Wall clock time and date at job start Tue Mar 9 2021 13:02:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35661 * 117.00345 * 2 1 4 4 C 1.38404 * 120.11526 * 359.97438 * 3 2 1 5 5 C 1.38734 * 120.03034 * 180.02562 * 4 3 2 6 6 O 1.35711 * 119.86221 * 180.02562 * 5 4 3 7 7 C 1.42898 * 117.00115 * 359.97438 * 6 5 4 8 8 C 1.39137 * 120.27208 * 359.97438 * 5 4 3 9 9 C 1.50700 * 119.87929 * 180.02562 * 8 5 4 10 10 O 1.42906 * 109.46863 * 284.99568 * 9 8 5 11 11 Si 1.86304 * 109.47213 * 164.99904 * 9 8 5 12 12 C 1.37586 * 120.24361 * 0.27087 * 8 5 4 13 13 C 1.39823 * 119.96070 * 359.50104 * 12 8 5 14 14 C 1.47302 * 120.13452 * 180.25160 * 13 12 8 15 15 O 1.21619 * 119.99770 * 180.22493 * 14 13 12 16 16 N 1.34776 * 120.00004 * 0.22499 * 14 13 12 17 17 C 1.46497 * 119.99740 * 180.02562 * 16 14 13 18 18 H 1.09001 * 112.85358 * 336.19288 * 17 16 14 19 19 C 1.53778 * 113.61577 * 107.50670 * 17 16 14 20 20 C 1.53779 * 87.08441 * 139.97804 * 19 17 16 21 21 H 1.08994 * 113.68955 * 89.12595 * 20 19 17 22 22 O 1.42901 * 113.61478 * 220.01526 * 20 19 17 23 23 C 1.35894 * 117.00213 * 254.18310 * 22 20 19 24 24 C 1.38734 * 120.05745 * 5.43438 * 23 22 20 25 25 C 1.38149 * 119.94433 * 179.70377 * 24 23 22 26 26 C 1.38264 * 120.05330 * 0.58735 * 25 24 23 27 27 C 1.38265 * 120.11539 * 359.68740 * 26 25 24 28 28 C 1.38142 * 120.05192 * 0.02562 * 27 26 25 29 29 C 1.53783 * 87.08010 * 334.56582 * 20 19 17 30 30 H 1.09004 * 109.47297 * 300.00371 * 1 2 3 31 31 H 1.09004 * 109.46875 * 59.99827 * 1 2 3 32 32 H 1.09003 * 109.47033 * 179.97438 * 1 2 3 33 33 H 1.07998 * 119.98599 * 0.02562 * 4 3 2 34 34 H 1.09008 * 109.47243 * 179.97438 * 7 6 5 35 35 H 1.08998 * 109.47198 * 300.00133 * 7 6 5 36 36 H 1.09007 * 109.46972 * 59.99899 * 7 6 5 37 37 H 1.08991 * 109.47165 * 44.99519 * 9 8 5 38 38 H 0.96695 * 114.00276 * 300.00487 * 10 9 8 39 39 H 1.48501 * 110.00029 * 179.97438 * 11 9 8 40 40 H 1.48495 * 110.00010 * 301.31707 * 11 9 8 41 41 H 1.07996 * 120.02215 * 179.72643 * 12 8 5 42 42 H 0.96997 * 120.00327 * 359.97438 * 16 14 13 43 43 H 1.09002 * 113.61161 * 254.52665 * 19 17 16 44 44 H 1.09000 * 113.62044 * 25.42474 * 19 17 16 45 45 H 1.08001 * 120.02781 * 359.97438 * 24 23 22 46 46 H 1.07993 * 119.96913 * 180.31865 * 25 24 23 47 47 H 1.08005 * 119.94085 * 179.70379 * 26 25 24 48 48 H 1.07997 * 119.97157 * 180.02562 * 27 26 25 49 49 H 1.08004 * 120.02613 * 179.97438 * 28 27 26 50 50 H 1.09002 * 113.60931 * 270.88616 * 29 20 19 51 51 H 1.08998 * 113.68621 * 139.99346 * 29 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2935 2.3710 -0.0005 5 6 1.9253 3.6062 -0.0011 6 8 1.1852 4.7437 -0.0011 7 6 -0.2359 4.5931 -0.0011 8 6 3.3145 3.6835 -0.0005 9 6 3.9915 5.0298 -0.0005 10 8 3.8945 5.6117 -1.3022 11 14 5.7861 4.8225 0.4548 12 6 4.0724 2.5352 -0.0051 13 6 3.4461 1.2851 0.0003 14 6 4.2539 0.0533 0.0010 15 8 3.7065 -1.0328 0.0015 16 7 5.5995 0.1298 0.0011 17 6 6.4028 -1.0953 0.0013 18 1 5.8664 -1.9532 0.4068 19 6 7.0951 -1.3782 -1.3424 20 6 8.3199 -1.8261 -0.5275 21 1 8.3094 -2.8845 -0.2671 22 8 9.5653 -1.4047 -1.0873 23 6 10.3177 -2.3542 -1.7031 24 6 9.8185 -3.6382 -1.8668 25 6 10.5830 -4.5999 -2.4986 26 6 11.8494 -4.2870 -2.9567 27 6 12.3515 -3.0096 -2.7896 28 6 11.5887 -2.0427 -2.1638 29 6 7.8085 -0.9101 0.5969 30 1 -0.3634 0.5139 0.8900 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3633 -1.0277 -0.0005 33 1 0.2149 2.3165 -0.0005 34 1 -0.7055 5.5769 -0.0006 35 1 -0.5430 4.0439 -0.8910 36 1 -0.5430 4.0438 0.8890 37 1 3.5052 5.6810 0.7257 38 1 4.3070 5.0849 -2.0003 39 1 6.4652 6.1432 0.4578 40 1 5.9006 4.1891 1.7930 41 1 5.1505 2.5993 -0.0091 42 1 6.0360 0.9960 0.0003 43 1 6.6310 -2.1836 -1.9116 44 1 7.2714 -0.4836 -1.9397 45 1 8.8313 -3.8845 -1.5046 46 1 10.1927 -5.5982 -2.6309 47 1 12.4474 -5.0416 -3.4460 48 1 13.3409 -2.7676 -3.1487 49 1 11.9815 -1.0452 -2.0332 50 1 8.1798 0.1125 0.5298 51 1 7.9199 -1.3364 1.5938 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12060300_12297780.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:02:09 Heat of formation + Delta-G solvation = -78.164785 kcal Electronic energy + Delta-G solvation = -35418.982067 eV Core-core repulsion = 30638.911400 eV Total energy + Delta-G solvation = -4780.070667 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.165 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -42.11190 -41.52866 -40.52426 -39.96906 -39.11173 -38.43607 -37.35229 -36.93766 -34.24882 -32.23016 -31.91732 -31.62272 -30.61578 -29.10456 -28.31748 -26.90610 -26.31529 -26.02293 -24.49509 -23.53070 -23.11084 -22.41304 -21.52100 -20.88773 -20.01104 -19.43747 -18.78633 -18.12159 -17.91899 -17.48557 -17.23536 -16.81248 -16.74641 -16.64072 -16.44895 -16.28423 -16.19317 -15.90648 -15.79013 -15.60941 -15.44123 -15.35223 -15.09018 -14.61994 -14.33316 -14.23070 -14.10799 -13.94909 -13.68687 -13.58322 -13.41659 -13.32262 -12.78184 -12.72880 -12.60753 -12.60393 -12.55176 -12.33021 -12.28559 -12.22925 -11.97923 -11.67124 -11.63351 -11.38389 -10.72038 -10.40710 -10.04548 -9.92497 -9.90077 -9.15769 -9.08542 -5.14011 -0.23043 0.09797 0.44124 0.55210 1.24154 1.57518 1.82365 1.94207 1.95600 2.03199 2.12349 2.44382 2.66095 2.89297 3.29352 3.38099 3.40765 3.46766 3.60057 3.67969 3.70477 3.70989 3.80628 3.93622 3.96574 4.00748 4.03626 4.06903 4.11365 4.12099 4.18477 4.22677 4.32728 4.41356 4.48589 4.50118 4.51489 4.56394 4.59783 4.60198 4.73023 4.75477 4.81378 4.86459 4.91223 5.00669 5.06175 5.11272 5.27543 5.41384 5.50457 5.52629 5.66091 5.87903 5.98648 6.26654 6.50932 6.54314 6.62446 7.33494 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.235 3.765 4 C -0.315 4.315 5 C 0.223 3.777 6 O -0.296 6.296 7 C 0.021 3.979 8 C -0.198 4.198 9 C -0.049 4.049 10 O -0.535 6.535 11 Si 0.671 3.329 12 C -0.004 4.004 13 C -0.210 4.210 14 C 0.569 3.431 15 O -0.517 6.517 16 N -0.720 5.720 17 C 0.130 3.870 18 H 0.123 0.877 19 C -0.167 4.167 20 C 0.057 3.943 21 H 0.105 0.895 22 O -0.299 6.299 23 C 0.129 3.871 24 C -0.210 4.210 25 C -0.080 4.080 26 C -0.159 4.159 27 C -0.081 4.081 28 C -0.154 4.154 29 C -0.139 4.139 30 H 0.057 0.943 31 H 0.058 0.942 32 H 0.107 0.893 33 H 0.145 0.855 34 H 0.107 0.893 35 H 0.060 0.940 36 H 0.058 0.942 37 H 0.115 0.885 38 H 0.376 0.624 39 H -0.250 1.250 40 H -0.251 1.251 41 H 0.140 0.860 42 H 0.399 0.601 43 H 0.080 0.920 44 H 0.099 0.901 45 H 0.129 0.871 46 H 0.125 0.875 47 H 0.124 0.876 48 H 0.129 0.871 49 H 0.130 0.870 50 H 0.101 0.899 51 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.839 -0.051 -0.709 1.099 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.184 6.184 3 C 0.185 3.815 4 C -0.334 4.334 5 C 0.175 3.825 6 O -0.207 6.207 7 C -0.073 4.073 8 C -0.200 4.200 9 C -0.160 4.160 10 O -0.340 6.340 11 Si 0.572 3.428 12 C -0.022 4.022 13 C -0.214 4.214 14 C 0.357 3.643 15 O -0.393 6.393 16 N -0.373 5.373 17 C 0.025 3.975 18 H 0.141 0.859 19 C -0.206 4.206 20 C 0.000 4.000 21 H 0.123 0.877 22 O -0.212 6.212 23 C 0.084 3.916 24 C -0.228 4.228 25 C -0.098 4.098 26 C -0.178 4.178 27 C -0.099 4.099 28 C -0.172 4.172 29 C -0.177 4.177 30 H 0.076 0.924 31 H 0.076 0.924 32 H 0.126 0.874 33 H 0.162 0.838 34 H 0.125 0.875 35 H 0.079 0.921 36 H 0.077 0.923 37 H 0.132 0.868 38 H 0.222 0.778 39 H -0.174 1.174 40 H -0.176 1.176 41 H 0.157 0.843 42 H 0.235 0.765 43 H 0.099 0.901 44 H 0.118 0.882 45 H 0.147 0.853 46 H 0.143 0.857 47 H 0.142 0.858 48 H 0.147 0.853 49 H 0.148 0.852 50 H 0.120 0.880 51 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -0.778 0.036 0.243 0.816 hybrid contribution -1.125 0.347 0.171 1.189 sum -1.902 0.383 0.414 1.984 Atomic orbital electron populations 1.23247 0.78192 1.04874 1.01351 1.86397 1.21206 1.25023 1.85766 1.18712 0.90619 0.84407 0.87723 1.21312 1.01159 0.91508 1.19430 1.18720 0.90455 0.84702 0.88592 1.86162 1.19481 1.28504 1.86533 1.23222 0.77801 1.04682 1.01645 1.19454 0.90856 0.96422 1.13228 1.24823 1.09682 0.92222 0.89269 1.86554 1.82062 1.49315 1.16080 0.95431 0.77236 0.84761 0.85364 1.20685 0.98462 0.90002 0.93045 1.19022 0.90652 0.93521 1.18223 1.17817 0.81733 0.88598 0.76166 1.90848 1.71352 1.28679 1.48403 1.45759 1.05865 1.09083 1.76579 1.22116 0.89769 0.89171 0.96482 0.85945 1.24066 0.95192 1.03375 0.97995 1.23844 0.81425 0.99597 0.95100 0.87702 1.86145 1.31435 1.34713 1.68943 1.19030 0.91156 0.87940 0.93482 1.21292 1.01884 0.93396 1.06262 1.20997 0.94033 0.98915 0.95869 1.21121 0.96478 0.97108 1.03045 1.21020 0.99397 0.92726 0.96740 1.20488 0.92384 1.01006 1.03353 1.23620 0.93935 1.01757 0.98425 0.92410 0.92356 0.87435 0.83758 0.87480 0.92137 0.92296 0.86812 0.77753 1.17415 1.17559 0.84341 0.76548 0.90096 0.88226 0.85332 0.85742 0.85840 0.85297 0.85191 0.88027 0.89394 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.27 -0.88 8.56 -40.61 -0.35 -1.23 16 3 C 0.23 0.55 6.70 -38.73 -0.26 0.29 16 4 C -0.31 -0.22 8.01 -39.34 -0.31 -0.54 16 5 C 0.22 0.28 6.67 -39.06 -0.26 0.02 16 6 O -0.30 -0.39 9.80 -18.84 -0.18 -0.58 16 7 C 0.02 -0.05 9.80 101.05 0.99 0.95 16 8 C -0.20 -0.08 5.27 -104.53 -0.55 -0.63 16 9 C -0.05 0.00 2.37 36.01 0.09 0.08 16 10 O -0.54 -0.33 12.88 -35.23 -0.45 -0.78 16 11 Si 0.67 -1.04 29.91 -169.99 -5.08 -6.13 16 12 C 0.00 0.00 8.14 -39.23 -0.32 -0.32 16 13 C -0.21 -0.37 5.89 -104.83 -0.62 -0.98 16 14 C 0.57 1.55 7.76 -12.58 -0.10 1.46 16 15 O -0.52 -3.35 14.75 -16.66 -0.25 -3.60 16 16 N -0.72 0.44 5.30 -54.13 -0.29 0.15 16 17 C 0.13 -0.11 4.24 -67.12 -0.28 -0.40 16 18 H 0.12 0.04 7.46 -51.93 -0.39 -0.34 16 19 C -0.17 0.16 7.71 -25.92 -0.20 -0.04 16 20 C 0.06 -0.05 3.69 -25.92 -0.10 -0.15 16 21 H 0.11 -0.17 5.95 -51.93 -0.31 -0.48 16 22 O -0.30 -0.41 10.15 -19.41 -0.20 -0.61 16 23 C 0.13 0.25 6.68 -39.21 -0.26 -0.01 16 24 C -0.21 -0.24 9.02 -39.43 -0.36 -0.59 16 25 C -0.08 -0.06 10.04 -39.60 -0.40 -0.46 16 26 C -0.16 -0.11 10.04 -39.56 -0.40 -0.51 16 27 C -0.08 -0.06 10.04 -39.61 -0.40 -0.46 16 28 C -0.15 -0.23 9.99 -39.43 -0.39 -0.63 16 29 C -0.14 0.29 7.66 -25.92 -0.20 0.09 16 30 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 31 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 32 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 33 H 0.14 -0.21 4.50 -52.49 -0.24 -0.45 16 34 H 0.11 -0.37 8.14 -51.92 -0.42 -0.79 16 35 H 0.06 -0.18 7.65 -51.93 -0.40 -0.58 16 36 H 0.06 -0.19 7.65 -51.92 -0.40 -0.58 16 37 H 0.11 0.14 7.82 -51.93 -0.41 -0.27 16 38 H 0.38 -1.31 8.70 45.56 0.40 -0.91 16 39 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 40 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 41 H 0.14 -0.53 3.44 -52.49 -0.18 -0.71 16 42 H 0.40 -1.36 6.75 -40.82 -0.28 -1.63 16 43 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 44 H 0.10 -0.09 8.14 -51.93 -0.42 -0.52 16 45 H 0.13 -0.06 5.91 -52.49 -0.31 -0.37 16 46 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 47 H 0.12 -0.12 8.06 -52.48 -0.42 -0.55 16 48 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 49 H 0.13 0.05 8.06 -52.48 -0.42 -0.38 16 50 H 0.10 -0.29 8.12 -51.93 -0.42 -0.71 16 51 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 LS Contribution 417.26 15.07 6.29 6.29 Total: 0.00 -10.78 417.26 -10.57 -21.35 By element: Atomic # 1 Polarization: -6.29 SS G_CDS: -6.72 Total: -13.02 kcal Atomic # 6 Polarization: 1.49 SS G_CDS: -3.33 Total: -1.85 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -0.29 Total: 0.15 kcal Atomic # 8 Polarization: -5.37 SS G_CDS: -1.43 Total: -6.80 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.08 Total: -6.13 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -10.78 -10.57 -21.35 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12060300_12297780.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.818 kcal (2) G-P(sol) polarization free energy of solvation -10.779 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.596 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.569 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.347 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.165 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds