Wall clock time and date at job start Tue Mar 9 2021 13:00:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.46747 * 2 1 4 4 C 1.50701 * 109.47080 * 119.99495 * 2 1 3 5 5 C 1.34235 * 126.50440 * 255.03129 * 4 2 1 6 6 N 1.36829 * 109.94023 * 179.97438 * 5 4 2 7 7 C 1.46500 * 125.06074 * 179.97438 * 6 5 4 8 8 C 1.50696 * 109.47659 * 265.02749 * 7 6 5 9 9 O 1.21278 * 119.99772 * 359.97438 * 8 7 6 10 10 N 1.34773 * 120.00704 * 180.02562 * 8 7 6 11 11 C 1.46497 * 120.00609 * 179.97438 * 10 8 7 12 12 H 1.09003 * 112.84808 * 25.33468 * 11 10 8 13 13 C 1.53785 * 113.61697 * 156.52492 * 11 10 8 14 14 C 1.53786 * 87.07905 * 139.98227 * 13 11 10 15 15 H 1.09000 * 113.61203 * 220.02211 * 14 13 11 16 16 O 1.42895 * 113.61087 * 89.20231 * 14 13 11 17 17 C 1.35899 * 117.00037 * 156.68421 * 16 14 13 18 18 C 1.38739 * 120.05379 * 5.43147 * 17 16 14 19 19 C 1.38139 * 119.94275 * 179.74421 * 18 17 16 20 20 C 1.38271 * 120.05730 * 0.51081 * 19 18 17 21 21 C 1.38266 * 120.10832 * 359.76399 * 20 19 18 22 22 C 1.38141 * 120.05653 * 359.97438 * 21 20 19 23 23 C 1.53778 * 113.61387 * 254.13692 * 11 10 8 24 24 C 1.37685 * 109.87564 * 0.22477 * 6 5 4 25 25 C 1.39087 * 133.50783 * 180.39064 * 24 6 5 26 26 C 1.37792 * 119.77628 * 179.65096 * 25 24 6 27 27 C 1.38791 * 120.66326 * 359.75905 * 26 25 24 28 28 C 1.36658 * 120.53333 * 359.97438 * 27 26 25 29 29 C 1.39599 * 119.76304 * 0.02562 * 28 27 26 30 30 H 0.96693 * 113.99681 * 60.00928 * 1 2 3 31 31 H 1.09003 * 109.47827 * 239.99692 * 2 1 3 32 32 H 1.48499 * 110.00354 * 59.99782 * 3 2 1 33 33 H 1.48509 * 109.99669 * 181.31669 * 3 2 1 34 34 H 1.08005 * 125.02696 * 359.97438 * 5 4 2 35 35 H 1.09006 * 109.47094 * 25.02829 * 7 6 5 36 36 H 1.08999 * 109.47278 * 145.02534 * 7 6 5 37 37 H 0.97004 * 119.99635 * 359.97438 * 10 8 7 38 38 H 1.08993 * 113.61658 * 254.53632 * 13 11 10 39 39 H 1.09006 * 113.61127 * 25.35487 * 13 11 10 40 40 H 1.07999 * 120.02346 * 359.97438 * 18 17 16 41 41 H 1.08005 * 119.97336 * 180.23049 * 19 18 17 42 42 H 1.07997 * 119.94423 * 179.74604 * 20 19 18 43 43 H 1.08002 * 119.96625 * 179.97438 * 21 20 19 44 44 H 1.08002 * 120.02546 * 179.97438 * 22 21 20 45 45 H 1.09000 * 113.61499 * 334.56340 * 23 11 10 46 46 H 1.09002 * 113.61458 * 105.47174 * 23 11 10 47 47 H 1.07996 * 120.11356 * 359.41277 * 25 24 6 48 48 H 1.07999 * 119.67065 * 179.73392 * 26 25 24 49 49 H 1.08004 * 119.73168 * 180.02562 * 27 26 25 50 50 H 1.07998 * 120.11841 * 180.02562 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 2.4603 -0.1375 2.3232 6 7 2.8019 -1.0988 3.2351 7 6 3.4066 -0.8400 4.5441 8 6 4.9049 -0.9620 4.4385 9 8 5.4172 -1.2384 3.3746 10 7 5.6755 -0.7650 5.5265 11 6 7.1320 -0.8842 5.4239 12 1 7.5021 -0.6963 4.4160 13 6 7.8918 -0.1093 6.5135 14 6 8.8512 -1.3089 6.5870 15 1 9.1554 -1.5631 7.6024 16 8 9.9548 -1.2154 5.6841 17 6 11.0692 -1.9279 5.9958 18 6 11.0619 -2.7882 7.0842 19 6 12.1943 -3.5155 7.3959 20 6 13.3377 -3.3786 6.6305 21 6 13.3492 -2.5176 5.5487 22 6 12.2177 -1.7922 5.2297 23 6 7.6909 -2.1701 6.0556 24 6 2.4980 -2.3458 2.7367 25 6 2.6286 -3.6359 3.2397 26 6 2.2156 -4.7106 2.4828 27 6 1.6649 -4.5193 1.2232 28 6 1.5222 -3.2601 0.7118 29 6 1.9339 -2.1568 1.4616 30 1 -0.3932 0.4416 -0.7651 31 1 1.7925 -0.5139 -0.8899 32 1 1.5614 2.4680 1.2084 33 1 3.5346 1.7703 -0.0321 34 1 2.5961 0.9250 2.4621 35 1 3.1462 0.1664 4.8721 36 1 3.0330 -1.5656 5.2667 37 1 5.2657 -0.5443 6.3776 38 1 8.3624 0.8047 6.1516 39 1 7.3127 0.0447 7.4241 40 1 10.1705 -2.8920 7.6851 41 1 12.1880 -4.1881 8.2409 42 1 14.2232 -3.9450 6.8783 43 1 14.2437 -2.4122 4.9527 44 1 12.2274 -1.1195 4.3848 45 1 7.0572 -2.5817 6.8412 46 1 7.9997 -2.9172 5.3245 47 1 3.0559 -3.7951 4.2187 48 1 2.3218 -5.7119 2.8732 49 1 1.3457 -5.3725 0.6429 50 1 1.0924 -3.1189 -0.2688 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_9818708.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:26 Heat of formation + Delta-G solvation = 35.244418 kcal Electronic energy + Delta-G solvation = -33362.749617 eV Core-core repulsion = 28903.082934 eV Total energy + Delta-G solvation = -4459.666683 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.162 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.50205 -41.77786 -40.65344 -39.38903 -37.96011 -37.58013 -37.29549 -34.57490 -33.97799 -31.97115 -31.37809 -30.67500 -30.17920 -29.09067 -27.07566 -26.42842 -25.34961 -23.77481 -23.48088 -23.31874 -22.54353 -21.73903 -20.89874 -20.43272 -19.40922 -18.57624 -18.20001 -18.19015 -17.67398 -17.32996 -17.16969 -16.76765 -16.38291 -16.35059 -16.21051 -15.70556 -15.52781 -15.38003 -15.33008 -14.86235 -14.76259 -14.65119 -14.45105 -14.38579 -14.04491 -14.01312 -13.86504 -13.69131 -13.47770 -13.38959 -13.30014 -12.65869 -12.61175 -12.54204 -12.45956 -12.33220 -12.15953 -11.89081 -11.64678 -11.59976 -11.48000 -11.10680 -10.42962 -10.27834 -10.10220 -9.97484 -9.18598 -9.02824 -8.53943 -4.95201 0.27023 0.36679 0.47066 0.79388 1.34179 1.37901 1.42140 1.60663 1.76625 1.97217 2.05210 2.09850 2.80863 3.10018 3.14922 3.24078 3.41355 3.44703 3.56573 3.66632 3.71728 3.75901 3.79273 3.83166 3.84058 3.91540 4.06389 4.10341 4.24071 4.31905 4.31988 4.36543 4.41982 4.45887 4.47070 4.55115 4.61017 4.68294 4.70477 4.78055 4.78907 4.87426 4.90210 4.98800 5.03715 5.24634 5.25990 5.32879 5.44921 5.58918 5.64129 5.79666 5.79957 5.85187 5.88943 6.11796 6.28497 6.36120 6.40797 6.80949 6.96793 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.032 4.032 3 Si 0.681 3.319 4 C -0.150 4.150 5 C 0.064 3.936 6 N -0.466 5.466 7 C 0.091 3.909 8 C 0.491 3.509 9 O -0.511 6.511 10 N -0.720 5.720 11 C 0.130 3.870 12 H 0.121 0.879 13 C -0.140 4.140 14 C 0.059 3.941 15 H 0.096 0.904 16 O -0.293 6.293 17 C 0.128 3.872 18 C -0.209 4.209 19 C -0.080 4.080 20 C -0.157 4.157 21 C -0.080 4.080 22 C -0.151 4.151 23 C -0.170 4.170 24 C 0.110 3.890 25 C -0.127 4.127 26 C -0.096 4.096 27 C -0.145 4.145 28 C -0.063 4.063 29 C -0.085 4.085 30 H 0.378 0.622 31 H 0.071 0.929 32 H -0.254 1.254 33 H -0.255 1.255 34 H 0.162 0.838 35 H 0.122 0.878 36 H 0.120 0.880 37 H 0.403 0.597 38 H 0.090 0.910 39 H 0.106 0.894 40 H 0.129 0.871 41 H 0.125 0.875 42 H 0.125 0.875 43 H 0.131 0.869 44 H 0.131 0.869 45 H 0.099 0.901 46 H 0.083 0.917 47 H 0.115 0.885 48 H 0.126 0.874 49 H 0.124 0.876 50 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.484 1.981 3.918 4.417 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.144 4.144 3 Si 0.582 3.418 4 C -0.157 4.157 5 C -0.061 4.061 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.275 3.725 9 O -0.384 6.384 10 N -0.373 5.373 11 C 0.026 3.974 12 H 0.139 0.861 13 C -0.178 4.178 14 C 0.002 3.998 15 H 0.114 0.886 16 O -0.207 6.207 17 C 0.083 3.917 18 C -0.227 4.227 19 C -0.099 4.099 20 C -0.175 4.175 21 C -0.098 4.098 22 C -0.170 4.170 23 C -0.209 4.209 24 C 0.005 3.995 25 C -0.148 4.148 26 C -0.115 4.115 27 C -0.164 4.164 28 C -0.081 4.081 29 C -0.090 4.090 30 H 0.225 0.775 31 H 0.088 0.912 32 H -0.179 1.179 33 H -0.180 1.180 34 H 0.179 0.821 35 H 0.140 0.860 36 H 0.138 0.862 37 H 0.237 0.763 38 H 0.109 0.891 39 H 0.124 0.876 40 H 0.146 0.854 41 H 0.143 0.857 42 H 0.143 0.857 43 H 0.148 0.852 44 H 0.149 0.851 45 H 0.117 0.883 46 H 0.102 0.898 47 H 0.133 0.867 48 H 0.144 0.856 49 H 0.142 0.858 50 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 0.552 2.286 4.231 4.841 hybrid contribution -0.018 -0.527 0.988 1.120 sum 0.534 1.759 5.219 5.534 Atomic orbital electron populations 1.86538 1.17686 1.81737 1.49296 1.23942 0.85111 1.09084 0.96234 0.95363 0.81027 0.77689 0.87700 1.19537 1.08681 0.91744 0.95758 1.21409 1.01738 0.93623 0.89283 1.43171 1.52740 1.04636 1.14346 1.21611 0.90760 1.05889 0.85263 1.21064 0.89529 0.77359 0.84541 1.90821 1.74555 1.45232 1.27801 1.45950 1.06996 1.72346 1.11971 1.22557 0.78421 0.95668 1.00798 0.86140 1.23578 0.96161 0.98320 0.99711 1.23149 0.85040 0.98026 0.93618 0.88593 1.86085 1.21296 1.65159 1.48131 1.19021 0.86562 0.91843 0.94288 1.21267 1.00548 1.01214 0.99704 1.20997 0.92366 0.97618 0.98871 1.21141 0.98741 1.00814 0.96845 1.21034 0.97415 0.94780 0.96561 1.20496 0.91116 1.03566 1.01831 1.24047 0.96884 0.98229 1.01693 1.18165 1.01245 0.85811 0.94254 1.19948 1.05050 0.89158 1.00630 1.20830 0.98276 0.97904 0.94479 1.20672 1.02439 0.96905 0.96420 1.20284 0.97888 0.90835 0.99143 1.18928 1.03355 0.92587 0.94085 0.77515 0.91153 1.17896 1.18000 0.82085 0.86027 0.86218 0.76269 0.89148 0.87623 0.85352 0.85668 0.85709 0.85155 0.85127 0.88270 0.89804 0.86707 0.85630 0.85786 0.85858 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.03 12.86 -35.23 -0.45 -1.48 16 2 C -0.03 -0.07 3.05 36.01 0.11 0.04 16 3 Si 0.68 0.15 30.79 -169.99 -5.23 -5.08 16 4 C -0.15 -0.74 5.61 -102.71 -0.58 -1.32 16 5 C 0.06 0.26 9.89 -16.73 -0.17 0.09 16 6 N -0.47 -1.58 2.27 -115.71 -0.26 -1.85 16 7 C 0.09 -0.08 6.48 -5.20 -0.03 -0.12 16 8 C 0.49 0.62 7.90 -10.99 -0.09 0.54 16 9 O -0.51 -3.40 16.04 5.56 0.09 -3.31 16 10 N -0.72 1.42 5.36 -53.02 -0.28 1.13 16 11 C 0.13 -0.07 4.15 -67.12 -0.28 -0.35 16 12 H 0.12 0.32 7.50 -51.93 -0.39 -0.07 16 13 C -0.14 0.35 7.66 -25.91 -0.20 0.15 16 14 C 0.06 -0.06 3.75 -25.82 -0.10 -0.15 16 15 H 0.10 -0.22 5.95 -51.93 -0.31 -0.53 16 16 O -0.29 -0.62 10.07 -19.42 -0.20 -0.82 16 17 C 0.13 0.30 6.68 -39.22 -0.26 0.03 16 18 C -0.21 -0.22 9.02 -39.43 -0.36 -0.58 16 19 C -0.08 -0.05 10.04 -39.61 -0.40 -0.45 16 20 C -0.16 -0.12 10.04 -39.56 -0.40 -0.51 16 21 C -0.08 -0.08 10.04 -39.61 -0.40 -0.48 16 22 C -0.15 -0.31 9.99 -39.44 -0.39 -0.71 16 23 C -0.17 0.17 7.72 -25.83 -0.20 -0.03 16 24 C 0.11 0.56 6.80 -83.99 -0.57 -0.02 16 25 C -0.13 -0.46 10.00 -39.43 -0.39 -0.85 16 26 C -0.10 -0.28 10.01 -39.54 -0.40 -0.68 16 27 C -0.15 -0.47 9.97 -39.95 -0.40 -0.87 16 28 C -0.06 -0.28 10.05 -39.64 -0.40 -0.68 16 29 C -0.09 -0.50 6.35 -105.14 -0.67 -1.17 16 30 H 0.38 -1.29 8.74 45.56 0.40 -0.90 16 31 H 0.07 0.07 7.96 -51.93 -0.41 -0.34 16 32 H -0.25 -0.60 7.04 56.52 0.40 -0.20 16 33 H -0.26 -0.87 7.11 56.52 0.40 -0.47 16 34 H 0.16 0.34 6.30 -52.48 -0.33 0.01 16 35 H 0.12 -0.48 8.12 -51.93 -0.42 -0.90 16 36 H 0.12 -0.41 8.14 -51.93 -0.42 -0.83 16 37 H 0.40 -2.23 8.71 -40.82 -0.36 -2.59 16 38 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.11 -0.53 8.11 -51.93 -0.42 -0.95 16 40 H 0.13 -0.11 5.91 -52.49 -0.31 -0.42 16 41 H 0.13 -0.16 8.06 -52.48 -0.42 -0.59 16 42 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 43 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 44 H 0.13 0.15 8.06 -52.49 -0.42 -0.27 16 45 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 46 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 47 H 0.11 0.17 8.06 -52.49 -0.42 -0.25 16 48 H 0.13 0.07 8.06 -52.49 -0.42 -0.36 16 49 H 0.12 0.12 8.06 -52.48 -0.42 -0.30 16 50 H 0.12 0.36 8.06 -52.49 -0.42 -0.06 16 LS Contribution 421.07 15.07 6.35 6.35 Total: 0.00 -12.53 421.07 -13.38 -25.91 By element: Atomic # 1 Polarization: -5.92 SS G_CDS: -6.83 Total: -12.75 kcal Atomic # 6 Polarization: -1.54 SS G_CDS: -6.55 Total: -8.10 kcal Atomic # 7 Polarization: -0.17 SS G_CDS: -0.55 Total: -0.71 kcal Atomic # 8 Polarization: -5.05 SS G_CDS: -0.56 Total: -5.61 kcal Atomic # 14 Polarization: 0.15 SS G_CDS: -5.23 Total: -5.08 kcal Total LS contribution 6.35 Total: 6.35 kcal Total: -12.53 -13.38 -25.91 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_9818708.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.155 kcal (2) G-P(sol) polarization free energy of solvation -12.533 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.622 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.378 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.911 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.244 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds