Wall clock time and date at job start Tue Mar 9 2021 13:05:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35979 * 116.99918 * 2 1 4 4 C 1.38681 * 119.99531 * 180.02562 * 3 2 1 5 5 C 1.38155 * 119.99443 * 180.23603 * 4 3 2 6 6 C 1.50700 * 119.99724 * 179.74802 * 5 4 3 7 7 O 1.42899 * 109.47514 * 104.99772 * 6 5 4 8 8 Si 1.86296 * 109.47322 * 344.99499 * 6 5 4 9 9 C 1.38672 * 120.00287 * 359.53140 * 5 4 3 10 10 O 1.35980 * 120.00285 * 180.23127 * 9 5 4 11 11 C 1.42908 * 117.00151 * 180.21111 * 10 9 5 12 12 C 1.50697 * 109.47225 * 180.02562 * 11 10 9 13 13 O 1.21286 * 119.99858 * 359.97438 * 12 11 10 14 14 N 1.34771 * 120.00129 * 180.02562 * 12 11 10 15 15 C 1.46500 * 120.00202 * 180.02562 * 14 12 11 16 16 H 1.09000 * 112.84922 * 336.19536 * 15 14 12 17 17 C 1.53781 * 113.61757 * 107.49464 * 15 14 12 18 18 C 1.53787 * 87.08099 * 139.98130 * 17 15 14 19 19 H 1.08997 * 113.60877 * 89.11964 * 18 17 15 20 20 O 1.42894 * 113.61523 * 220.02186 * 18 17 15 21 21 C 1.35902 * 116.99848 * 254.18192 * 20 18 17 22 22 C 1.38725 * 120.05717 * 5.43406 * 21 20 18 23 23 C 1.38151 * 119.94222 * 179.70407 * 22 21 20 24 24 C 1.38266 * 120.05356 * 0.59170 * 23 22 21 25 25 C 1.38264 * 120.11374 * 359.68186 * 24 23 22 26 26 C 1.38138 * 120.05329 * 0.02562 * 25 24 23 27 27 C 1.53773 * 113.61799 * 204.99543 * 15 14 12 28 28 C 1.38724 * 120.00129 * 0.44760 * 9 5 4 29 29 C 1.38114 * 119.99730 * 359.78821 * 28 9 5 30 30 H 1.08999 * 109.46645 * 299.99897 * 1 2 3 31 31 H 1.09004 * 109.46837 * 59.99675 * 1 2 3 32 32 H 1.08999 * 109.46968 * 179.97438 * 1 2 3 33 33 H 1.07999 * 120.00597 * 359.95185 * 4 3 2 34 34 H 1.09005 * 109.47023 * 224.99655 * 6 5 4 35 35 H 0.96697 * 113.99437 * 299.99849 * 7 6 5 36 36 H 1.48498 * 109.99945 * 58.68174 * 8 6 5 37 37 H 1.48497 * 110.00398 * 180.02562 * 8 6 5 38 38 H 1.09000 * 109.46673 * 300.00294 * 11 10 9 39 39 H 1.08997 * 109.46760 * 60.00097 * 11 10 9 40 40 H 0.96993 * 120.00125 * 359.97438 * 14 12 11 41 41 H 1.08994 * 113.62226 * 254.53278 * 17 15 14 42 42 H 1.09004 * 113.60942 * 25.43826 * 17 15 14 43 43 H 1.07993 * 120.02839 * 359.97438 * 22 21 20 44 44 H 1.08004 * 119.96930 * 180.32135 * 23 22 21 45 45 H 1.08006 * 119.93796 * 179.70724 * 24 23 22 46 46 H 1.07999 * 119.97339 * 180.02562 * 25 24 23 47 47 H 1.08003 * 120.02837 * 180.02562 * 26 25 24 48 48 H 1.09006 * 113.61103 * 334.57013 * 27 15 14 49 49 H 1.09006 * 113.61754 * 105.46504 * 27 15 14 50 50 H 1.08000 * 120.00367 * 179.76629 * 28 9 5 51 51 H 1.07996 * 120.00190 * 180.02562 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4313 1.2841 -0.0005 5 6 4.0585 2.5151 0.0044 6 6 5.5634 2.5939 0.0095 7 8 6.0252 2.9700 -1.2894 8 14 6.2708 0.9311 0.4628 9 6 3.3033 3.6781 0.0001 10 8 3.9206 4.8897 0.0002 11 6 3.0806 6.0458 0.0002 12 6 3.9348 7.2874 -0.0003 13 8 5.1439 7.1916 -0.0002 14 7 3.3553 8.5041 0.0002 15 6 4.1856 9.7110 -0.0009 16 1 5.1831 9.5389 0.4034 17 6 4.1844 10.4585 -1.3448 18 6 4.1368 11.7620 -0.5301 19 1 5.1215 12.1513 -0.2715 20 8 3.2751 12.7554 -1.0893 21 6 3.8690 13.8108 -1.7059 22 6 5.2461 13.8341 -1.8712 23 6 5.8467 14.9054 -2.5039 24 6 5.0776 15.9594 -2.9613 25 6 3.7054 15.9412 -2.7928 26 6 3.0995 14.8696 -2.1662 27 6 3.4835 10.9424 0.5951 28 6 1.9179 3.6056 0.0002 29 6 1.2909 2.3750 0.0001 30 1 -0.3632 0.5138 0.8900 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3633 -1.0277 -0.0005 33 1 4.0195 0.3783 -0.0002 34 1 5.8858 3.3369 0.7390 35 1 5.7743 2.3525 -1.9900 36 1 5.8128 -0.0969 -0.5060 37 1 7.7544 0.9957 0.4720 38 1 2.4514 6.0377 -0.8897 39 1 2.4514 6.0377 0.8902 40 1 2.3883 8.5807 0.0005 41 1 5.1048 10.3333 -1.9150 42 1 3.2887 10.2833 -1.9409 43 1 5.8478 13.0135 -1.5095 44 1 6.9183 14.9215 -2.6374 45 1 5.5496 16.7982 -3.4514 46 1 3.1068 16.7655 -3.1513 47 1 2.0275 14.8556 -2.0351 48 1 2.3962 10.8995 0.5293 49 1 3.8381 11.2079 1.5911 50 1 1.3297 4.5113 0.0006 51 1 0.2124 2.3185 -0.0002 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12060300_4974302.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:29 Heat of formation + Delta-G solvation = -76.547584 kcal Electronic energy + Delta-G solvation = -34140.239074 eV Core-core repulsion = 29360.238534 eV Total energy + Delta-G solvation = -4780.000540 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.165 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -41.87506 -41.59790 -40.81659 -39.95017 -39.26176 -38.28467 -37.46641 -36.95349 -34.48342 -32.82974 -31.96235 -31.09040 -30.71346 -29.47066 -27.96346 -26.90825 -26.64417 -25.94242 -23.90195 -23.51714 -22.85676 -22.43406 -21.75575 -20.89155 -19.69589 -19.50827 -18.78167 -18.43512 -17.76981 -17.63285 -17.48328 -17.23242 -16.80655 -16.65255 -16.54966 -16.44041 -16.09383 -16.04674 -15.90268 -15.48154 -15.35534 -15.21434 -15.08627 -14.71649 -14.38439 -14.34079 -14.11400 -14.01501 -13.66527 -13.58909 -13.47729 -13.43850 -13.02156 -12.78850 -12.63802 -12.50033 -12.44116 -12.38847 -12.33743 -11.88469 -11.75900 -11.68113 -11.42934 -11.42152 -11.00834 -10.57097 -10.23127 -10.12955 -9.98959 -9.19011 -8.79451 -4.96507 0.06299 0.35449 0.36584 0.45036 1.26163 1.39612 1.43876 1.54928 1.90323 2.17655 2.35670 2.55193 2.66415 2.80306 3.26927 3.34886 3.41354 3.51585 3.64562 3.66732 3.69056 3.75819 3.88030 3.95286 3.96541 4.08245 4.10377 4.14014 4.16997 4.25348 4.29742 4.43209 4.43887 4.46494 4.48334 4.50875 4.55390 4.61334 4.69235 4.72485 4.78666 4.79010 4.86794 4.95616 4.99038 5.05404 5.15401 5.22559 5.31802 5.37794 5.44018 5.45844 5.58469 5.82981 6.18416 6.39117 6.43114 6.47192 6.51065 7.08641 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.336 6.336 3 C 0.088 3.912 4 C -0.126 4.126 5 C -0.118 4.118 6 C -0.076 4.076 7 O -0.544 6.544 8 Si 0.774 3.226 9 C 0.101 3.899 10 O -0.309 6.309 11 C 0.035 3.965 12 C 0.514 3.486 13 O -0.568 6.568 14 N -0.698 5.698 15 C 0.127 3.873 16 H 0.107 0.893 17 C -0.166 4.166 18 C 0.052 3.948 19 H 0.111 0.889 20 O -0.309 6.309 21 C 0.112 3.888 22 C -0.220 4.220 23 C -0.090 4.090 24 C -0.168 4.168 25 C -0.086 4.086 26 C -0.170 4.170 27 C -0.122 4.122 28 C -0.163 4.163 29 C -0.158 4.158 30 H 0.069 0.931 31 H 0.065 0.935 32 H 0.113 0.887 33 H 0.145 0.855 34 H 0.107 0.893 35 H 0.382 0.618 36 H -0.273 1.273 37 H -0.300 1.300 38 H 0.120 0.880 39 H 0.128 0.872 40 H 0.422 0.578 41 H 0.070 0.930 42 H 0.099 0.901 43 H 0.138 0.862 44 H 0.140 0.860 45 H 0.141 0.859 46 H 0.148 0.852 47 H 0.136 0.864 48 H 0.114 0.886 49 H 0.098 0.902 50 H 0.165 0.835 51 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.050 1.188 2.368 9.430 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.250 6.250 3 C 0.043 3.957 4 C -0.144 4.144 5 C -0.119 4.119 6 C -0.184 4.184 7 O -0.352 6.352 8 Si 0.678 3.322 9 C 0.056 3.944 10 O -0.223 6.223 11 C -0.043 4.043 12 C 0.301 3.699 13 O -0.446 6.446 14 N -0.352 5.352 15 C 0.022 3.978 16 H 0.125 0.875 17 C -0.205 4.205 18 C -0.005 4.005 19 H 0.128 0.872 20 O -0.223 6.223 21 C 0.067 3.933 22 C -0.239 4.239 23 C -0.108 4.108 24 C -0.186 4.186 25 C -0.104 4.104 26 C -0.188 4.188 27 C -0.159 4.159 28 C -0.182 4.182 29 C -0.176 4.176 30 H 0.088 0.912 31 H 0.083 0.917 32 H 0.131 0.869 33 H 0.163 0.837 34 H 0.125 0.875 35 H 0.230 0.770 36 H -0.200 1.200 37 H -0.229 1.229 38 H 0.138 0.862 39 H 0.145 0.855 40 H 0.261 0.739 41 H 0.089 0.911 42 H 0.118 0.882 43 H 0.156 0.844 44 H 0.158 0.842 45 H 0.158 0.842 46 H 0.166 0.834 47 H 0.154 0.846 48 H 0.132 0.868 49 H 0.117 0.883 50 H 0.183 0.817 51 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -7.387 0.757 2.493 7.833 hybrid contribution -0.440 0.424 -1.394 1.522 sum -7.827 1.182 1.099 7.991 Atomic orbital electron populations 1.23348 0.76397 1.05537 1.02405 1.86081 1.23398 1.26505 1.89039 1.18956 0.91989 0.85217 0.99579 1.20277 0.92565 0.97065 1.04473 1.19363 0.96072 0.90554 1.05900 1.25116 0.91974 1.13492 0.87838 1.86657 1.78584 1.52685 1.17238 0.94008 0.76590 0.72485 0.89112 1.18831 0.91498 0.84519 0.99561 1.86207 1.35132 1.11862 1.89054 1.22718 0.92650 0.82196 1.06697 1.20588 0.88377 0.85515 0.75431 1.90781 1.16754 1.87314 1.49742 1.45560 1.11204 1.03723 1.74681 1.22070 0.96342 0.82694 0.96695 0.87530 1.24037 1.03853 0.94661 0.97948 1.23972 0.95309 0.85707 0.95485 0.87183 1.86117 1.35986 1.31095 1.69119 1.19243 0.91921 0.88065 0.94081 1.21486 0.93771 1.02126 1.06506 1.21300 1.01016 0.92888 0.95612 1.21428 0.94287 0.99988 1.02897 1.21316 0.95267 0.97545 0.96297 1.20722 1.00807 0.93465 1.03821 1.23537 1.02728 0.91381 0.98301 1.21385 0.92123 0.99987 1.04682 1.21401 1.01527 0.90897 1.03792 0.91232 0.91666 0.86865 0.83732 0.87507 0.76951 1.19959 1.22860 0.86220 0.85451 0.73933 0.91089 0.88226 0.84446 0.84189 0.84154 0.83388 0.84605 0.86768 0.88299 0.81723 0.82243 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.34 -0.70 10.50 -93.31 -0.98 -1.68 16 3 C 0.09 0.19 6.69 22.49 0.15 0.34 16 4 C -0.13 -0.44 8.59 22.36 0.19 -0.24 16 5 C -0.12 -0.60 5.27 -19.78 -0.10 -0.70 16 6 C -0.08 -0.51 2.37 71.24 0.17 -0.34 16 7 O -0.54 -5.62 12.88 -148.98 -1.92 -7.54 16 8 Si 0.77 2.23 30.25 68.60 2.07 4.30 16 9 C 0.10 0.41 6.66 22.49 0.15 0.56 16 10 O -0.31 -2.10 9.00 -74.29 -0.67 -2.77 16 11 C 0.04 -0.10 5.22 71.24 0.37 0.28 16 12 C 0.51 1.55 7.91 87.66 0.69 2.25 16 13 O -0.57 -8.54 16.10 15.99 0.26 -8.28 16 14 N -0.70 2.98 5.35 -440.06 -2.36 0.62 16 15 C 0.13 -0.29 4.24 45.51 0.19 -0.10 16 16 H 0.11 0.19 7.46 -2.39 -0.02 0.17 16 17 C -0.17 0.20 7.71 31.12 0.24 0.44 16 18 C 0.05 -0.08 3.69 31.12 0.11 0.03 16 19 H 0.11 -0.30 5.95 -2.39 -0.01 -0.31 16 20 O -0.31 -0.99 10.15 -92.45 -0.94 -1.93 16 21 C 0.11 0.51 6.68 22.51 0.15 0.66 16 22 C -0.22 -0.67 9.02 22.37 0.20 -0.47 16 23 C -0.09 -0.17 10.04 22.26 0.22 0.05 16 24 C -0.17 -0.22 10.04 22.28 0.22 0.01 16 25 C -0.09 -0.12 10.04 22.25 0.22 0.10 16 26 C -0.17 -0.60 9.99 22.37 0.22 -0.37 16 27 C -0.12 0.68 7.66 31.12 0.24 0.92 16 28 C -0.16 0.35 9.03 22.36 0.20 0.56 16 29 C -0.16 0.33 9.03 22.36 0.20 0.53 16 30 H 0.07 -0.59 7.66 -2.39 -0.02 -0.61 16 31 H 0.06 -0.51 7.66 -2.39 -0.02 -0.53 16 32 H 0.11 -0.95 8.14 -2.39 -0.02 -0.97 16 33 H 0.15 0.31 4.86 -2.91 -0.01 0.30 16 34 H 0.11 0.94 7.83 -2.38 -0.02 0.92 16 35 H 0.38 1.27 8.70 -74.06 -0.64 0.63 16 36 H -0.27 -1.38 6.68 99.48 0.66 -0.71 16 37 H -0.30 -3.05 7.11 99.48 0.71 -2.34 16 38 H 0.12 -1.02 7.66 -2.39 -0.02 -1.04 16 39 H 0.13 -1.26 7.66 -2.39 -0.02 -1.28 16 40 H 0.42 -4.97 8.73 -92.71 -0.81 -5.78 16 41 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 42 H 0.10 -0.14 8.14 -2.38 -0.02 -0.16 16 43 H 0.14 0.01 5.91 -2.91 -0.02 -0.01 16 44 H 0.14 -0.28 8.06 -2.91 -0.02 -0.31 16 45 H 0.14 -0.38 8.06 -2.91 -0.02 -0.40 16 46 H 0.15 -0.49 8.06 -2.91 -0.02 -0.51 16 47 H 0.14 0.16 8.06 -2.91 -0.02 0.14 16 48 H 0.11 -0.90 8.12 -2.38 -0.02 -0.92 16 49 H 0.10 -0.69 8.14 -2.38 -0.02 -0.71 16 50 H 0.17 -1.56 6.29 -2.91 -0.02 -1.58 16 51 H 0.16 -1.23 6.29 -2.91 -0.02 -1.25 16 Total: 0.00 -29.14 423.29 0.18 -28.96 By element: Atomic # 1 Polarization: -16.75 SS G_CDS: -0.46 Total: -17.21 kcal Atomic # 6 Polarization: 0.35 SS G_CDS: 5.17 Total: 5.52 kcal Atomic # 7 Polarization: 2.98 SS G_CDS: -2.36 Total: 0.62 kcal Atomic # 8 Polarization: -17.95 SS G_CDS: -4.25 Total: -22.19 kcal Atomic # 14 Polarization: 2.23 SS G_CDS: 2.07 Total: 4.30 kcal Total: -29.14 0.18 -28.96 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12060300_4974302.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.588 kcal (2) G-P(sol) polarization free energy of solvation -29.136 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.724 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.177 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.959 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.548 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds