.3732 -0.7611 4.9160 11 1 6.0400 -1.2020 5.8555 12 6 7.6682 -1.3863 4.3637 13 6 8.4309 -0.3368 5.1893 14 1 9.2944 0.0820 4.6726 15 8 8.7332 -0.7639 6.5191 16 6 10.0230 -1.1036 6.7796 17 6 10.4132 -1.4074 8.0759 18 6 11.7238 -1.7573 8.3373 19 6 12.6487 -1.7945 7.3103 20 6 12.2635 -1.4870 6.0185 21 6 10.9531 -1.1412 5.7510 22 6 7.1716 0.5409 5.0956 23 6 2.0193 -2.1289 2.9408 24 6 1.6153 -3.2337 3.8875 25 6 0.1225 -3.5207 3.6818 26 6 -0.1557 -3.6710 2.1833 27 6 -0.0048 -2.3110 1.4958 28 7 1.2885 -1.7251 1.8772 29 1 -0.3933 0.4417 0.7651 30 1 1.7923 -0.5138 -0.8900 31 1 1.5613 2.4679 -1.2085 32 1 1.5878 2.4585 1.2243 33 1 3.8107 0.3104 1.6070 34 1 5.3586 -0.0026 3.2121 35 1 7.7868 -1.2653 3.2870 36 1 7.8368 -2.4104 4.6966 37 1 9.6920 -1.3746 8.8791 38 1 12.0272 -1.9978 9.3456 39 1 13.6739 -2.0638 7.5175 40 1 12.9878 -1.5172 5.2178 41 1 10.6528 -0.9007 4.7418 42 1 6.9395 1.0716 6.0189 43 1 7.1553 1.1889 4.2192 44 1 2.1951 -4.1315 3.6735 45 1 1.7906 -2.9187 4.9161 46 1 -0.4660 -2.6945 4.0809 47 1 -0.1472 -4.4427 4.1970 48 1 -1.1707 -4.0409 2.0376 49 1 0.5535 -4.3770 1.7512 50 1 -0.8123 -1.6505 1.8121 51 1 -0.0420 -2.4407 0.4141 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11987230_16915396.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:45 Heat of formation + Delta-G solvation = -0.195646 kcal Electronic energy + Delta-G solvation = -32898.883167 eV Core-core repulsion = 28538.594350 eV Total energy + Delta-G solvation = -4360.288817 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.177 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.79492 -41.62386 -40.37765 -39.16262 -38.07469 -37.26178 -36.89161 -34.16522 -33.44835 -31.92115 -31.17273 -30.64521 -29.51582 -26.86467 -26.77412 -25.97838 -24.65257 -24.06043 -23.39084 -22.94618 -21.73293 -21.18228 -20.71446 -19.70337 -19.22384 -18.80450 -17.49365 -17.20751 -17.05440 -16.99468 -16.69879 -16.59833 -16.07882 -15.95853 -15.66819 -15.47046 -15.33987 -15.27768 -15.18476 -15.11145 -14.71117 -14.58222 -14.37067 -14.31044 -13.91703 -13.89834 -13.51765 -13.44272 -13.20046 -13.10638 -12.71914 -12.51177 -12.46529 -12.41163 -12.17110 -12.04572 -12.02466 -11.86895 -11.77450 -11.42080 -11.29425 -10.89549 -10.86925 -10.05580 -9.95065 -9.56097 -9.16081 -9.04729 -4.89641 0.39269 0.48428 0.71016 1.07018 1.45069 1.69305 1.79181 2.05013 2.13060 2.44303 2.53197 2.83763 3.22136 3.39845 3.46722 3.48879 3.55789 3.66358 3.76263 3.79150 3.79956 3.88877 3.94942 4.06203 4.13009 4.23828 4.28207 4.33543 4.34823 4.36973 4.50328 4.52909 4.57903 4.62152 4.69565 4.70803 4.73664 4.75669 4.78341 4.80764 4.89757 4.92768 4.98753 4.99577 5.06305 5.09671 5.17065 5.20366 5.36746 5.48937 5.59503 5.61510 5.73852 5.88264 6.02505 6.21005 6.35704 6.48831 6.71679 7.38980 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.057 4.057 3 Si 0.805 3.195 4 C -0.018 4.018 5 C -0.158 4.158 6 C -0.255 4.255 7 C 0.588 3.412 8 O -0.594 6.594 9 N -0.701 5.701 10 C 0.124 3.876 11 H 0.083 0.917 12 C -0.163 4.163 13 C 0.052 3.948 14 H 0.115 0.885 15 O -0.314 6.314 16 C 0.111 3.889 17 C -0.175 4.175 18 C -0.088 4.088 19 C -0.168 4.168 20 C -0.087 4.087 21 C -0.215 4.215 22 C -0.124 4.124 23 C 0.100 3.900 24 C -0.054 4.054 25 C -0.124 4.124 26 C -0.134 4.134 27 C 0.105 3.895 28 N -0.429 5.429 29 H 0.384 0.616 30 H 0.131 0.869 31 H -0.298 1.298 32 H -0.292 1.292 33 H 0.187 0.813 34 H 0.418 0.582 35 H 0.124 0.876 36 H 0.056 0.944 37 H 0.128 0.872 38 H 0.145 0.855 39 H 0.142 0.858 40 H 0.146 0.854 41 H 0.147 0.853 42 H 0.080 0.920 43 H 0.141 0.859 44 H 0.078 0.922 45 H 0.078 0.922 46 H 0.068 0.932 47 H 0.088 0.912 48 H 0.108 0.892 49 H 0.068 0.932 50 H 0.093 0.907 51 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.535 3.130 -5.323 6.363 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.165 4.165 3 Si 0.708 3.292 4 C -0.126 4.126 5 C -0.182 4.182 6 C -0.265 4.265 7 C 0.378 3.622 8 O -0.476 6.476 9 N -0.352 5.352 10 C 0.019 3.981 11 H 0.101 0.899 12 C -0.201 4.201 13 C -0.004 4.004 14 H 0.133 0.867 15 O -0.228 6.228 16 C 0.066 3.934 17 C -0.194 4.194 18 C -0.106 4.106 19 C -0.186 4.186 20 C -0.105 4.105 21 C -0.233 4.233 22 C -0.162 4.162 23 C -0.018 4.018 24 C -0.092 4.092 25 C -0.161 4.161 26 C -0.172 4.172 27 C -0.015 4.015 28 N -0.105 5.105 29 H 0.234 0.766 30 H 0.148 0.852 31 H -0.225 1.225 32 H -0.218 1.218 33 H 0.204 0.796 34 H 0.256 0.744 35 H 0.142 0.858 36 H 0.075 0.925 37 H 0.146 0.854 38 H 0.163 0.837 39 H 0.159 0.841 40 H 0.164 0.836 41 H 0.165 0.835 42 H 0.099 0.901 43 H 0.159 0.841 44 H 0.096 0.904 45 H 0.097 0.903 46 H 0.087 0.913 47 H 0.106 0.894 48 H 0.126 0.874 49 H 0.087 0.913 50 H 0.111 0.889 51 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 0.840 2.963 -5.271 6.105 hybrid contribution -1.133 -0.257 0.446 1.244 sum -0.293 2.707 -4.824 5.540 Atomic orbital electron populations 1.86566 1.18330 1.80112 1.50299 1.25078 0.83345 1.11871 0.96196 0.93514 0.89776 0.69721 0.76166 1.21016 0.96371 0.95500 0.99755 1.22024 0.98518 1.02376 0.95250 1.19978 0.97964 1.06057 1.02498 1.17658 0.81528 0.79837 0.83156 1.90749 1.80163 1.38840 1.37852 1.45561 1.19799 1.38358 1.31497 1.22430 0.85317 0.98027 0.92327 0.89874 1.24063 0.95265 0.98959 1.01862 1.23358 0.98802 0.96785 0.81482 0.86742 1.86070 1.24544 1.80326 1.31902 1.19267 0.83474 0.96062 0.94548 1.20700 0.97727 1.06262 0.94700 1.21281 0.91851 0.96788 1.00649 1.21435 1.00837 1.03234 0.93091 1.21332 0.95530 0.96009 0.97646 1.21523 0.94463 1.07791 0.99516 1.23610 0.91477 0.95897 1.05230 1.20544 0.91922 0.98286 0.91054 1.20418 0.96921 0.94673 0.97182 1.21691 0.94427 1.03405 0.96591 1.21925 1.04587 0.95538 0.95139 1.22252 0.82199 0.95389 1.01656 1.44034 1.17975 1.27317 1.21177 0.76640 0.85178 1.22548 1.21839 0.79559 0.74434 0.85804 0.92495 0.85404 0.83690 0.84056 0.83615 0.83506 0.90124 0.84092 0.90375 0.90324 0.91346 0.89366 0.87413 0.91328 0.88928 0.88288 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.13 10.68 -148.98 -1.59 -0.47 16 2 C -0.06 0.22 2.99 71.23 0.21 0.44 16 3 Si 0.81 -4.48 31.10 68.60 2.13 -2.34 16 4 C -0.02 0.01 6.15 40.99 0.25 0.26 16 5 C -0.16 0.20 9.08 23.64 0.21 0.41 16 6 C -0.26 -1.47 6.28 -19.12 -0.12 -1.59 16 7 C 0.59 5.16 7.81 86.62 0.68 5.83 16 8 O -0.59 -10.26 14.94 -4.13 -0.06 -10.32 16 9 N -0.70 -0.60 5.35 -443.01 -2.37 -2.97 16 10 C 0.12 0.28 4.18 45.61 0.19 0.47 16 11 H 0.08 0.84 7.46 -2.39 -0.02 0.83 16 12 C -0.16 0.02 7.73 31.21 0.24 0.26 16 13 C 0.05 -0.05 3.74 31.12 0.12 0.07 16 14 H 0.12 -0.59 5.96 -2.39 -0.01 -0.60 16 15 O -0.31 -2.04 10.06 -92.44 -0.93 -2.97 16 16 C 0.11 0.71 6.68 22.51 0.15 0.86 16 17 C -0.18 -1.08 9.99 22.37 0.22 -0.86 16 18 C -0.09 -0.27 10.04 22.25 0.22 -0.05 16 19 C -0.17 -0.28 10.04 22.28 0.22 -0.06 16 20 C -0.09 -0.11 10.04 22.25 0.22 0.12 16 21 C -0.21 -0.55 9.01 22.37 0.20 -0.35 16 22 C -0.12 0.47 7.66 31.12 0.24 0.71 16 23 C 0.10 0.59 6.57 41.69 0.27 0.87 16 24 C -0.05 -0.29 5.32 30.08 0.16 -0.13 16 25 C -0.12 0.09 5.98 30.78 0.18 0.27 16 26 C -0.13 0.45 5.92 30.69 0.18 0.63 16 27 C 0.10 -0.26 5.32 86.33 0.46 0.20 16 28 N -0.43 -0.73 3.11 -493.60 -1.54 -2.27 16 29 H 0.38 -2.36 8.64 -74.06 -0.64 -3.00 16 30 H 0.13 -0.74 7.96 -2.39 -0.02 -0.76 16 31 H -0.30 -0.51 7.11 99.48 0.71 0.19 16 32 H -0.29 -0.13 7.11 99.48 0.71 0.58 16 33 H 0.19 -1.83 6.51 -2.91 -0.02 -1.85 16 34 H 0.42 -2.81 7.86 -92.71 -0.73 -3.54 16 35 H 0.12 -0.66 8.14 -2.39 -0.02 -0.68 16 36 H 0.06 0.30 8.14 -2.39 -0.02 0.28 16 37 H 0.13 0.67 8.06 -2.91 -0.02 0.65 16 38 H 0.15 -0.19 8.06 -2.91 -0.02 -0.21 16 39 H 0.14 -0.36 8.06 -2.91 -0.02 -0.38 16 40 H 0.15 -0.54 8.06 -2.91 -0.02 -0.56 16 41 H 0.15 -0.32 5.92 -2.91 -0.02 -0.33 16 42 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 43 H 0.14 -1.55 8.12 -2.39 -0.02 -1.57 16 44 H 0.08 0.52 8.14 -2.39 -0.02 0.50 16 45 H 0.08 0.73 7.40 -2.39 -0.02 0.71 16 46 H 0.07 -0.04 8.12 -2.39 -0.02 -0.06 16 47 H 0.09 -0.22 8.14 -2.39 -0.02 -0.23 16 48 H 0.11 -0.75 8.14 -2.38 -0.02 -0.77 16 49 H 0.07 -0.11 8.11 -2.39 -0.02 -0.13 16 50 H 0.09 -0.42 7.94 -2.39 -0.02 -0.44 16 51 H 0.10 -0.27 7.69 -2.38 -0.02 -0.29 16 Total: 0.00 -24.61 408.78 -0.19 -24.80 By element: Atomic # 1 Polarization: -11.45 SS G_CDS: -0.36 Total: -11.82 kcal Atomic # 6 Polarization: 3.84 SS G_CDS: 4.53 Total: 8.36 kcal Atomic # 7 Polarization: -1.34 SS G_CDS: -3.91 Total: -5.24 kcal Atomic # 8 Polarization: -11.18 SS G_CDS: -2.58 Total: -13.76 kcal Atomic # 14 Polarization: -4.48 SS G_CDS: 2.13 Total: -2.34 kcal Total: -24.61 -0.19 -24.80 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_16915396.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.606 kcal (2) G-P(sol) polarization free energy of solvation -24.608 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.002 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.193 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.801 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.196 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds