Wall clock time and date at job start Tue Mar 9 2021 13:05:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.37634 * 125.67539 * 2 1 4 4 C 1.46672 * 126.22688 * 359.97438 * 3 2 1 5 5 O 1.21700 * 119.99746 * 353.94020 * 4 3 2 6 6 N 1.34780 * 120.00198 * 173.94892 * 4 3 2 7 7 C 1.46499 * 119.99797 * 185.03726 * 6 4 3 8 8 H 1.08997 * 112.90868 * 23.73938 * 7 6 4 9 9 C 1.53781 * 113.61300 * 154.99904 * 7 6 4 10 10 C 1.53779 * 87.08140 * 139.97860 * 9 7 6 11 11 H 1.09002 * 113.61947 * 89.19904 * 10 9 7 12 12 O 1.42902 * 113.61262 * 220.01588 * 10 9 7 13 13 C 1.35900 * 116.99878 * 202.45813 * 12 10 9 14 14 C 1.38735 * 120.05347 * 173.88109 * 13 12 10 15 15 C 1.38144 * 119.94665 * 180.27345 * 14 13 12 16 16 C 1.38266 * 120.05249 * 0.02562 * 15 14 13 17 17 C 1.38268 * 120.11098 * 359.97438 * 16 15 14 18 18 C 1.38141 * 120.05541 * 359.97438 * 17 16 15 19 19 C 1.53776 * 87.08203 * 334.56549 * 10 9 7 20 20 C 1.37891 * 107.54894 * 179.71715 * 3 2 1 21 21 C 1.39873 * 107.08929 * 0.26060 * 20 3 2 22 22 Br 1.89101 * 126.06962 * 180.02562 * 21 20 3 23 23 C 1.35507 * 107.85612 * 0.02562 * 21 20 3 24 24 C 1.50703 * 125.56846 * 179.97438 * 23 21 20 25 25 O 1.42897 * 109.46867 * 299.39317 * 24 23 21 26 26 Si 1.86296 * 109.47024 * 59.39732 * 24 23 21 27 27 H 1.09000 * 109.46800 * 92.89678 * 1 2 3 28 28 H 1.08998 * 109.47204 * 212.89103 * 1 2 3 29 29 H 1.08998 * 109.46997 * 332.89421 * 1 2 3 30 30 H 0.96994 * 119.99892 * 5.03078 * 6 4 3 31 31 H 1.08997 * 113.61407 * 25.42557 * 9 7 6 32 32 H 1.09003 * 113.61242 * 254.52177 * 9 7 6 33 33 H 1.08002 * 120.03107 * 0.24768 * 14 13 12 34 34 H 1.08001 * 119.97488 * 180.02562 * 15 14 13 35 35 H 1.07994 * 119.94529 * 180.02562 * 16 15 14 36 36 H 1.08001 * 119.96905 * 180.02562 * 17 16 15 37 37 H 1.08000 * 120.02383 * 180.02562 * 18 17 16 38 38 H 1.08994 * 113.61793 * 139.98217 * 19 10 9 39 39 H 1.09003 * 113.61195 * 270.88720 * 19 10 9 40 40 H 1.07998 * 126.45437 * 180.24476 * 20 3 2 41 41 H 1.09001 * 109.46308 * 179.39665 * 24 23 21 42 42 H 0.96703 * 114.00328 * 60.00665 * 25 24 23 43 43 H 1.48499 * 110.00177 * 63.69324 * 26 24 23 44 44 H 1.48505 * 109.99866 * 185.00878 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5122 -0.0005 5 8 0.6269 2.7650 -0.1123 6 7 2.7059 3.5134 0.1226 7 6 2.2432 4.8990 0.2331 8 1 1.2236 4.9770 0.6104 9 6 3.2386 5.8254 0.9513 10 6 2.8768 6.8942 -0.0936 11 1 2.0313 7.5186 0.1952 12 8 3.9987 7.6543 -0.5470 13 6 3.7405 8.8780 -1.0787 14 6 4.7873 9.7214 -1.4216 15 6 4.5223 10.9672 -1.9567 16 6 3.2150 11.3738 -2.1501 17 6 2.1700 10.5351 -1.8091 18 6 2.4299 9.2880 -1.2747 19 6 2.4977 5.7361 -1.0316 20 6 3.5781 0.6891 0.0065 21 6 3.5528 -0.7094 0.0043 22 35 5.0609 -1.8503 0.0116 23 6 2.2558 -1.1015 -0.0038 24 6 1.7714 -2.5286 -0.0093 25 8 2.2512 -3.1899 -1.1816 26 14 2.4098 -3.4068 1.5046 27 1 -0.3633 -0.0519 -1.0264 28 1 -0.3633 -0.8629 0.5581 29 1 -0.3633 0.9148 0.4682 30 1 3.6556 3.3165 0.1381 31 1 4.2728 5.4868 0.8896 32 1 2.9376 6.0871 1.9657 33 1 5.8086 9.4046 -1.2700 34 1 5.3368 11.6239 -2.2242 35 1 3.0098 12.3479 -2.5689 36 1 1.1497 10.8549 -1.9615 37 1 1.6132 8.6331 -1.0089 38 1 1.5986 5.9256 -1.6180 39 1 3.3294 5.3731 -1.6354 40 1 4.4582 1.3150 0.0119 41 1 0.6815 -2.5422 -0.0047 42 1 3.2153 -3.2157 -1.2520 43 1 1.8465 -2.7833 2.7289 44 1 2.0412 -4.8444 1.4511 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12060300_5000100.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:36 Heat of formation + Delta-G solvation = 15.218016 kcal Electronic energy + Delta-G solvation = -28987.172455 eV Core-core repulsion = 24727.035400 eV Total energy + Delta-G solvation = -4260.137055 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.057 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.91244 -41.61988 -40.52951 -39.25161 -37.96663 -37.45478 -35.00497 -34.12764 -32.19871 -31.91409 -31.04397 -30.67726 -27.55567 -27.43590 -26.88116 -25.66456 -23.77851 -23.43966 -22.71032 -21.52508 -21.14998 -20.39940 -19.49049 -19.04761 -18.23427 -17.70120 -17.29616 -16.95322 -16.79161 -16.49764 -16.38743 -16.04447 -15.86534 -15.48618 -15.42850 -15.11773 -14.86622 -14.64136 -14.39053 -14.36244 -14.14709 -14.11770 -13.86786 -13.58150 -13.55143 -13.25773 -12.77952 -12.67890 -12.61793 -12.38851 -12.36813 -12.32083 -12.00642 -11.69353 -11.50178 -11.40043 -11.16485 -10.91950 -10.27838 -9.96982 -9.85218 -9.34630 -9.16924 -5.04475 0.09450 0.37441 0.46940 0.48723 0.87121 1.16197 1.43003 1.53691 1.81266 2.05721 2.08321 2.41806 2.82290 3.13669 3.28649 3.37207 3.38251 3.52755 3.64122 3.67518 3.71648 3.80267 3.90163 3.98281 4.10445 4.18437 4.24913 4.31229 4.35543 4.47889 4.49594 4.54179 4.56717 4.64210 4.65634 4.74700 4.81254 4.89203 4.97002 5.07241 5.24474 5.33731 5.40115 5.47537 5.55068 5.60288 5.74153 5.85001 6.33287 6.33925 6.45835 6.97685 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.057 3.943 2 N -0.398 5.398 3 C -0.057 4.057 4 C 0.593 3.407 5 O -0.575 6.575 6 N -0.690 5.690 7 C 0.131 3.869 8 H 0.115 0.885 9 C -0.124 4.124 10 C 0.053 3.947 11 H 0.113 0.887 12 O -0.310 6.310 13 C 0.112 3.888 14 C -0.170 4.170 15 C -0.087 4.087 16 C -0.168 4.168 17 C -0.090 4.090 18 C -0.219 4.219 19 C -0.166 4.166 20 C -0.093 4.093 21 C -0.184 4.184 22 Br 0.025 6.975 23 C 0.049 3.951 24 C -0.055 4.055 25 O -0.541 6.541 26 Si 0.727 3.273 27 H 0.086 0.914 28 H 0.102 0.898 29 H 0.101 0.899 30 H 0.419 0.581 31 H 0.111 0.889 32 H 0.100 0.900 33 H 0.135 0.865 34 H 0.147 0.853 35 H 0.140 0.860 36 H 0.141 0.859 37 H 0.140 0.860 38 H 0.075 0.925 39 H 0.096 0.904 40 H 0.186 0.814 41 H 0.124 0.876 42 H 0.387 0.613 43 H -0.275 1.275 44 H -0.263 1.263 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.123 1.810 1.672 3.978 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.071 5.071 3 C -0.171 4.171 4 C 0.381 3.619 5 O -0.456 6.456 6 N -0.341 5.341 7 C 0.026 3.974 8 H 0.133 0.867 9 C -0.162 4.162 10 C -0.003 4.003 11 H 0.131 0.869 12 O -0.224 6.224 13 C 0.067 3.933 14 C -0.189 4.189 15 C -0.105 4.105 16 C -0.187 4.187 17 C -0.108 4.108 18 C -0.237 4.237 19 C -0.205 4.205 20 C -0.120 4.120 21 C -0.270 4.270 22 Br 0.109 6.891 23 C -0.073 4.073 24 C -0.165 4.165 25 O -0.348 6.348 26 Si 0.628 3.372 27 H 0.105 0.895 28 H 0.120 0.880 29 H 0.120 0.880 30 H 0.257 0.743 31 H 0.130 0.870 32 H 0.119 0.881 33 H 0.153 0.847 34 H 0.165 0.835 35 H 0.158 0.842 36 H 0.159 0.841 37 H 0.157 0.843 38 H 0.093 0.907 39 H 0.115 0.885 40 H 0.203 0.797 41 H 0.141 0.859 42 H 0.238 0.762 43 H -0.201 1.201 44 H -0.188 1.188 Dipole moment (debyes) X Y Z Total from point charges 1.784 0.974 2.243 3.027 hybrid contribution -0.832 0.478 -0.547 1.104 sum 0.952 1.453 1.697 2.428 Atomic orbital electron populations 1.22490 0.74683 1.06118 1.05003 1.43947 1.07653 1.04189 1.51309 1.20146 0.90466 0.87625 1.18816 1.16995 0.85432 0.83781 0.75654 1.90805 1.17764 1.85111 1.51934 1.45419 1.10278 1.05203 1.73217 1.22145 0.99789 0.78587 0.96840 0.86745 1.23555 1.01251 0.92516 0.98875 1.23971 0.89263 0.90667 0.96432 0.86946 1.86124 1.35237 1.26506 1.74549 1.19239 0.94024 0.85278 0.94749 1.20722 0.98676 0.94527 1.04961 1.21309 0.97851 0.95036 0.96297 1.21423 0.92767 1.01302 1.03158 1.21298 1.00461 0.93030 0.96010 1.21484 0.95680 0.99495 1.07057 1.24035 1.02846 0.95644 0.97948 1.21540 0.95457 0.92912 1.02083 1.20851 0.91099 0.95231 1.19803 1.96632 1.34381 1.60874 1.97257 1.21072 0.90037 0.90003 1.06142 1.24875 1.03300 0.88166 1.00122 1.86518 1.28631 1.77381 1.42309 0.93172 0.93508 0.77712 0.72843 0.89538 0.87969 0.88049 0.74268 0.87043 0.88110 0.84720 0.83505 0.84219 0.84124 0.84259 0.90667 0.88546 0.79695 0.85885 0.76229 1.20084 1.18838 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.04 10.18 127.77 1.30 1.34 16 2 N -0.40 -1.28 3.16 -519.61 -1.64 -2.92 16 3 C -0.06 -0.13 6.88 40.35 0.28 0.14 16 4 C 0.59 1.93 7.77 86.44 0.67 2.60 16 5 O -0.57 -5.55 14.33 -4.35 -0.06 -5.61 16 6 N -0.69 2.19 5.34 -443.99 -2.37 -0.18 16 7 C 0.13 -0.45 4.21 45.52 0.19 -0.26 16 8 H 0.11 -0.13 7.53 -2.39 -0.02 -0.15 16 9 C -0.12 0.75 7.66 31.12 0.24 0.99 16 10 C 0.05 -0.14 3.65 31.12 0.11 -0.02 16 11 H 0.11 -0.47 6.02 -2.39 -0.01 -0.49 16 12 O -0.31 -0.86 10.15 -92.43 -0.94 -1.80 16 13 C 0.11 0.46 6.68 22.50 0.15 0.61 16 14 C -0.17 -0.57 9.99 22.37 0.22 -0.35 16 15 C -0.09 -0.11 10.04 22.25 0.22 0.12 16 16 C -0.17 -0.15 10.04 22.28 0.22 0.07 16 17 C -0.09 -0.10 10.04 22.25 0.22 0.12 16 18 C -0.22 -0.46 9.01 22.36 0.20 -0.26 16 19 C -0.17 0.37 7.71 31.12 0.24 0.61 16 20 C -0.09 0.14 10.34 22.58 0.23 0.38 16 21 C -0.18 -0.01 6.05 22.03 0.13 0.13 16 22 Br 0.02 -0.08 29.51 -20.37 -0.60 -0.68 16 23 C 0.05 0.10 5.40 41.35 0.22 0.33 16 24 C -0.05 -0.07 2.82 71.24 0.20 0.14 16 25 O -0.54 -1.59 12.88 -148.98 -1.92 -3.51 16 26 Si 0.73 0.42 30.22 68.60 2.07 2.50 16 27 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 28 H 0.10 -0.38 7.12 -2.39 -0.02 -0.39 16 29 H 0.10 0.29 6.29 -2.39 -0.02 0.27 16 30 H 0.42 -3.55 7.63 -92.71 -0.71 -4.26 16 31 H 0.11 -0.84 8.12 -2.39 -0.02 -0.86 16 32 H 0.10 -0.78 8.14 -2.39 -0.02 -0.80 16 33 H 0.13 0.17 8.06 -2.91 -0.02 0.15 16 34 H 0.15 -0.49 8.06 -2.91 -0.02 -0.51 16 35 H 0.14 -0.42 8.06 -2.91 -0.02 -0.45 16 36 H 0.14 -0.41 8.06 -2.91 -0.02 -0.44 16 37 H 0.14 -0.18 5.95 -2.91 -0.02 -0.20 16 38 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 39 H 0.10 -0.14 8.14 -2.39 -0.02 -0.16 16 40 H 0.19 -1.52 7.45 -2.91 -0.02 -1.54 16 41 H 0.12 -0.05 6.55 -2.39 -0.02 -0.06 16 42 H 0.39 -0.64 6.69 -74.06 -0.50 -1.14 16 43 H -0.28 -1.43 7.11 99.48 0.71 -0.72 16 44 H -0.26 -1.33 7.11 99.48 0.71 -0.62 16 Total: 0.00 -17.48 382.42 -0.49 -17.97 By element: Atomic # 1 Polarization: -12.33 SS G_CDS: -0.10 Total: -12.43 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: 5.07 Total: 6.67 kcal Atomic # 7 Polarization: 0.91 SS G_CDS: -4.01 Total: -3.10 kcal Atomic # 8 Polarization: -8.00 SS G_CDS: -2.92 Total: -10.92 kcal Atomic # 14 Polarization: 0.42 SS G_CDS: 2.07 Total: 2.50 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -0.60 Total: -0.68 kcal Total: -17.48 -0.49 -17.97 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12060300_5000100.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.185 kcal (2) G-P(sol) polarization free energy of solvation -17.476 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.709 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.491 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.967 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.218 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds