Wall clock time and date at job start Tue Mar 9 2021 12:59:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86304 * 109.46965 * 2 1 4 4 C 1.50699 * 109.46612 * 240.00311 * 2 1 3 5 5 C 1.38274 * 119.94379 * 119.72868 * 4 2 1 6 6 C 1.38142 * 120.05523 * 179.72415 * 5 4 2 7 7 C 1.38735 * 119.94189 * 0.54320 * 6 5 4 8 8 O 1.35897 * 120.05038 * 179.74938 * 7 6 5 9 9 C 1.42905 * 117.00599 * 359.97438 * 8 7 6 10 10 F 1.39906 * 109.46629 * 299.99731 * 9 8 7 11 11 F 1.39894 * 109.47041 * 59.99444 * 9 8 7 12 12 C 1.50699 * 109.47053 * 180.02562 * 9 8 7 13 13 O 1.21282 * 120.00347 * 359.97438 * 12 9 8 14 14 N 1.34780 * 119.99510 * 179.97438 * 12 9 8 15 15 C 1.46502 * 119.99890 * 179.97438 * 14 12 9 16 16 H 1.08999 * 112.84517 * 25.33290 * 15 14 12 17 17 C 1.53779 * 113.61402 * 156.53020 * 15 14 12 18 18 C 1.53779 * 87.08284 * 139.98305 * 17 15 14 19 19 H 1.09000 * 113.61688 * 220.02136 * 18 17 15 20 20 O 1.42899 * 113.61601 * 89.19555 * 18 17 15 21 21 C 1.35900 * 116.99700 * 156.68587 * 20 18 17 22 22 C 1.38728 * 120.06033 * 5.43554 * 21 20 18 23 23 C 1.38145 * 119.94727 * 179.69711 * 22 21 20 24 24 C 1.38267 * 120.05266 * 0.60142 * 23 22 21 25 25 C 1.38261 * 120.11044 * 359.67275 * 24 23 22 26 26 C 1.38136 * 120.05844 * 0.02639 * 25 24 23 27 27 C 1.53777 * 113.61354 * 254.13849 * 15 14 12 28 28 C 1.38731 * 119.89059 * 359.72487 * 7 6 5 29 29 C 1.38140 * 119.94041 * 0.02562 * 28 7 6 30 30 H 0.96701 * 114.00409 * 59.99610 * 1 2 3 31 31 H 1.08996 * 109.47461 * 120.00512 * 2 1 3 32 32 H 1.48496 * 109.99786 * 60.00587 * 3 2 1 33 33 H 1.48501 * 109.99848 * 181.32000 * 3 2 1 34 34 H 1.08001 * 119.97076 * 359.97401 * 5 4 2 35 35 H 1.08003 * 120.02906 * 180.27803 * 6 5 4 36 36 H 0.96995 * 119.99945 * 359.97438 * 14 12 9 37 37 H 1.09001 * 113.61080 * 254.53094 * 17 15 14 38 38 H 1.09001 * 113.61389 * 25.34586 * 17 15 14 39 39 H 1.08006 * 120.02637 * 359.97438 * 22 21 20 40 40 H 1.08001 * 119.97191 * 180.27081 * 23 22 21 41 41 H 1.08000 * 119.94285 * 179.69742 * 24 23 22 42 42 H 1.08006 * 119.96796 * 180.02562 * 25 24 23 43 43 H 1.08002 * 120.03046 * 180.02562 * 26 25 24 44 44 H 1.09004 * 113.61565 * 334.56220 * 27 15 14 45 45 H 1.08998 * 113.61942 * 105.47152 * 27 15 14 46 46 H 1.07996 * 120.02536 * 180.02562 * 28 7 6 47 47 H 1.08007 * 119.97095 * 179.97438 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.7214 -0.0356 -2.1428 6 6 3.1877 -0.6862 -3.2687 7 6 2.8532 -2.0144 -3.4894 8 8 3.3066 -2.6550 -4.5988 9 6 4.1229 -1.8997 -5.4962 10 9 3.4015 -0.7974 -5.9672 11 9 5.2670 -1.4560 -4.8246 12 6 4.5277 -2.7686 -6.6592 13 8 4.1543 -3.9212 -6.7139 14 7 5.3046 -2.2646 -7.6384 15 6 5.6986 -3.1093 -8.7687 16 1 4.9980 -3.9237 -8.9528 17 6 6.0655 -2.3147 -10.0331 18 6 7.2100 -3.3211 -10.2383 19 1 8.1371 -2.8636 -10.5837 20 8 6.8352 -4.4650 -11.0082 21 6 7.8328 -5.1359 -11.6420 22 6 9.1554 -4.7718 -11.4357 23 6 10.1680 -5.4593 -12.0763 24 6 9.8634 -6.5017 -12.9322 25 6 8.5457 -6.8629 -13.1439 26 6 7.5299 -6.1825 -12.5009 27 6 7.1679 -3.5603 -8.7179 28 6 2.0557 -2.6875 -2.5754 29 6 1.5962 -2.0339 -1.4485 30 1 -0.3934 0.4417 -0.7650 31 1 1.7924 -0.5139 0.8899 32 1 1.5615 2.4678 1.2085 33 1 3.5345 1.7703 -0.0321 34 1 2.9775 0.9997 -1.9729 35 1 3.8086 -0.1600 -3.9787 36 1 5.6029 -1.3427 -7.5948 37 1 5.3032 -2.3558 -10.8111 38 1 6.4062 -1.2999 -9.8275 39 1 9.3936 -3.9542 -10.7713 40 1 11.1980 -5.1790 -11.9126 41 1 10.6561 -7.0349 -13.4358 42 1 8.3104 -7.6778 -13.8126 43 1 6.5008 -6.4653 -12.6663 44 1 7.8120 -2.8871 -8.1521 45 1 7.2944 -4.6055 -8.4358 46 1 1.7943 -3.7216 -2.7448 47 1 0.9749 -2.5574 -0.7368 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_4549640.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:31 Heat of formation + Delta-G solvation = -136.445448 kcal Electronic energy + Delta-G solvation = -35351.655354 eV Core-core repulsion = 30104.369307 eV Total energy + Delta-G solvation = -5247.286046 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.131 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -50.83092 -48.80654 -41.94184 -41.32811 -40.88377 -39.59176 -39.13035 -37.51898 -37.22061 -34.73451 -32.41791 -32.00491 -31.95864 -30.71604 -29.20918 -27.14390 -26.65274 -25.85902 -24.46362 -23.58204 -23.38013 -22.69583 -22.29099 -21.14102 -20.52404 -19.84679 -19.61873 -19.25515 -18.53604 -17.83821 -17.45551 -17.22379 -17.05480 -16.78925 -16.70718 -16.37980 -16.19866 -16.07963 -15.79035 -15.72742 -15.44901 -15.39307 -15.38091 -15.26051 -15.05285 -15.04445 -14.43252 -14.36831 -14.29408 -14.16103 -14.07722 -13.87803 -13.68132 -13.58461 -13.48159 -12.97723 -12.72825 -12.55217 -12.35480 -12.21689 -12.12163 -11.83678 -11.66313 -11.57524 -11.42067 -10.57188 -10.49518 -10.15929 -9.98233 -9.51930 -9.20179 -5.08290 0.07236 0.18595 0.35925 0.45974 0.50382 0.70077 1.24802 1.58413 1.75398 1.93248 1.93578 2.02576 2.49860 2.72604 2.79634 3.06674 3.15780 3.29425 3.40801 3.44087 3.53968 3.65786 3.66888 3.74479 3.79377 3.89368 4.03189 4.10305 4.21761 4.22612 4.28101 4.36549 4.40799 4.43194 4.46670 4.50605 4.53890 4.59886 4.72766 4.74203 4.82325 4.93682 5.00946 5.03822 5.07882 5.31120 5.37051 5.41248 5.44249 5.58420 5.75562 5.78944 5.88753 6.38133 6.39910 6.53426 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.065 4.065 3 Si 0.686 3.314 4 C -0.142 4.142 5 C -0.078 4.078 6 C -0.186 4.186 7 C 0.106 3.894 8 O -0.286 6.286 9 C 0.431 3.569 10 F -0.174 7.174 11 F -0.175 7.175 12 C 0.517 3.483 13 O -0.465 6.465 14 N -0.696 5.696 15 C 0.127 3.873 16 H 0.129 0.871 17 C -0.138 4.138 18 C 0.059 3.941 19 H 0.099 0.901 20 O -0.293 6.293 21 C 0.127 3.873 22 C -0.209 4.209 23 C -0.081 4.081 24 C -0.157 4.157 25 C -0.080 4.080 26 C -0.151 4.151 27 C -0.170 4.170 28 C -0.126 4.126 29 C -0.056 4.056 30 H 0.380 0.620 31 H 0.116 0.884 32 H -0.253 1.253 33 H -0.257 1.257 34 H 0.134 0.866 35 H 0.136 0.864 36 H 0.410 0.590 37 H 0.095 0.905 38 H 0.109 0.891 39 H 0.129 0.871 40 H 0.125 0.875 41 H 0.125 0.875 42 H 0.131 0.869 43 H 0.131 0.869 44 H 0.103 0.897 45 H 0.088 0.912 46 H 0.141 0.859 47 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.747 4.098 -3.854 6.260 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.176 4.176 3 Si 0.588 3.412 4 C -0.143 4.143 5 C -0.095 4.095 6 C -0.205 4.205 7 C 0.063 3.937 8 O -0.202 6.202 9 C 0.354 3.646 10 F -0.155 7.155 11 F -0.156 7.156 12 C 0.295 3.705 13 O -0.335 6.335 14 N -0.349 5.349 15 C 0.024 3.976 16 H 0.147 0.853 17 C -0.176 4.176 18 C 0.002 3.998 19 H 0.117 0.883 20 O -0.206 6.206 21 C 0.083 3.917 22 C -0.227 4.227 23 C -0.099 4.099 24 C -0.175 4.175 25 C -0.098 4.098 26 C -0.169 4.169 27 C -0.209 4.209 28 C -0.144 4.144 29 C -0.074 4.074 30 H 0.227 0.773 31 H 0.133 0.867 32 H -0.178 1.178 33 H -0.182 1.182 34 H 0.151 0.849 35 H 0.154 0.846 36 H 0.246 0.754 37 H 0.114 0.886 38 H 0.127 0.873 39 H 0.147 0.853 40 H 0.143 0.857 41 H 0.143 0.857 42 H 0.148 0.852 43 H 0.149 0.851 44 H 0.121 0.879 45 H 0.107 0.893 46 H 0.159 0.841 47 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 2.795 3.328 -2.956 5.256 hybrid contribution 0.643 0.337 0.321 0.794 sum 3.437 3.665 -2.635 5.674 Atomic orbital electron populations 1.86507 1.16996 1.81681 1.49310 1.25007 0.85302 1.09996 0.97265 0.94769 0.80998 0.78097 0.87344 1.20376 1.00670 0.95502 0.97750 1.20803 0.96384 0.99323 0.93025 1.21465 1.04595 0.93575 1.00859 1.18987 0.96425 0.91763 0.86479 1.86676 1.63454 1.38354 1.31745 1.21850 0.76770 0.79465 0.86563 1.93195 1.78175 1.55653 1.88525 1.93191 1.50945 1.89874 1.81638 1.19363 0.80766 0.87677 0.82715 1.90887 1.51821 1.15670 1.75079 1.45828 1.50603 1.16475 1.22006 1.22838 0.96526 0.94471 0.83770 0.85290 1.23595 0.98490 0.98203 0.97293 1.23128 0.99196 0.86398 0.91088 0.88284 1.86083 1.32873 1.40264 1.61412 1.19005 0.87011 0.92901 0.92831 1.21270 0.92092 1.03869 1.05478 1.21000 0.98952 0.94745 0.95168 1.21145 0.96747 0.98981 1.00624 1.21035 0.92281 0.98536 0.97956 1.20499 1.00669 0.96886 0.98886 1.24089 0.96767 1.04284 0.95763 1.20543 0.99096 1.01263 0.93537 1.20890 0.97128 0.93479 0.95873 0.77287 0.86712 1.17775 1.18239 0.84875 0.84637 0.75371 0.88642 0.87291 0.85305 0.85668 0.85727 0.85159 0.85073 0.87874 0.89323 0.84125 0.84218 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.01 12.77 -35.23 -0.45 -0.46 16 2 C -0.06 0.02 2.82 36.01 0.10 0.13 16 3 Si 0.69 -0.79 29.78 -169.99 -5.06 -5.85 16 4 C -0.14 -0.04 5.39 -104.60 -0.56 -0.61 16 5 C -0.08 -0.01 8.66 -39.60 -0.34 -0.35 16 6 C -0.19 -0.25 8.26 -39.43 -0.33 -0.58 16 7 C 0.11 0.28 6.48 -39.22 -0.25 0.02 16 8 O -0.29 -1.02 9.60 -39.33 -0.38 -1.40 16 9 C 0.43 0.65 2.05 36.01 0.07 0.72 16 10 F -0.17 -0.11 15.29 2.25 0.03 -0.07 16 11 F -0.18 -0.15 15.29 2.25 0.03 -0.11 16 12 C 0.52 0.85 7.34 -10.98 -0.08 0.76 16 13 O -0.46 -2.43 16.12 -14.35 -0.23 -2.66 16 14 N -0.70 1.27 5.36 -53.02 -0.28 0.98 16 15 C 0.13 -0.21 4.15 -67.12 -0.28 -0.49 16 16 H 0.13 0.06 7.50 -51.93 -0.39 -0.33 16 17 C -0.14 0.49 7.66 -25.92 -0.20 0.29 16 18 C 0.06 -0.12 3.75 -25.82 -0.10 -0.22 16 19 H 0.10 -0.33 5.95 -51.93 -0.31 -0.64 16 20 O -0.29 -0.27 10.07 -19.43 -0.20 -0.47 16 21 C 0.13 0.18 6.68 -39.22 -0.26 -0.08 16 22 C -0.21 -0.06 9.02 -39.43 -0.36 -0.42 16 23 C -0.08 -0.01 10.04 -39.60 -0.40 -0.41 16 24 C -0.16 -0.03 10.04 -39.56 -0.40 -0.43 16 25 C -0.08 -0.03 10.04 -39.61 -0.40 -0.43 16 26 C -0.15 -0.19 9.99 -39.43 -0.39 -0.58 16 27 C -0.17 0.37 7.72 -25.83 -0.20 0.17 16 28 C -0.13 -0.20 9.99 -39.44 -0.39 -0.60 16 29 C -0.06 -0.04 9.60 -39.61 -0.38 -0.42 16 30 H 0.38 -1.42 8.70 45.56 0.40 -1.03 16 31 H 0.12 -0.01 7.96 -51.93 -0.41 -0.42 16 32 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 33 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 34 H 0.13 -0.26 4.87 -52.49 -0.26 -0.51 16 35 H 0.14 0.05 5.10 -52.48 -0.27 -0.21 16 36 H 0.41 -1.91 8.71 -40.82 -0.36 -2.26 16 37 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 38 H 0.11 -0.64 8.11 -51.93 -0.42 -1.06 16 39 H 0.13 -0.22 5.91 -52.48 -0.31 -0.53 16 40 H 0.13 -0.23 8.06 -52.49 -0.42 -0.65 16 41 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 42 H 0.13 -0.21 8.06 -52.48 -0.42 -0.63 16 43 H 0.13 0.04 8.06 -52.49 -0.42 -0.38 16 44 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 45 H 0.09 -0.04 8.14 -51.93 -0.42 -0.46 16 46 H 0.14 0.08 8.06 -52.49 -0.42 -0.35 16 47 H 0.14 -0.06 8.06 -52.48 -0.42 -0.48 16 LS Contribution 403.78 15.07 6.08 6.08 Total: 0.00 -8.64 403.78 -10.92 -19.56 By element: Atomic # 1 Polarization: -6.77 SS G_CDS: -5.33 Total: -12.10 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -5.14 Total: -3.51 kcal Atomic # 7 Polarization: 1.27 SS G_CDS: -0.28 Total: 0.98 kcal Atomic # 8 Polarization: -3.72 SS G_CDS: -1.25 Total: -4.98 kcal Atomic # 9 Polarization: -0.25 SS G_CDS: 0.07 Total: -0.19 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: -5.06 Total: -5.85 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -8.64 -10.92 -19.56 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_4549640.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -116.886 kcal (2) G-P(sol) polarization free energy of solvation -8.639 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.525 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.920 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.559 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.445 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds