Wall clock time and date at job start Tue Mar 9 2021 12:59:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86304 * 109.46965 * 2 1 4 4 C 1.50699 * 109.46612 * 240.00311 * 2 1 3 5 5 C 1.38274 * 119.94379 * 119.72868 * 4 2 1 6 6 C 1.38142 * 120.05523 * 179.72415 * 5 4 2 7 7 C 1.38735 * 119.94189 * 0.54320 * 6 5 4 8 8 O 1.35897 * 120.05038 * 179.74938 * 7 6 5 9 9 C 1.42905 * 117.00599 * 359.97438 * 8 7 6 10 10 F 1.39906 * 109.46629 * 299.99731 * 9 8 7 11 11 F 1.39894 * 109.47041 * 59.99444 * 9 8 7 12 12 C 1.50699 * 109.47053 * 180.02562 * 9 8 7 13 13 O 1.21282 * 120.00347 * 359.97438 * 12 9 8 14 14 N 1.34780 * 119.99510 * 179.97438 * 12 9 8 15 15 C 1.46502 * 119.99890 * 179.97438 * 14 12 9 16 16 H 1.08999 * 112.84517 * 25.33290 * 15 14 12 17 17 C 1.53779 * 113.61402 * 156.53020 * 15 14 12 18 18 C 1.53779 * 87.08284 * 139.98305 * 17 15 14 19 19 H 1.09000 * 113.61688 * 220.02136 * 18 17 15 20 20 O 1.42899 * 113.61601 * 89.19555 * 18 17 15 21 21 C 1.35900 * 116.99700 * 156.68587 * 20 18 17 22 22 C 1.38728 * 120.06033 * 5.43554 * 21 20 18 23 23 C 1.38145 * 119.94727 * 179.69711 * 22 21 20 24 24 C 1.38267 * 120.05266 * 0.60142 * 23 22 21 25 25 C 1.38261 * 120.11044 * 359.67275 * 24 23 22 26 26 C 1.38136 * 120.05844 * 0.02639 * 25 24 23 27 27 C 1.53777 * 113.61354 * 254.13849 * 15 14 12 28 28 C 1.38731 * 119.89059 * 359.72487 * 7 6 5 29 29 C 1.38140 * 119.94041 * 0.02562 * 28 7 6 30 30 H 0.96701 * 114.00409 * 59.99610 * 1 2 3 31 31 H 1.08996 * 109.47461 * 120.00512 * 2 1 3 32 32 H 1.48496 * 109.99786 * 60.00587 * 3 2 1 33 33 H 1.48501 * 109.99848 * 181.32000 * 3 2 1 34 34 H 1.08001 * 119.97076 * 359.97401 * 5 4 2 35 35 H 1.08003 * 120.02906 * 180.27803 * 6 5 4 36 36 H 0.96995 * 119.99945 * 359.97438 * 14 12 9 37 37 H 1.09001 * 113.61080 * 254.53094 * 17 15 14 38 38 H 1.09001 * 113.61389 * 25.34586 * 17 15 14 39 39 H 1.08006 * 120.02637 * 359.97438 * 22 21 20 40 40 H 1.08001 * 119.97191 * 180.27081 * 23 22 21 41 41 H 1.08000 * 119.94285 * 179.69742 * 24 23 22 42 42 H 1.08006 * 119.96796 * 180.02562 * 25 24 23 43 43 H 1.08002 * 120.03046 * 180.02562 * 26 25 24 44 44 H 1.09004 * 113.61565 * 334.56220 * 27 15 14 45 45 H 1.08998 * 113.61942 * 105.47152 * 27 15 14 46 46 H 1.07996 * 120.02536 * 180.02562 * 28 7 6 47 47 H 1.08007 * 119.97095 * 179.97438 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.7214 -0.0356 -2.1428 6 6 3.1877 -0.6862 -3.2687 7 6 2.8532 -2.0144 -3.4894 8 8 3.3066 -2.6550 -4.5988 9 6 4.1229 -1.8997 -5.4962 10 9 3.4015 -0.7974 -5.9672 11 9 5.2670 -1.4560 -4.8246 12 6 4.5277 -2.7686 -6.6592 13 8 4.1543 -3.9212 -6.7139 14 7 5.3046 -2.2646 -7.6384 15 6 5.6986 -3.1093 -8.7687 16 1 4.9980 -3.9237 -8.9528 17 6 6.0655 -2.3147 -10.0331 18 6 7.2100 -3.3211 -10.2383 19 1 8.1371 -2.8636 -10.5837 20 8 6.8352 -4.4650 -11.0082 21 6 7.8328 -5.1359 -11.6420 22 6 9.1554 -4.7718 -11.4357 23 6 10.1680 -5.4593 -12.0763 24 6 9.8634 -6.5017 -12.9322 25 6 8.5457 -6.8629 -13.1439 26 6 7.5299 -6.1825 -12.5009 27 6 7.1679 -3.5603 -8.7179 28 6 2.0557 -2.6875 -2.5754 29 6 1.5962 -2.0339 -1.4485 30 1 -0.3934 0.4417 -0.7650 31 1 1.7924 -0.5139 0.8899 32 1 1.5615 2.4678 1.2085 33 1 3.5345 1.7703 -0.0321 34 1 2.9775 0.9997 -1.9729 35 1 3.8086 -0.1600 -3.9787 36 1 5.6029 -1.3427 -7.5948 37 1 5.3032 -2.3558 -10.8111 38 1 6.4062 -1.2999 -9.8275 39 1 9.3936 -3.9542 -10.7713 40 1 11.1980 -5.1790 -11.9126 41 1 10.6561 -7.0349 -13.4358 42 1 8.3104 -7.6778 -13.8126 43 1 6.5008 -6.4653 -12.6663 44 1 7.8120 -2.8871 -8.1521 45 1 7.2944 -4.6055 -8.4358 46 1 1.7943 -3.7216 -2.7448 47 1 0.9749 -2.5574 -0.7368 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11987230_4549640.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:29 Heat of formation + Delta-G solvation = -133.636963 kcal Electronic energy + Delta-G solvation = -35351.533569 eV Core-core repulsion = 30104.369307 eV Total energy + Delta-G solvation = -5247.164261 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.131 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -50.91903 -48.88490 -41.89664 -41.40615 -40.94382 -39.57928 -39.18345 -37.50011 -37.22959 -34.74936 -32.46515 -32.03894 -31.94335 -30.69329 -29.27895 -26.93939 -26.63844 -25.83385 -24.49873 -23.56703 -23.35032 -22.73665 -22.36186 -21.07636 -20.59190 -19.86193 -19.71700 -19.20471 -18.54826 -17.86459 -17.48374 -17.12660 -17.06911 -16.78274 -16.71737 -16.45225 -16.21184 -16.06449 -15.83697 -15.74813 -15.46553 -15.41996 -15.37082 -15.33967 -15.12986 -15.09430 -14.44139 -14.38321 -14.36979 -14.24090 -14.01787 -13.74345 -13.61393 -13.52985 -13.35011 -13.04251 -12.66665 -12.49519 -12.40348 -12.15409 -12.13221 -11.89652 -11.65589 -11.52224 -11.35802 -10.54186 -10.47592 -10.20911 -9.97312 -9.59705 -9.19386 -5.01199 -0.00089 0.13889 0.37128 0.43500 0.45863 0.58387 1.29924 1.61943 1.64505 1.95427 1.97030 2.06067 2.44404 2.74279 2.81145 3.18353 3.22455 3.34947 3.47871 3.53204 3.58996 3.64099 3.73608 3.83952 3.88085 3.97546 4.07686 4.14065 4.19294 4.30800 4.38584 4.43210 4.49200 4.50329 4.57807 4.59596 4.64587 4.72125 4.80971 4.81813 4.88481 4.90660 5.02570 5.06430 5.15022 5.32879 5.33511 5.36819 5.47008 5.59930 5.78646 5.83181 5.85113 6.42889 6.44467 6.76462 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.070 4.070 3 Si 0.772 3.228 4 C -0.141 4.141 5 C -0.077 4.077 6 C -0.192 4.192 7 C 0.085 3.915 8 O -0.307 6.307 9 C 0.436 3.564 10 F -0.168 7.168 11 F -0.170 7.170 12 C 0.516 3.484 13 O -0.511 6.511 14 N -0.673 5.673 15 C 0.118 3.882 16 H 0.101 0.899 17 C -0.121 4.121 18 C 0.052 3.948 19 H 0.118 0.882 20 O -0.312 6.312 21 C 0.112 3.888 22 C -0.214 4.214 23 C -0.088 4.088 24 C -0.168 4.168 25 C -0.088 4.088 26 C -0.173 4.173 27 C -0.164 4.164 28 C -0.137 4.137 29 C -0.058 4.058 30 H 0.396 0.604 31 H 0.111 0.889 32 H -0.297 1.297 33 H -0.284 1.284 34 H 0.155 0.845 35 H 0.144 0.856 36 H 0.427 0.573 37 H 0.090 0.910 38 H 0.143 0.857 39 H 0.148 0.852 40 H 0.145 0.855 41 H 0.140 0.860 42 H 0.145 0.855 43 H 0.130 0.870 44 H 0.127 0.873 45 H 0.066 0.934 46 H 0.143 0.857 47 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.785 5.958 -4.073 8.149 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.180 4.180 3 Si 0.678 3.322 4 C -0.142 4.142 5 C -0.094 4.094 6 C -0.210 4.210 7 C 0.042 3.958 8 O -0.224 6.224 9 C 0.358 3.642 10 F -0.149 7.149 11 F -0.152 7.152 12 C 0.294 3.706 13 O -0.384 6.384 14 N -0.326 5.326 15 C 0.015 3.985 16 H 0.119 0.881 17 C -0.159 4.159 18 C -0.005 4.005 19 H 0.136 0.864 20 O -0.226 6.226 21 C 0.067 3.933 22 C -0.233 4.233 23 C -0.106 4.106 24 C -0.186 4.186 25 C -0.106 4.106 26 C -0.192 4.192 27 C -0.203 4.203 28 C -0.155 4.155 29 C -0.076 4.076 30 H 0.246 0.754 31 H 0.129 0.871 32 H -0.225 1.225 33 H -0.211 1.211 34 H 0.172 0.828 35 H 0.161 0.839 36 H 0.266 0.734 37 H 0.109 0.891 38 H 0.161 0.839 39 H 0.166 0.834 40 H 0.163 0.837 41 H 0.158 0.842 42 H 0.163 0.837 43 H 0.148 0.852 44 H 0.145 0.855 45 H 0.085 0.915 46 H 0.161 0.839 47 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 3.838 5.217 -3.214 7.230 hybrid contribution 0.313 -0.226 0.434 0.581 sum 4.151 4.991 -2.780 7.062 Atomic orbital electron populations 1.86473 1.17060 1.82145 1.50539 1.25137 0.85377 1.10685 0.96756 0.93770 0.77919 0.75424 0.85038 1.20503 1.00388 0.95376 0.97921 1.21036 0.95767 1.00256 0.92383 1.21616 1.04774 0.93178 1.01469 1.19250 0.97339 0.92544 0.86660 1.86651 1.63974 1.39410 1.32355 1.21728 0.76742 0.79475 0.86258 1.93202 1.78080 1.55238 1.88409 1.93195 1.50629 1.89785 1.81565 1.19511 0.80803 0.87161 0.83135 1.90867 1.53889 1.17515 1.76152 1.45755 1.48928 1.17168 1.20790 1.22850 0.96359 0.94596 0.84733 0.88092 1.23628 0.97647 0.99176 0.95453 1.23356 1.00597 0.85944 0.90600 0.86424 1.86065 1.33427 1.41334 1.61771 1.19215 0.87697 0.93222 0.93141 1.21520 0.91626 1.04423 1.05701 1.21330 0.99940 0.94546 0.94819 1.21437 0.97056 0.99263 1.00817 1.21283 0.92386 0.98863 0.98071 1.20705 1.01049 0.97657 0.99791 1.24099 0.96470 1.03512 0.96225 1.20697 0.99332 1.01616 0.93880 1.21038 0.97098 0.93836 0.95666 0.75409 0.87128 1.22539 1.21066 0.82759 0.83867 0.73373 0.89094 0.83913 0.83436 0.83745 0.84181 0.83725 0.85214 0.85522 0.91515 0.83925 0.83353 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.36 12.77 -148.98 -1.90 -1.54 16 2 C -0.07 0.09 2.82 71.24 0.20 0.29 16 3 Si 0.77 -2.31 29.78 68.60 2.04 -0.27 16 4 C -0.14 -0.02 5.39 -19.85 -0.11 -0.13 16 5 C -0.08 0.04 8.66 22.26 0.19 0.23 16 6 C -0.19 -0.49 8.26 22.37 0.18 -0.31 16 7 C 0.08 0.52 6.48 22.51 0.15 0.66 16 8 O -0.31 -2.64 9.60 -73.36 -0.70 -3.34 16 9 C 0.44 1.58 2.05 71.24 0.15 1.72 16 10 F -0.17 -0.19 15.29 44.97 0.69 0.50 16 11 F -0.17 -0.28 15.29 44.97 0.69 0.41 16 12 C 0.52 2.24 7.34 87.66 0.64 2.89 16 13 O -0.51 -6.56 16.12 16.00 0.26 -6.30 16 14 N -0.67 2.51 5.36 -440.04 -2.36 0.15 16 15 C 0.12 -0.33 4.15 45.52 0.19 -0.14 16 16 H 0.10 0.34 7.50 -2.39 -0.02 0.32 16 17 C -0.12 0.99 7.66 31.12 0.24 1.22 16 18 C 0.05 -0.24 3.75 31.18 0.12 -0.12 16 19 H 0.12 -0.98 5.95 -2.39 -0.01 -1.00 16 20 O -0.31 -0.92 10.07 -92.42 -0.93 -1.85 16 21 C 0.11 0.42 6.68 22.51 0.15 0.57 16 22 C -0.21 -0.09 9.02 22.36 0.20 0.11 16 23 C -0.09 0.02 10.04 22.25 0.22 0.24 16 24 C -0.17 -0.06 10.04 22.28 0.22 0.16 16 25 C -0.09 -0.13 10.04 22.25 0.22 0.09 16 26 C -0.17 -0.69 9.99 22.36 0.22 -0.47 16 27 C -0.16 0.72 7.72 31.18 0.24 0.96 16 28 C -0.14 -0.58 9.99 22.36 0.22 -0.35 16 29 C -0.06 -0.09 9.60 22.25 0.21 0.12 16 30 H 0.40 -3.37 8.70 -74.06 -0.64 -4.02 16 31 H 0.11 -0.05 7.96 -2.39 -0.02 -0.07 16 32 H -0.30 -1.36 7.11 99.48 0.71 -0.65 16 33 H -0.28 -0.42 7.11 99.48 0.71 0.29 16 34 H 0.16 -0.84 4.87 -2.91 -0.01 -0.86 16 35 H 0.14 0.04 5.10 -2.91 -0.01 0.03 16 36 H 0.43 -4.57 8.71 -92.71 -0.81 -5.38 16 37 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 38 H 0.14 -2.11 8.11 -2.39 -0.02 -2.13 16 39 H 0.15 -0.66 5.91 -2.91 -0.02 -0.68 16 40 H 0.14 -0.70 8.06 -2.91 -0.02 -0.72 16 41 H 0.14 -0.49 8.06 -2.91 -0.02 -0.52 16 42 H 0.14 -0.38 8.06 -2.91 -0.02 -0.40 16 43 H 0.13 0.38 8.06 -2.91 -0.02 0.35 16 44 H 0.13 -1.17 8.14 -2.38 -0.02 -1.19 16 45 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 46 H 0.14 0.39 8.06 -2.91 -0.02 0.37 16 47 H 0.15 -0.10 8.06 -2.91 -0.02 -0.13 16 Total: 0.00 -22.75 403.78 1.30 -21.45 By element: Atomic # 1 Polarization: -16.60 SS G_CDS: -0.35 Total: -16.96 kcal Atomic # 6 Polarization: 3.87 SS G_CDS: 3.87 Total: 7.74 kcal Atomic # 7 Polarization: 2.51 SS G_CDS: -2.36 Total: 0.15 kcal Atomic # 8 Polarization: -9.75 SS G_CDS: -3.28 Total: -13.03 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 1.38 Total: 0.91 kcal Atomic # 14 Polarization: -2.31 SS G_CDS: 2.04 Total: -0.27 kcal Total: -22.75 1.30 -21.45 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_4549640.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.185 kcal (2) G-P(sol) polarization free energy of solvation -22.753 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.939 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.302 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.452 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.637 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds