Wall clock time and date at job start Tue Mar 9 2021 13:05:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35895 * 116.99520 * 2 1 4 4 C 1.38620 * 120.02383 * 179.97438 * 3 2 1 5 5 C 1.38654 * 119.88568 * 179.77256 * 4 3 2 6 6 O 1.35902 * 120.02568 * 180.27397 * 5 4 3 7 7 C 1.42903 * 117.00127 * 0.23653 * 6 5 4 8 8 C 1.50697 * 109.47556 * 179.97438 * 7 6 5 9 9 O 1.21285 * 119.99425 * 0.02562 * 8 7 6 10 10 N 1.34768 * 120.00298 * 179.97438 * 8 7 6 11 11 C 1.46500 * 120.00492 * 180.02562 * 10 8 7 12 12 H 1.09007 * 112.84717 * 23.80322 * 11 10 8 13 13 C 1.53776 * 113.61830 * 155.00006 * 11 10 8 14 14 C 1.53780 * 87.08382 * 139.98138 * 13 11 10 15 15 H 1.08996 * 113.61248 * 89.11275 * 14 13 11 16 16 O 1.42897 * 113.61917 * 220.01907 * 14 13 11 17 17 C 1.35890 * 117.00164 * 202.11285 * 16 14 13 18 18 C 1.38739 * 120.05762 * 173.77988 * 17 16 14 19 19 C 1.38143 * 119.94573 * 179.74548 * 18 17 16 20 20 C 1.38268 * 120.05566 * 0.50379 * 19 18 17 21 21 C 1.38256 * 120.10985 * 359.77279 * 20 19 18 22 22 C 1.38148 * 120.06016 * 359.97438 * 21 20 19 23 23 C 1.53775 * 113.61324 * 252.50165 * 11 10 8 24 24 C 1.38752 * 119.95077 * 0.50587 * 5 4 3 25 25 C 1.50701 * 119.97464 * 179.76895 * 24 5 4 26 26 O 1.42901 * 109.46871 * 74.72410 * 25 24 5 27 27 Si 1.86298 * 109.46897 * 194.72596 * 25 24 5 28 28 C 1.38194 * 120.04936 * 359.49575 * 24 5 4 29 29 C 1.38156 * 120.11178 * 0.25389 * 28 24 5 30 30 H 1.09000 * 109.47450 * 299.99878 * 1 2 3 31 31 H 1.09000 * 109.47779 * 59.99835 * 1 2 3 32 32 H 1.08999 * 109.47133 * 179.97438 * 1 2 3 33 33 H 1.07997 * 120.05275 * 0.04753 * 4 3 2 34 34 H 1.09003 * 109.46591 * 300.00022 * 7 6 5 35 35 H 1.09001 * 109.47218 * 59.99423 * 7 6 5 36 36 H 0.97001 * 120.00059 * 359.97438 * 10 8 7 37 37 H 1.09004 * 113.61429 * 254.53257 * 13 11 10 38 38 H 1.09003 * 113.61429 * 25.43300 * 13 11 10 39 39 H 1.08008 * 120.02251 * 359.97438 * 18 17 16 40 40 H 1.08003 * 119.97051 * 180.27848 * 19 18 17 41 41 H 1.07995 * 119.94134 * 179.74754 * 20 19 18 42 42 H 1.08001 * 119.97317 * 179.97438 * 21 20 19 43 43 H 1.07994 * 120.03030 * 179.97438 * 22 21 20 44 44 H 1.09005 * 113.61974 * 334.55759 * 23 11 10 45 45 H 1.08998 * 113.61881 * 105.46433 * 23 11 10 46 46 H 1.09004 * 109.47008 * 314.72477 * 25 24 5 47 47 H 0.96704 * 113.99131 * 179.97438 * 26 25 24 48 48 H 1.48506 * 109.99962 * 178.68262 * 27 25 24 49 49 H 1.48499 * 110.00158 * 299.99768 * 27 25 24 50 50 H 1.08006 * 119.94540 * 180.22786 * 28 24 5 51 51 H 1.08003 * 119.96893 * 180.02562 * 29 28 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0458 1.2109 0.0000 4 6 3.4301 1.2841 0.0005 5 6 4.0565 2.5211 -0.0042 6 8 5.4134 2.5962 -0.0094 7 6 6.1316 1.3607 -0.0148 8 6 7.6124 1.6404 -0.0206 9 8 8.0132 2.7850 -0.0196 10 7 8.4911 0.6186 -0.0257 11 6 9.9307 0.8904 -0.0308 12 1 10.1776 1.8713 0.3754 13 6 10.7752 -0.2511 0.5594 14 6 11.7852 0.0183 -0.5685 15 1 12.5401 0.7610 -0.3104 16 8 12.3439 -1.1698 -1.1327 17 6 13.5351 -1.0467 -1.7748 18 6 14.1974 -2.1764 -2.2331 19 6 15.4058 -2.0482 -2.8903 20 6 15.9603 -0.7963 -3.0823 21 6 15.3050 0.3306 -2.6215 22 6 14.0939 0.2083 -1.9683 23 6 10.6094 0.5907 -1.3777 24 6 3.2969 3.6822 0.0011 25 6 3.9772 5.0270 0.0012 26 8 4.5039 5.2944 -1.3001 27 14 2.7434 6.3470 0.4551 28 6 1.9171 3.6065 0.0006 29 6 1.2905 2.3752 0.0001 30 1 -0.3634 0.5138 0.8900 31 1 -0.3635 0.5138 -0.8899 32 1 -0.3633 -1.0277 -0.0005 33 1 4.0196 0.3792 0.0002 34 1 5.8733 0.7866 0.8751 35 1 5.8664 0.7902 -0.9049 36 1 8.1705 -0.2969 -0.0253 37 1 11.1646 -0.0366 1.5547 38 1 10.2965 -1.2281 0.4926 39 1 13.7668 -3.1549 -2.0794 40 1 15.9195 -2.9270 -3.2512 41 1 16.9070 -0.6985 -3.5927 42 1 15.7403 1.3074 -2.7723 43 1 13.5827 1.0888 -1.6082 44 1 10.0853 -0.1562 -1.9742 45 1 10.8649 1.4847 -1.9465 46 1 4.7894 5.0232 0.7282 47 1 4.9564 6.1458 -1.3738 48 1 3.4091 7.6740 0.4898 49 1 1.6310 6.3624 -0.5285 50 1 1.3275 4.5114 0.0010 51 1 0.2119 2.3187 -0.0007 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12060300_4974312.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:32 Heat of formation + Delta-G solvation = -77.067402 kcal Electronic energy + Delta-G solvation = -34224.199955 eV Core-core repulsion = 29444.176874 eV Total energy + Delta-G solvation = -4780.023081 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.165 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -41.91285 -41.61014 -40.82775 -39.98203 -39.27333 -38.26195 -37.46773 -37.08587 -34.50113 -32.40889 -31.96295 -31.47025 -30.74374 -29.57306 -28.36863 -26.91516 -26.08243 -25.96062 -23.92958 -23.51978 -22.86465 -22.38809 -21.76795 -20.90299 -19.91802 -19.51172 -18.56836 -18.44497 -17.97112 -17.51921 -17.47888 -17.23865 -16.88596 -16.80248 -16.66314 -16.55544 -16.42045 -15.94039 -15.62904 -15.54268 -15.41589 -15.24664 -15.10964 -14.73179 -14.38299 -14.14055 -14.02607 -13.79564 -13.70785 -13.59847 -13.52012 -13.37817 -13.21057 -12.79827 -12.64280 -12.51694 -12.43158 -12.37877 -12.34249 -12.00035 -11.76113 -11.70051 -11.61684 -11.42834 -11.04834 -10.41297 -10.25046 -9.98922 -9.71588 -9.19259 -9.11669 -4.94818 0.17991 0.29065 0.35448 0.44938 1.29984 1.35464 1.36701 1.58278 1.90702 2.13539 2.26821 2.51965 2.61351 2.80283 3.26256 3.34004 3.46599 3.51585 3.63945 3.68796 3.70820 3.87033 3.88059 3.94481 3.96213 4.02658 4.04755 4.16681 4.18054 4.29233 4.29759 4.36577 4.42335 4.44873 4.46563 4.50532 4.54737 4.60482 4.60999 4.72281 4.78251 4.78960 4.86361 4.94585 4.99448 5.05324 5.21515 5.28312 5.31286 5.36719 5.44929 5.45760 5.58379 5.83013 6.09772 6.33074 6.38723 6.43361 6.59389 7.03914 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.328 6.328 3 C 0.165 3.835 4 C -0.251 4.251 5 C 0.176 3.824 6 O -0.302 6.302 7 C 0.033 3.967 8 C 0.518 3.482 9 O -0.565 6.565 10 N -0.698 5.698 11 C 0.128 3.872 12 H 0.110 0.890 13 C -0.122 4.122 14 C 0.053 3.947 15 H 0.112 0.888 16 O -0.310 6.310 17 C 0.111 3.889 18 C -0.170 4.170 19 C -0.087 4.087 20 C -0.168 4.168 21 C -0.090 4.090 22 C -0.219 4.219 23 C -0.167 4.167 24 C -0.161 4.161 25 C -0.080 4.080 26 O -0.557 6.557 27 Si 0.778 3.222 28 C -0.042 4.042 29 C -0.238 4.238 30 H 0.072 0.928 31 H 0.065 0.935 32 H 0.118 0.882 33 H 0.156 0.844 34 H 0.128 0.872 35 H 0.117 0.883 36 H 0.422 0.578 37 H 0.100 0.900 38 H 0.113 0.887 39 H 0.135 0.865 40 H 0.148 0.852 41 H 0.141 0.859 42 H 0.141 0.859 43 H 0.138 0.862 44 H 0.098 0.902 45 H 0.072 0.928 46 H 0.068 0.932 47 H 0.388 0.612 48 H -0.290 1.290 49 H -0.281 1.281 50 H 0.151 0.849 51 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.570 -4.560 3.465 6.277 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.242 6.242 3 C 0.118 3.882 4 C -0.270 4.270 5 C 0.130 3.870 6 O -0.214 6.214 7 C -0.045 4.045 8 C 0.305 3.695 9 O -0.443 6.443 10 N -0.352 5.352 11 C 0.023 3.977 12 H 0.128 0.872 13 C -0.160 4.160 14 C -0.004 4.004 15 H 0.129 0.871 16 O -0.224 6.224 17 C 0.067 3.933 18 C -0.189 4.189 19 C -0.104 4.104 20 C -0.186 4.186 21 C -0.108 4.108 22 C -0.238 4.238 23 C -0.206 4.206 24 C -0.162 4.162 25 C -0.188 4.188 26 O -0.366 6.366 27 Si 0.682 3.318 28 C -0.060 4.060 29 C -0.257 4.257 30 H 0.090 0.910 31 H 0.083 0.917 32 H 0.136 0.864 33 H 0.174 0.826 34 H 0.145 0.855 35 H 0.135 0.865 36 H 0.260 0.740 37 H 0.118 0.882 38 H 0.131 0.869 39 H 0.153 0.847 40 H 0.166 0.834 41 H 0.159 0.841 42 H 0.159 0.841 43 H 0.156 0.844 44 H 0.116 0.884 45 H 0.091 0.909 46 H 0.086 0.914 47 H 0.237 0.763 48 H -0.218 1.218 49 H -0.208 1.208 50 H 0.168 0.832 51 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -2.860 -3.815 3.147 5.713 hybrid contribution 0.801 0.202 -1.094 1.371 sum -2.059 -3.613 2.053 4.638 Atomic orbital electron populations 1.23413 0.75999 1.05767 1.02685 1.86053 1.23765 1.26413 1.87925 1.18851 0.91685 0.84928 0.92688 1.20556 0.93398 0.97394 1.15677 1.18552 0.81806 0.93117 0.93524 1.86187 1.15353 1.31673 1.88166 1.22759 0.88493 0.86545 1.06715 1.20431 0.88420 0.85216 0.75482 1.90757 1.80681 1.23074 1.49802 1.45572 1.05348 1.09660 1.74571 1.22100 0.78781 1.00135 0.96718 0.87250 1.23537 0.94411 0.99691 0.98354 1.23963 0.94099 0.86938 0.95360 0.87082 1.86116 1.32940 1.35353 1.67994 1.19246 0.85782 0.94450 0.93867 1.20726 0.96854 0.97609 1.03663 1.21316 0.94180 0.98756 0.96195 1.21425 1.01745 0.92554 1.02857 1.21297 0.93972 0.99945 0.95581 1.21487 0.99348 0.96661 1.06300 1.24046 0.96791 1.01814 0.97946 1.18755 0.93127 0.92374 1.11919 1.24972 1.04735 1.01737 0.87315 1.86561 1.76386 1.42799 1.30887 0.94176 0.76615 0.73637 0.87388 1.20900 0.92093 0.98796 0.94167 1.21383 1.01664 0.91150 1.11466 0.90989 0.91651 0.86403 0.82602 0.85490 0.86522 0.73988 0.88174 0.86911 0.84676 0.83417 0.84141 0.84138 0.84407 0.88386 0.90922 0.91375 0.76307 1.21757 1.20830 0.83155 0.82421 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.33 -0.56 10.49 -92.37 -0.97 -1.53 16 3 C 0.16 0.53 6.68 22.49 0.15 0.68 16 4 C -0.25 -0.87 8.97 22.46 0.20 -0.67 16 5 C 0.18 1.26 6.66 22.49 0.15 1.41 16 6 O -0.30 -2.61 9.00 -73.41 -0.66 -3.27 16 7 C 0.03 -0.01 5.22 71.23 0.37 0.36 16 8 C 0.52 1.99 7.91 87.66 0.69 2.68 16 9 O -0.57 -8.23 16.10 15.99 0.26 -7.97 16 10 N -0.70 2.33 5.35 -440.06 -2.36 -0.02 16 11 C 0.13 -0.26 4.24 45.51 0.19 -0.07 16 12 H 0.11 0.15 7.46 -2.38 -0.02 0.14 16 13 C -0.12 0.64 7.66 31.12 0.24 0.87 16 14 C 0.05 -0.07 3.63 31.12 0.11 0.04 16 15 H 0.11 -0.31 6.04 -2.39 -0.01 -0.32 16 16 O -0.31 -1.11 10.15 -92.31 -0.94 -2.05 16 17 C 0.11 0.54 6.68 22.51 0.15 0.69 16 18 C -0.17 -0.66 9.99 22.37 0.22 -0.43 16 19 C -0.09 -0.14 10.04 22.25 0.22 0.08 16 20 C -0.17 -0.24 10.04 22.28 0.22 -0.01 16 21 C -0.09 -0.17 10.04 22.25 0.22 0.05 16 22 C -0.22 -0.67 9.01 22.37 0.20 -0.47 16 23 C -0.17 0.16 7.71 31.12 0.24 0.40 16 24 C -0.16 -1.14 5.31 -19.75 -0.10 -1.24 16 25 C -0.08 -0.52 2.36 71.24 0.17 -0.36 16 26 O -0.56 -5.65 12.86 -148.98 -1.92 -7.56 16 27 Si 0.78 0.91 30.19 68.60 2.07 2.98 16 28 C -0.04 -0.13 8.65 22.24 0.19 0.06 16 29 C -0.24 -0.30 9.04 22.38 0.20 -0.10 16 30 H 0.07 -0.56 7.66 -2.39 -0.02 -0.58 16 31 H 0.06 -0.44 7.66 -2.39 -0.02 -0.46 16 32 H 0.12 -1.03 8.14 -2.39 -0.02 -1.05 16 33 H 0.16 -0.25 6.30 -2.91 -0.02 -0.27 16 34 H 0.13 -0.86 7.65 -2.39 -0.02 -0.88 16 35 H 0.12 -0.56 7.67 -2.39 -0.02 -0.58 16 36 H 0.42 -4.32 8.73 -92.71 -0.81 -5.13 16 37 H 0.10 -0.68 8.14 -2.38 -0.02 -0.70 16 38 H 0.11 -0.80 8.12 -2.39 -0.02 -0.82 16 39 H 0.14 0.23 8.06 -2.91 -0.02 0.21 16 40 H 0.15 -0.45 8.06 -2.91 -0.02 -0.47 16 41 H 0.14 -0.37 8.06 -2.91 -0.02 -0.39 16 42 H 0.14 -0.30 8.06 -2.91 -0.02 -0.32 16 43 H 0.14 -0.01 5.95 -2.91 -0.02 -0.02 16 44 H 0.10 -0.07 8.14 -2.38 -0.02 -0.09 16 45 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 46 H 0.07 0.48 7.83 -2.38 -0.02 0.46 16 47 H 0.39 1.07 8.74 -74.05 -0.65 0.43 16 48 H -0.29 -1.66 7.11 99.48 0.71 -0.95 16 49 H -0.28 -1.48 6.75 99.48 0.67 -0.80 16 50 H 0.15 -0.08 4.89 -2.91 -0.01 -0.09 16 51 H 0.16 -0.67 6.29 -2.91 -0.02 -0.68 16 Total: 0.00 -27.96 423.45 0.20 -27.76 By element: Atomic # 1 Polarization: -12.87 SS G_CDS: -0.46 Total: -13.33 kcal Atomic # 6 Polarization: -0.16 SS G_CDS: 5.17 Total: 5.01 kcal Atomic # 7 Polarization: 2.33 SS G_CDS: -2.36 Total: -0.02 kcal Atomic # 8 Polarization: -18.16 SS G_CDS: -4.22 Total: -22.39 kcal Atomic # 14 Polarization: 0.91 SS G_CDS: 2.07 Total: 2.98 kcal Total: -27.96 0.20 -27.76 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12060300_4974312.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.307 kcal (2) G-P(sol) polarization free energy of solvation -27.957 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.264 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.196 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.760 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.067 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds