Wall clock time and date at job start Tue Mar 9 2021 14:41:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37642 * 125.68024 * 2 1 4 4 C 1.46672 * 126.22281 * 0.02562 * 3 2 1 5 5 O 1.21695 * 120.00040 * 5.31193 * 4 3 2 6 6 N 1.34778 * 120.00257 * 185.31618 * 4 3 2 7 7 C 1.46497 * 120.00361 * 185.04745 * 6 4 3 8 8 H 1.08994 * 112.84865 * 23.80313 * 7 6 4 9 9 C 1.53774 * 113.61417 * 155.00053 * 7 6 4 10 10 C 1.53782 * 87.08405 * 139.97978 * 9 7 6 11 11 H 1.08998 * 113.61093 * 89.19701 * 10 9 7 12 12 N 1.46496 * 113.61544 * 220.01722 * 10 9 7 13 13 C 1.34774 * 119.99715 * 204.99932 * 12 10 9 14 14 O 1.21512 * 120.00285 * 359.97438 * 13 12 10 15 15 O 1.34639 * 120.00008 * 180.02562 * 13 12 10 16 16 C 1.45207 * 117.00375 * 180.02562 * 15 13 12 17 17 C 1.50697 * 109.47051 * 179.97438 * 16 15 13 18 18 C 1.38236 * 119.99647 * 269.72223 * 17 16 15 19 19 C 1.38246 * 119.99287 * 179.79013 * 18 17 16 20 20 C 1.38234 * 119.99942 * 0.44448 * 19 18 17 21 21 C 1.38231 * 120.00146 * 359.81126 * 20 19 18 22 22 C 1.38228 * 120.00143 * 359.97438 * 21 20 19 23 23 C 1.53779 * 87.07931 * 334.56744 * 10 9 7 24 24 C 1.37881 * 107.55009 * 180.25581 * 3 2 1 25 25 C 1.39880 * 107.09271 * 359.74346 * 24 3 2 26 26 Br 1.89098 * 126.07106 * 179.97438 * 25 24 3 27 27 C 1.35507 * 107.85297 * 359.97438 * 25 24 3 28 28 C 1.50693 * 125.57085 * 180.02562 * 27 25 24 29 29 O 1.42898 * 109.46831 * 237.04386 * 28 27 25 30 30 Si 1.86297 * 109.47232 * 117.04069 * 28 27 25 31 31 H 1.09001 * 109.46908 * 271.24379 * 1 2 3 32 32 H 1.09002 * 109.47061 * 31.24232 * 1 2 3 33 33 H 1.09000 * 109.47499 * 151.24330 * 1 2 3 34 34 H 0.97003 * 119.99185 * 5.04727 * 6 4 3 35 35 H 1.09003 * 113.61890 * 254.53047 * 9 7 6 36 36 H 1.09007 * 113.61902 * 25.43110 * 9 7 6 37 37 H 0.96998 * 120.00610 * 24.99810 * 12 10 9 38 38 H 1.08997 * 109.47005 * 299.99861 * 16 15 13 39 39 H 1.08997 * 109.46944 * 59.99377 * 16 15 13 40 40 H 1.07989 * 120.00350 * 0.02562 * 18 17 16 41 41 H 1.07999 * 119.99656 * 180.27602 * 19 18 17 42 42 H 1.07998 * 119.99407 * 179.83316 * 20 19 18 43 43 H 1.08004 * 119.99977 * 180.02562 * 21 20 19 44 44 H 1.08003 * 119.99762 * 179.97438 * 22 21 20 45 45 H 1.08996 * 113.61411 * 270.88293 * 23 10 9 46 46 H 1.08997 * 113.61665 * 139.97921 * 23 10 9 47 47 H 1.08005 * 126.45462 * 179.77343 * 24 3 2 48 48 H 1.09003 * 109.47238 * 357.04144 * 28 27 25 49 49 H 0.96710 * 113.99818 * 179.97438 * 29 28 27 50 50 H 1.48495 * 110.00469 * 299.33950 * 30 28 27 51 51 H 1.48506 * 109.99534 * 60.65905 * 30 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1180 0.0000 4 6 1.8122 2.5122 0.0005 5 8 0.6258 2.7646 0.0986 6 7 2.7075 3.5138 -0.1077 7 6 2.2660 4.9062 0.0038 8 1 1.3358 5.0119 0.5619 9 6 3.3734 5.8686 0.4643 10 6 2.8154 6.8743 -0.5566 11 1 2.0359 7.5199 -0.1522 12 7 3.8530 7.6172 -1.2760 13 6 3.5754 8.8284 -1.7978 14 8 2.4643 9.3040 -1.6720 15 8 4.5288 9.5110 -2.4594 16 6 4.1592 10.8094 -2.9942 17 6 5.3450 11.4199 -3.6956 18 6 6.2247 12.2231 -2.9941 19 6 7.3150 12.7795 -3.6365 20 6 7.5204 12.5403 -4.9824 21 6 6.6377 11.7415 -5.6850 22 6 5.5500 11.1814 -5.0417 23 6 2.2730 5.6637 -1.3346 24 6 3.5781 0.6890 -0.0059 25 6 3.5528 -0.7096 -0.0034 26 35 5.0609 -1.8504 -0.0098 27 6 2.2557 -1.1016 0.0043 28 6 1.7712 -2.5285 0.0098 29 8 0.9181 -2.7462 -1.1157 30 14 0.8238 -2.8566 1.5800 31 1 -0.3633 0.0223 1.0274 32 1 -0.3633 0.8786 -0.5330 33 1 -0.3634 -0.9009 -0.4944 34 1 3.6442 3.3126 -0.2593 35 1 3.2674 6.1930 1.4995 36 1 4.3795 5.5210 0.2296 37 1 4.7399 7.2375 -1.3768 38 1 3.3393 10.6905 -3.7025 39 1 3.8439 11.4615 -2.1796 40 1 6.0623 12.4127 -1.9434 41 1 8.0047 13.4034 -3.0875 42 1 8.3706 12.9773 -5.4849 43 1 6.7984 11.5542 -6.7365 44 1 4.8602 10.5576 -5.5908 45 1 2.9782 5.2600 -2.0611 46 1 1.2786 5.8226 -1.7516 47 1 4.4583 1.3149 -0.0109 48 1 2.6259 -3.2027 -0.0464 49 1 0.5688 -3.6459 -1.1762 50 1 1.7045 -2.6491 2.7575 51 1 -0.3531 -1.9545 1.6608 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12109458_5000100.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:41:03 Heat of formation + Delta-G solvation = -31.313728 kcal Electronic energy + Delta-G solvation = -35978.154367 eV Core-core repulsion = 30892.590062 eV Total energy + Delta-G solvation = -5085.564305 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 464.083 amu Computer time = 1.54 seconds Orbital eigenvalues (eV) -42.95994 -41.83557 -40.97103 -40.14463 -39.40312 -37.75495 -37.51627 -35.68664 -34.65119 -33.93631 -33.02548 -32.13920 -31.88751 -31.03533 -27.89603 -27.51166 -27.29544 -26.84766 -25.27325 -23.58001 -23.35125 -22.60321 -22.20003 -21.61186 -21.50744 -20.47347 -19.73758 -18.81963 -18.57352 -18.47478 -17.81383 -17.68682 -17.36902 -17.08986 -16.98258 -16.31515 -16.11455 -16.09327 -16.03713 -15.91772 -15.43180 -15.06643 -14.74999 -14.72537 -14.50380 -14.48008 -14.37888 -14.28452 -14.24714 -13.95553 -13.89197 -13.68920 -13.56470 -13.37549 -13.34849 -12.81776 -12.51988 -12.47921 -12.17626 -12.14602 -12.11431 -12.08379 -11.98139 -11.76909 -11.74458 -11.41712 -11.17241 -10.66282 -10.38686 -10.19032 -9.91113 -9.90571 -9.90430 -9.38163 -5.14101 0.03377 0.08204 0.41493 0.52236 0.87977 1.15832 1.23688 1.40444 1.53806 1.60804 1.85987 2.02669 2.17117 2.75426 3.08956 3.18097 3.27382 3.41620 3.48005 3.59106 3.67376 3.68618 3.73552 3.75961 3.82260 3.98344 4.04620 4.05317 4.18047 4.20800 4.24466 4.25025 4.36627 4.43307 4.46906 4.54353 4.54675 4.59720 4.61795 4.65411 4.81533 4.83330 4.95252 4.95597 5.06784 5.14594 5.19187 5.30837 5.43018 5.47235 5.50461 5.51999 5.54525 5.70224 5.99357 6.26692 6.32511 6.76461 6.95295 7.19253 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.400 5.400 3 C -0.055 4.055 4 C 0.591 3.409 5 O -0.575 6.575 6 N -0.687 5.687 7 C 0.128 3.872 8 H 0.107 0.893 9 C -0.129 4.129 10 C 0.139 3.861 11 H 0.108 0.892 12 N -0.680 5.680 13 C 0.644 3.356 14 O -0.607 6.607 15 O -0.366 6.366 16 C 0.130 3.870 17 C -0.114 4.114 18 C -0.105 4.105 19 C -0.131 4.131 20 C -0.114 4.114 21 C -0.131 4.131 22 C -0.106 4.106 23 C -0.163 4.163 24 C -0.100 4.100 25 C -0.178 4.178 26 Br -0.009 7.009 27 C 0.077 3.923 28 C -0.058 4.058 29 O -0.557 6.557 30 Si 0.774 3.226 31 H 0.075 0.925 32 H 0.096 0.904 33 H 0.111 0.889 34 H 0.420 0.580 35 H 0.099 0.901 36 H 0.125 0.875 37 H 0.422 0.578 38 H 0.079 0.921 39 H 0.081 0.919 40 H 0.134 0.866 41 H 0.143 0.857 42 H 0.144 0.856 43 H 0.143 0.857 44 H 0.132 0.868 45 H 0.104 0.896 46 H 0.063 0.937 47 H 0.187 0.813 48 H 0.107 0.893 49 H 0.411 0.589 50 H -0.296 1.296 51 H -0.274 1.274 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.080 -4.141 -0.025 6.554 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.073 5.073 3 C -0.169 4.169 4 C 0.379 3.621 5 O -0.456 6.456 6 N -0.338 5.338 7 C 0.023 3.977 8 H 0.125 0.875 9 C -0.167 4.167 10 C 0.035 3.965 11 H 0.126 0.874 12 N -0.339 5.339 13 C 0.397 3.603 14 O -0.499 6.499 15 O -0.280 6.280 16 C 0.056 3.944 17 C -0.114 4.114 18 C -0.123 4.123 19 C -0.148 4.148 20 C -0.132 4.132 21 C -0.149 4.149 22 C -0.124 4.124 23 C -0.203 4.203 24 C -0.127 4.127 25 C -0.264 4.264 26 Br 0.075 6.925 27 C -0.044 4.044 28 C -0.168 4.168 29 O -0.368 6.368 30 Si 0.676 3.324 31 H 0.093 0.907 32 H 0.114 0.886 33 H 0.130 0.870 34 H 0.258 0.742 35 H 0.118 0.882 36 H 0.143 0.857 37 H 0.260 0.740 38 H 0.097 0.903 39 H 0.099 0.901 40 H 0.152 0.848 41 H 0.161 0.839 42 H 0.162 0.838 43 H 0.160 0.840 44 H 0.150 0.850 45 H 0.122 0.878 46 H 0.081 0.919 47 H 0.205 0.795 48 H 0.125 0.875 49 H 0.264 0.736 50 H -0.223 1.223 51 H -0.200 1.200 Dipole moment (debyes) X Y Z Total from point charges 3.724 -3.082 0.704 4.885 hybrid contribution 0.419 0.547 -0.436 0.815 sum 4.143 -2.535 0.268 4.864 Atomic orbital electron populations 1.22557 0.74858 1.06461 1.04036 1.43955 1.07578 1.04397 1.51352 1.20247 0.90405 0.87872 1.18359 1.16987 0.85532 0.83754 0.75826 1.90819 1.17586 1.85091 1.52144 1.45402 1.11576 1.04668 1.72178 1.22229 0.99661 0.78373 0.97471 0.87501 1.23735 0.99878 0.92751 1.00350 1.22300 0.90545 0.90646 0.93036 0.87375 1.44563 1.16950 1.15389 1.57011 1.18437 0.82216 0.82272 0.77395 1.91004 1.23784 1.70589 1.64490 1.86314 1.41111 1.33373 1.67174 1.21781 0.95268 0.79610 0.97715 1.19556 0.97302 1.00066 0.94482 1.21325 0.94034 0.96480 1.00451 1.21487 0.97806 1.00205 0.95351 1.21617 0.99559 0.97325 0.94669 1.21476 0.94575 0.97623 1.01227 1.21313 0.98172 0.98918 0.93979 1.24034 1.02565 0.95599 0.98075 1.21581 0.95516 0.92902 1.02668 1.21004 0.91355 0.95198 1.18844 1.96664 1.34895 1.62780 1.98188 1.20105 0.89391 0.88967 1.05939 1.24483 1.00430 0.90372 1.01485 1.86409 1.66109 1.38523 1.45745 0.94749 0.77512 0.88211 0.71904 0.90655 0.88580 0.87044 0.74156 0.88206 0.85730 0.73983 0.90293 0.90093 0.84848 0.83872 0.83830 0.83960 0.85028 0.87783 0.91851 0.79536 0.87503 0.73585 1.22301 1.20023 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.32 8.60 127.77 1.10 1.42 16 2 N -0.40 -2.64 3.12 -519.62 -1.62 -4.26 16 3 C -0.05 -0.28 6.88 40.35 0.28 0.00 16 4 C 0.59 3.13 7.77 86.44 0.67 3.80 16 5 O -0.58 -7.11 14.41 -4.33 -0.06 -7.17 16 6 N -0.69 1.92 5.33 -444.02 -2.37 -0.45 16 7 C 0.13 -0.39 4.21 45.52 0.19 -0.20 16 8 H 0.11 0.12 7.53 -2.39 -0.02 0.10 16 9 C -0.13 1.08 7.58 31.12 0.24 1.32 16 10 C 0.14 -0.36 4.24 45.52 0.19 -0.17 16 11 H 0.11 0.17 7.46 -2.39 -0.02 0.15 16 12 N -0.68 1.09 5.36 -567.62 -3.04 -1.96 16 13 C 0.64 4.04 8.75 129.79 1.14 5.17 16 14 O -0.61 -8.24 15.73 19.80 0.31 -7.93 16 15 O -0.37 -1.89 10.25 -55.48 -0.57 -2.46 16 16 C 0.13 0.52 5.60 71.24 0.40 0.92 16 17 C -0.11 -0.34 5.52 -19.87 -0.11 -0.45 16 18 C -0.10 -0.16 9.70 22.27 0.22 0.05 16 19 C -0.13 0.02 10.05 22.27 0.22 0.24 16 20 C -0.11 0.07 10.05 22.27 0.22 0.29 16 21 C -0.13 -0.01 10.05 22.27 0.22 0.21 16 22 C -0.11 -0.20 9.70 22.27 0.22 0.02 16 23 C -0.16 0.32 7.68 31.12 0.24 0.56 16 24 C -0.10 -0.14 10.33 22.58 0.23 0.09 16 25 C -0.18 -0.73 6.53 22.04 0.14 -0.58 16 26 Br -0.01 -0.02 33.05 -20.37 -0.67 -0.69 16 27 C 0.08 0.38 5.16 41.34 0.21 0.59 16 28 C -0.06 0.06 2.78 71.23 0.20 0.26 16 29 O -0.56 1.56 11.40 -148.98 -1.70 -0.14 16 30 Si 0.77 -1.96 31.38 68.60 2.15 0.19 16 31 H 0.07 0.42 7.26 -2.39 -0.02 0.40 16 32 H 0.10 0.72 6.52 -2.39 -0.02 0.70 16 33 H 0.11 0.26 6.07 -2.39 -0.01 0.24 16 34 H 0.42 -3.80 7.67 -92.71 -0.71 -4.51 16 35 H 0.10 -0.90 8.14 -2.39 -0.02 -0.92 16 36 H 0.12 -1.68 8.10 -2.38 -0.02 -1.70 16 37 H 0.42 -3.05 8.84 -92.71 -0.82 -3.87 16 38 H 0.08 0.32 8.08 -2.39 -0.02 0.30 16 39 H 0.08 0.30 8.08 -2.39 -0.02 0.28 16 40 H 0.13 -0.15 8.06 -2.92 -0.02 -0.17 16 41 H 0.14 -0.61 8.06 -2.91 -0.02 -0.63 16 42 H 0.14 -0.70 8.06 -2.91 -0.02 -0.73 16 43 H 0.14 -0.55 8.06 -2.91 -0.02 -0.58 16 44 H 0.13 -0.07 8.06 -2.91 -0.02 -0.09 16 45 H 0.10 -0.42 8.14 -2.39 -0.02 -0.44 16 46 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 47 H 0.19 -1.12 7.49 -2.91 -0.02 -1.14 16 48 H 0.11 -0.36 6.95 -2.39 -0.02 -0.38 16 49 H 0.41 -5.60 8.74 -74.05 -0.65 -6.25 16 50 H -0.30 -1.50 7.11 99.48 0.71 -0.79 16 51 H -0.27 -0.59 5.76 99.48 0.57 -0.02 16 Total: 0.00 -28.62 447.55 -2.60 -31.22 By element: Atomic # 1 Polarization: -18.64 SS G_CDS: -1.25 Total: -19.89 kcal Atomic # 6 Polarization: 7.32 SS G_CDS: 6.22 Total: 13.55 kcal Atomic # 7 Polarization: 0.36 SS G_CDS: -7.03 Total: -6.67 kcal Atomic # 8 Polarization: -15.68 SS G_CDS: -2.02 Total: -17.70 kcal Atomic # 14 Polarization: -1.96 SS G_CDS: 2.15 Total: 0.19 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -0.67 Total: -0.69 kcal Total: -28.62 -2.60 -31.22 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12109458_5000100.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.098 kcal (2) G-P(sol) polarization free energy of solvation -28.619 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.717 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.597 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.216 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.314 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.54 seconds