Wall clock time and date at job start Tue Mar 9 2021 13:04:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86301 * 109.46756 * 2 1 4 4 C 1.50705 * 109.46975 * 240.00530 * 2 1 3 5 5 C 1.38247 * 119.97330 * 120.00081 * 4 2 1 6 6 C 1.38286 * 120.10909 * 180.02562 * 5 4 2 7 7 C 1.38118 * 120.05637 * 359.95130 * 6 5 4 8 8 C 1.38757 * 119.94916 * 0.02562 * 7 6 5 9 9 O 1.35897 * 120.06058 * 180.02562 * 8 7 6 10 10 C 1.42900 * 116.99772 * 0.02562 * 9 8 7 11 11 C 1.53006 * 109.46971 * 179.97438 * 10 9 8 12 12 C 1.50700 * 109.47034 * 179.97438 * 11 10 9 13 13 O 1.21281 * 119.99874 * 0.02562 * 12 11 10 14 14 N 1.34771 * 119.99912 * 179.97438 * 12 11 10 15 15 C 1.46503 * 120.00269 * 180.02562 * 14 12 11 16 16 H 1.09000 * 112.84352 * 23.80146 * 15 14 12 17 17 C 1.53773 * 113.61730 * 155.00170 * 15 14 12 18 18 C 1.53785 * 87.08210 * 140.06450 * 17 15 14 19 19 H 1.09000 * 113.61133 * 89.19982 * 18 17 15 20 20 O 1.42896 * 113.61649 * 220.01721 * 18 17 15 21 21 C 1.35896 * 117.00384 * 203.31882 * 20 18 17 22 22 C 1.38738 * 120.05346 * 354.30322 * 21 20 18 23 23 C 1.38142 * 119.94553 * 179.97438 * 22 21 20 24 24 C 1.38271 * 120.05341 * 0.25260 * 23 22 21 25 25 C 1.38261 * 120.11003 * 359.49087 * 24 23 22 26 26 C 1.38144 * 120.06035 * 0.51148 * 25 24 23 27 27 C 1.53787 * 87.17285 * 334.61205 * 18 17 15 28 28 C 1.38162 * 119.96774 * 300.24501 * 4 2 1 29 29 H 0.96700 * 114.00589 * 60.00249 * 1 2 3 30 30 H 1.08993 * 109.47642 * 119.99723 * 2 1 3 31 31 H 1.48505 * 110.00211 * 298.68215 * 3 2 1 32 32 H 1.48502 * 110.00239 * 59.99921 * 3 2 1 33 33 H 1.07996 * 119.94113 * 359.97438 * 5 4 2 34 34 H 1.08000 * 119.97033 * 179.97438 * 6 5 4 35 35 H 1.08004 * 120.02975 * 180.02562 * 7 6 5 36 36 H 1.08991 * 109.47507 * 59.99802 * 10 9 8 37 37 H 1.09009 * 109.46773 * 299.99634 * 10 9 8 38 38 H 1.08998 * 109.46818 * 59.99790 * 11 10 9 39 39 H 1.09001 * 109.46546 * 299.99712 * 11 10 9 40 40 H 0.97000 * 119.99892 * 0.02562 * 14 12 11 41 41 H 1.09003 * 113.61454 * 25.51886 * 17 15 14 42 42 H 1.08997 * 113.69156 * 254.62724 * 17 15 14 43 43 H 1.08002 * 120.02410 * 359.95130 * 22 21 20 44 44 H 1.07992 * 119.97385 * 179.97438 * 23 22 21 45 45 H 1.07996 * 119.93994 * 179.72540 * 24 23 22 46 46 H 1.08002 * 119.97444 * 180.25837 * 25 24 23 47 47 H 1.07998 * 120.03011 * 179.72767 * 26 25 24 48 48 H 1.08999 * 113.61562 * 139.93856 * 27 18 17 49 49 H 1.09001 * 113.60754 * 270.83986 * 27 18 17 50 50 H 1.07999 * 120.03430 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.7261 -0.0379 -2.1402 6 6 3.1881 -0.6868 -3.2706 7 6 2.8572 -2.0091 -3.4930 8 6 2.0601 -2.6865 -2.5813 9 8 1.7336 -3.9878 -2.7976 10 6 2.2463 -4.5966 -3.9844 11 6 1.7771 -6.0513 -4.0550 12 6 2.3173 -6.6932 -5.3069 13 8 3.0097 -6.0506 -6.0675 14 7 2.0317 -7.9815 -5.5807 15 6 2.5573 -8.6058 -6.7974 16 1 3.4554 -8.1141 -7.1712 17 6 2.6877 -10.1347 -6.6984 18 6 2.1803 -10.1932 -8.1490 19 1 2.9757 -10.1371 -8.8922 20 8 1.2671 -11.2647 -8.3933 21 6 1.1497 -11.6949 -9.6770 22 6 1.8067 -11.0230 -10.6977 23 6 1.6863 -11.4625 -12.0018 24 6 0.9075 -12.5679 -12.2909 25 6 0.2560 -13.2423 -11.2748 26 6 0.3732 -12.8068 -9.9691 27 6 1.4908 -8.8448 -7.8817 28 6 1.5929 -2.0316 -1.4512 29 1 -0.3934 0.4416 -0.7650 30 1 1.7924 -0.5137 0.8899 31 1 1.5877 2.4586 -1.2242 32 1 1.5613 2.4680 1.2085 33 1 2.9858 0.9962 -1.9680 34 1 3.8085 -0.1592 -3.9799 35 1 3.2187 -2.5157 -4.3757 36 1 3.3356 -4.5671 -3.9665 37 1 1.8824 -4.0544 -4.8573 38 1 0.6877 -6.0811 -4.0727 39 1 2.1413 -6.5931 -3.1821 40 1 1.4782 -8.4955 -4.9721 41 1 2.0045 -10.5855 -5.9784 42 1 3.7148 -10.4800 -6.5807 43 1 2.4115 -10.1569 -10.4729 44 1 2.1971 -10.9397 -12.7967 45 1 0.8111 -12.9072 -13.3116 46 1 -0.3483 -14.1079 -11.5026 47 1 -0.1394 -13.3313 -9.1763 48 1 1.5536 -8.1489 -8.7183 49 1 0.4799 -8.9424 -7.4859 50 1 0.9684 -2.5552 -0.7426 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12060300_4549614.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:48 Heat of formation + Delta-G solvation = -56.471683 kcal Electronic energy + Delta-G solvation = -30914.614704 eV Core-core repulsion = 26454.166912 eV Total energy + Delta-G solvation = -4460.447792 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.78278 -41.30544 -40.74531 -39.48810 -39.03680 -37.51693 -37.31125 -34.49343 -33.20645 -32.43939 -31.94503 -30.85326 -30.65356 -27.18278 -27.03544 -26.49111 -24.99394 -23.64984 -23.56643 -22.94247 -22.03805 -21.61293 -20.88235 -19.53915 -19.34959 -18.21750 -17.85273 -17.58815 -17.51898 -17.12170 -16.89648 -16.78130 -16.53344 -16.47449 -16.23400 -16.05794 -15.70890 -15.46494 -15.22129 -14.92858 -14.74738 -14.43900 -14.38912 -14.21380 -14.05343 -14.02466 -13.72791 -13.54810 -13.22361 -12.99906 -12.86911 -12.76251 -12.68639 -12.44882 -12.39763 -12.37118 -11.92550 -11.82952 -11.73059 -11.54366 -11.49940 -11.05061 -10.64183 -10.26019 -9.96458 -9.88980 -9.21835 -9.16037 -4.93687 0.24363 0.37783 0.44046 0.48598 1.28208 1.41983 1.58401 1.62514 1.97072 2.13684 2.50965 2.70426 2.82600 3.16323 3.23947 3.38354 3.45348 3.53846 3.57229 3.64401 3.78891 3.81249 3.86276 3.89890 3.93384 4.07309 4.10395 4.22863 4.24932 4.27509 4.34427 4.41690 4.45071 4.47253 4.50315 4.54676 4.55447 4.60022 4.62714 4.71331 4.72132 4.74192 4.89839 5.00581 5.04582 5.27951 5.29629 5.35334 5.40983 5.46216 5.47242 5.60071 5.71104 5.81154 6.24854 6.39202 6.41262 6.44024 6.99848 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.076 4.076 3 Si 0.688 3.312 4 C -0.081 4.081 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.132 3.868 9 O -0.316 6.316 10 C 0.075 3.925 11 C -0.142 4.142 12 C 0.523 3.477 13 O -0.537 6.537 14 N -0.716 5.716 15 C 0.126 3.874 16 H 0.123 0.877 17 C -0.137 4.137 18 C 0.058 3.942 19 H 0.106 0.894 20 O -0.300 6.300 21 C 0.128 3.872 22 C -0.210 4.210 23 C -0.080 4.080 24 C -0.158 4.158 25 C -0.080 4.080 26 C -0.153 4.153 27 C -0.168 4.168 28 C -0.126 4.126 29 H 0.376 0.624 30 H 0.120 0.880 31 H -0.260 1.260 32 H -0.257 1.257 33 H 0.129 0.871 34 H 0.131 0.869 35 H 0.132 0.868 36 H 0.073 0.927 37 H 0.072 0.928 38 H 0.108 0.892 39 H 0.109 0.891 40 H 0.406 0.594 41 H 0.101 0.899 42 H 0.088 0.912 43 H 0.128 0.872 44 H 0.125 0.875 45 H 0.124 0.876 46 H 0.130 0.870 47 H 0.130 0.870 48 H 0.081 0.919 49 H 0.098 0.902 50 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.920 -2.100 -0.842 2.967 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.185 4.185 3 Si 0.589 3.411 4 C -0.081 4.081 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.182 4.182 12 C 0.310 3.690 13 O -0.414 6.414 14 N -0.367 5.367 15 C 0.021 3.979 16 H 0.140 0.860 17 C -0.176 4.176 18 C 0.001 3.999 19 H 0.124 0.876 20 O -0.213 6.213 21 C 0.083 3.917 22 C -0.228 4.228 23 C -0.098 4.098 24 C -0.176 4.176 25 C -0.098 4.098 26 C -0.172 4.172 27 C -0.207 4.207 28 C -0.144 4.144 29 H 0.224 0.776 30 H 0.138 0.862 31 H -0.185 1.185 32 H -0.182 1.182 33 H 0.146 0.854 34 H 0.148 0.852 35 H 0.150 0.850 36 H 0.091 0.909 37 H 0.091 0.909 38 H 0.126 0.874 39 H 0.127 0.873 40 H 0.241 0.759 41 H 0.120 0.880 42 H 0.107 0.893 43 H 0.146 0.854 44 H 0.143 0.857 45 H 0.142 0.858 46 H 0.148 0.852 47 H 0.148 0.852 48 H 0.100 0.900 49 H 0.117 0.883 50 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 2.088 -1.303 -0.539 2.519 hybrid contribution -1.120 -0.402 -0.690 1.376 sum 0.967 -1.705 -1.229 2.314 Atomic orbital electron populations 1.86602 1.17572 1.80005 1.49315 1.25078 0.84065 1.11095 0.98312 0.94895 0.91752 0.74200 0.80204 1.20073 0.97649 0.93851 0.96535 1.20928 1.00830 1.00010 0.95455 1.20927 0.97830 0.93692 0.96672 1.21397 1.03130 0.96494 1.01062 1.18957 0.94662 0.83171 0.94509 1.85975 1.71178 1.22748 1.43112 1.22414 0.99362 0.92031 0.86303 1.21478 1.03989 0.95466 0.97280 1.20341 0.79942 0.81847 0.86901 1.90752 1.38008 1.62493 1.50101 1.45837 1.53741 1.12143 1.25005 1.22202 0.98108 0.92453 0.85179 0.85952 1.23592 1.03149 0.94936 0.95879 1.23831 0.92381 0.85887 0.97823 0.87632 1.86146 1.60083 1.50663 1.24405 1.19031 0.95699 0.93699 0.83306 1.21283 1.05108 1.02974 0.93476 1.21002 0.97095 0.95911 0.95791 1.21132 0.99713 0.97172 0.99620 1.21030 0.97953 0.99075 0.91775 1.20493 1.02429 0.96706 0.97581 1.24091 1.00405 0.96398 0.99782 1.20242 1.03082 0.93997 0.97124 0.77594 0.86198 1.18482 1.18215 0.85389 0.85151 0.84983 0.90852 0.90944 0.87376 0.87299 0.75891 0.88041 0.89300 0.85378 0.85680 0.85756 0.85227 0.85188 0.90046 0.88338 0.84815 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.88 12.76 -35.23 -0.45 -1.33 16 2 C -0.08 -0.02 2.82 36.01 0.10 0.08 16 3 Si 0.69 -0.48 29.79 -169.99 -5.06 -5.54 16 4 C -0.08 -0.07 5.39 -104.64 -0.56 -0.64 16 5 C -0.15 -0.03 8.67 -39.56 -0.34 -0.37 16 6 C -0.07 -0.02 10.04 -39.61 -0.40 -0.42 16 7 C -0.20 -0.25 9.04 -39.43 -0.36 -0.60 16 8 C 0.13 0.29 6.69 -39.21 -0.26 0.02 16 9 O -0.32 -0.57 10.14 -19.42 -0.20 -0.77 16 10 C 0.07 0.01 4.03 37.16 0.15 0.16 16 11 C -0.14 0.29 6.07 -27.88 -0.17 0.12 16 12 C 0.52 -0.12 7.83 -10.99 -0.09 -0.21 16 13 O -0.54 -1.95 15.58 5.56 0.09 -1.86 16 14 N -0.72 1.70 5.36 -52.93 -0.28 1.41 16 15 C 0.13 -0.23 4.24 -67.03 -0.28 -0.52 16 16 H 0.12 -0.09 7.46 -51.93 -0.39 -0.48 16 17 C -0.14 0.36 7.67 -25.92 -0.20 0.16 16 18 C 0.06 -0.07 3.67 -25.91 -0.10 -0.16 16 19 H 0.11 -0.22 5.96 -51.93 -0.31 -0.53 16 20 O -0.30 -0.40 10.15 -19.41 -0.20 -0.60 16 21 C 0.13 0.23 6.68 -39.21 -0.26 -0.03 16 22 C -0.21 -0.20 9.01 -39.43 -0.36 -0.55 16 23 C -0.08 -0.05 10.04 -39.60 -0.40 -0.45 16 24 C -0.16 -0.09 10.04 -39.56 -0.40 -0.48 16 25 C -0.08 -0.05 10.04 -39.61 -0.40 -0.45 16 26 C -0.15 -0.23 9.99 -39.43 -0.39 -0.62 16 27 C -0.17 0.23 7.73 -25.82 -0.20 0.03 16 28 C -0.13 -0.25 9.55 -39.43 -0.38 -0.63 16 29 H 0.38 -0.41 8.70 45.56 0.40 -0.02 16 30 H 0.12 -0.06 7.96 -51.93 -0.41 -0.48 16 31 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 32 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 33 H 0.13 -0.21 4.87 -52.49 -0.26 -0.47 16 34 H 0.13 -0.23 8.06 -52.49 -0.42 -0.65 16 35 H 0.13 0.03 6.30 -52.48 -0.33 -0.30 16 36 H 0.07 0.02 7.62 -51.93 -0.40 -0.37 16 37 H 0.07 0.04 7.62 -51.92 -0.40 -0.36 16 38 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 39 H 0.11 -0.38 8.14 -51.93 -0.42 -0.81 16 40 H 0.41 -1.96 8.73 -40.82 -0.36 -2.32 16 41 H 0.10 -0.31 8.12 -51.93 -0.42 -0.73 16 42 H 0.09 -0.28 8.14 -51.93 -0.42 -0.71 16 43 H 0.13 -0.10 5.92 -52.49 -0.31 -0.41 16 44 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 45 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 46 H 0.13 -0.19 8.06 -52.49 -0.42 -0.61 16 47 H 0.13 0.05 8.06 -52.49 -0.42 -0.38 16 48 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 49 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 50 H 0.13 0.26 8.06 -52.49 -0.42 -0.16 16 LS Contribution 415.54 15.07 6.26 6.26 Total: 0.00 -8.72 415.54 -12.16 -20.88 By element: Atomic # 1 Polarization: -5.88 SS G_CDS: -7.03 Total: -12.91 kcal Atomic # 6 Polarization: -0.25 SS G_CDS: -5.28 Total: -5.54 kcal Atomic # 7 Polarization: 1.70 SS G_CDS: -0.28 Total: 1.41 kcal Atomic # 8 Polarization: -3.81 SS G_CDS: -0.76 Total: -4.57 kcal Atomic # 14 Polarization: -0.48 SS G_CDS: -5.06 Total: -5.54 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -8.72 -12.16 -20.88 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12060300_4549614.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.594 kcal (2) G-P(sol) polarization free energy of solvation -8.722 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.316 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.156 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.878 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.472 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds