Wall clock time and date at job start Tue Mar 9 2021 14:41:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50690 * 1 3 3 C 1.33821 * 122.45205 * 2 1 4 4 C 1.50697 * 124.51896 * 0.02562 * 3 2 1 5 5 O 1.42897 * 109.47298 * 329.99267 * 4 3 2 6 6 Si 1.86309 * 109.46940 * 209.99664 * 4 3 2 7 7 S 1.70612 * 110.95572 * 180.02562 * 3 2 1 8 8 C 1.75825 * 91.56583 * 0.02562 * 7 3 2 9 9 C 1.46588 * 125.45962 * 179.97438 * 8 7 3 10 10 O 1.21703 * 120.00052 * 180.02562 * 9 8 7 11 11 N 1.34770 * 119.99855 * 0.02943 * 9 8 7 12 12 C 1.46508 * 119.99842 * 180.02562 * 11 9 8 13 13 H 1.08999 * 112.84358 * 333.04868 * 12 11 9 14 14 C 1.53772 * 113.61641 * 104.35746 * 12 11 9 15 15 C 1.53782 * 87.08047 * 89.11730 * 14 12 11 16 16 H 1.09002 * 113.69586 * 139.99322 * 15 14 12 17 17 N 1.46509 * 113.61246 * 270.88392 * 15 14 12 18 18 C 1.34778 * 119.99957 * 182.66471 * 17 15 14 19 19 O 1.21511 * 119.99698 * 359.97438 * 18 17 15 20 20 O 1.34629 * 119.99972 * 180.02562 * 18 17 15 21 21 C 1.45201 * 116.99889 * 179.97438 * 20 18 17 22 22 C 1.50702 * 109.46939 * 179.97438 * 21 20 18 23 23 C 1.38238 * 120.00203 * 269.72647 * 22 21 20 24 24 C 1.38235 * 119.99642 * 179.78891 * 23 22 21 25 25 C 1.38228 * 120.00457 * 0.44132 * 24 23 22 26 26 C 1.38235 * 120.00144 * 359.81698 * 25 24 23 27 27 C 1.38238 * 119.99870 * 90.00285 * 22 21 20 28 28 C 1.53775 * 87.08134 * 25.43032 * 15 14 12 29 29 C 1.36650 * 109.08158 * 0.26320 * 8 7 3 30 30 H 1.08996 * 109.47299 * 89.99874 * 1 2 3 31 31 H 1.08996 * 109.47465 * 210.00055 * 1 2 3 32 32 H 1.09005 * 109.46870 * 329.99821 * 1 2 3 33 33 H 1.09001 * 109.47168 * 89.99897 * 4 3 2 34 34 H 0.96698 * 113.99992 * 180.02562 * 5 4 3 35 35 H 1.48496 * 109.99968 * 298.68429 * 6 4 3 36 36 H 1.48502 * 109.99720 * 60.00063 * 6 4 3 37 37 H 0.97000 * 120.00512 * 359.97438 * 11 9 8 38 38 H 1.09003 * 113.61349 * 203.66282 * 14 12 11 39 39 H 1.08998 * 113.61843 * 334.57031 * 14 12 11 40 40 H 0.96998 * 120.00021 * 2.66130 * 17 15 14 41 41 H 1.08993 * 109.47573 * 299.99573 * 21 20 18 42 42 H 1.09001 * 109.46850 * 60.00180 * 21 20 18 43 43 H 1.07997 * 119.99901 * 0.02562 * 23 22 21 44 44 H 1.08006 * 119.99690 * 180.27753 * 24 23 22 45 45 H 1.08000 * 120.00688 * 179.83366 * 25 24 23 46 46 H 1.07997 * 120.00799 * 179.97438 * 26 25 24 47 47 H 1.08003 * 120.00021 * 359.97438 * 27 22 21 48 48 H 1.09004 * 113.61737 * 220.02049 * 28 15 14 49 49 H 1.09001 * 113.61633 * 89.11903 * 28 15 14 50 50 H 1.08007 * 123.34862 * 179.71514 * 29 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6355 2.5161 0.0006 5 8 0.3752 2.4983 -0.6727 6 14 2.7922 3.6829 -0.8778 7 16 3.8969 0.7892 -0.0007 8 6 3.5937 -0.9427 -0.0018 9 6 4.6231 -1.9863 -0.0033 10 8 4.3001 -3.1597 -0.0045 11 7 5.9272 -1.6463 -0.0034 12 6 6.9561 -2.6893 -0.0055 13 1 6.6160 -3.6201 0.4485 14 6 7.6368 -2.8804 -1.3711 15 6 8.6478 -1.8094 -0.9288 16 1 9.6747 -2.0292 -1.2208 17 7 8.2406 -0.4430 -1.2660 18 6 9.0570 0.5921 -0.9856 19 8 10.1305 0.3920 -0.4526 20 8 8.6825 1.8477 -1.2950 21 6 9.6115 2.9132 -0.9635 22 6 9.0265 4.2377 -1.3812 23 6 9.2759 4.7353 -2.6466 24 6 8.7356 5.9482 -3.0311 25 6 7.9535 6.6679 -2.1473 26 6 7.7085 6.1729 -0.8800 27 6 8.2451 4.9578 -0.4969 28 6 8.3199 -2.2102 0.5191 29 6 2.2446 -1.1600 -0.0075 30 1 -0.3634 0.0000 -1.0276 31 1 -0.3634 -0.8899 0.5138 32 1 -0.3633 0.8900 0.5139 33 1 1.4937 2.8502 1.0284 34 1 -0.0626 3.3596 -0.7109 35 1 4.0961 3.7347 -0.1691 36 1 2.9938 3.2383 -2.2803 37 1 6.1847 -0.7111 -0.0029 38 1 8.0777 -3.8683 -1.5048 39 1 7.0176 -2.5745 -2.2143 40 1 7.3835 -0.2834 -1.6912 41 1 9.7907 2.9177 0.1116 42 1 10.5530 2.7506 -1.4882 43 1 9.8896 4.1746 -3.3360 44 1 8.9267 6.3349 -4.0213 45 1 7.5336 7.6167 -2.4467 46 1 7.0978 6.7352 -0.1893 47 1 8.0536 4.5710 0.4931 48 1 8.2520 -1.3633 1.2020 49 1 8.9475 -3.0149 0.9023 50 1 1.8019 -2.1452 -0.0137 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12109458_6739946.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:41:35 Heat of formation + Delta-G solvation = -49.449238 kcal Electronic energy + Delta-G solvation = -35647.863005 eV Core-core repulsion = 30927.682306 eV Total energy + Delta-G solvation = -4720.180700 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 403.133 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -42.05678 -41.13462 -40.30914 -39.96066 -39.24242 -37.48852 -37.30546 -35.07392 -34.03227 -33.04817 -32.16691 -31.96203 -30.23832 -27.82905 -27.08817 -26.96334 -25.40959 -24.29943 -23.65205 -22.92753 -22.27855 -21.73437 -21.06174 -19.99474 -19.82031 -19.22440 -18.49850 -18.23087 -17.73531 -17.46435 -17.36599 -17.10825 -16.48503 -16.41781 -16.30840 -16.17674 -16.00368 -15.72297 -15.56155 -14.95541 -14.74357 -14.61758 -14.50070 -14.43753 -14.39486 -14.18814 -13.98843 -13.72794 -13.53024 -13.35888 -13.27847 -13.08882 -13.04387 -12.90587 -12.56074 -12.26826 -12.21252 -12.19809 -12.14478 -11.97356 -11.69329 -11.65496 -11.56876 -11.16372 -10.73822 -10.43596 -10.21635 -9.97005 -9.95290 -9.72339 -9.44225 -5.32518 -0.67117 0.04416 0.24035 0.35528 0.62465 0.99914 1.14654 1.32662 1.45395 1.72067 1.81414 1.89810 2.10538 2.67765 3.11532 3.13544 3.15639 3.36598 3.54869 3.59461 3.67084 3.70806 3.72237 3.92999 3.96053 4.08905 4.09477 4.14406 4.22084 4.25175 4.36318 4.44773 4.45193 4.51376 4.56660 4.58093 4.60900 4.65423 4.75150 4.79373 4.86613 4.88301 4.91341 4.97620 5.02993 5.11482 5.25200 5.38286 5.39760 5.43007 5.46811 5.47499 5.48030 5.90987 6.19538 6.25429 6.41716 7.00739 7.22890 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C -0.084 4.084 3 C -0.194 4.194 4 C -0.033 4.033 5 O -0.536 6.536 6 Si 0.666 3.334 7 S 0.181 5.819 8 C -0.266 4.266 9 C 0.597 3.403 10 O -0.518 6.518 11 N -0.714 5.714 12 C 0.118 3.882 13 H 0.113 0.887 14 C -0.152 4.152 15 C 0.136 3.864 16 H 0.105 0.895 17 N -0.699 5.699 18 C 0.649 3.351 19 O -0.562 6.562 20 O -0.366 6.366 21 C 0.130 3.870 22 C -0.103 4.103 23 C -0.093 4.093 24 C -0.123 4.123 25 C -0.106 4.106 26 C -0.124 4.124 27 C -0.094 4.094 28 C -0.155 4.155 29 C -0.042 4.042 30 H 0.074 0.926 31 H 0.060 0.940 32 H 0.081 0.919 33 H 0.085 0.915 34 H 0.384 0.616 35 H -0.236 1.236 36 H -0.240 1.240 37 H 0.396 0.604 38 H 0.117 0.883 39 H 0.082 0.918 40 H 0.405 0.595 41 H 0.082 0.918 42 H 0.083 0.917 43 H 0.125 0.875 44 H 0.127 0.873 45 H 0.127 0.873 46 H 0.127 0.873 47 H 0.124 0.876 48 H 0.080 0.920 49 H 0.115 0.885 50 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.242 6.370 -0.311 6.760 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.097 4.097 3 C -0.313 4.313 4 C -0.145 4.145 5 O -0.343 6.343 6 Si 0.564 3.436 7 S 0.448 5.552 8 C -0.386 4.386 9 C 0.384 3.616 10 O -0.395 6.395 11 N -0.366 5.366 12 C 0.013 3.987 13 H 0.131 0.869 14 C -0.191 4.191 15 C 0.032 3.968 16 H 0.123 0.877 17 N -0.360 5.360 18 C 0.402 3.598 19 O -0.450 6.450 20 O -0.280 6.280 21 C 0.056 3.944 22 C -0.103 4.103 23 C -0.111 4.111 24 C -0.141 4.141 25 C -0.124 4.124 26 C -0.142 4.142 27 C -0.112 4.112 28 C -0.194 4.194 29 C -0.075 4.075 30 H 0.093 0.907 31 H 0.079 0.921 32 H 0.099 0.901 33 H 0.103 0.897 34 H 0.232 0.768 35 H -0.160 1.160 36 H -0.164 1.164 37 H 0.232 0.768 38 H 0.135 0.865 39 H 0.100 0.900 40 H 0.240 0.760 41 H 0.100 0.900 42 H 0.101 0.899 43 H 0.143 0.857 44 H 0.145 0.855 45 H 0.145 0.855 46 H 0.145 0.855 47 H 0.142 0.858 48 H 0.098 0.902 49 H 0.133 0.867 50 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 0.366 5.857 -0.528 5.892 hybrid contribution -1.569 -0.597 0.099 1.682 sum -1.203 5.260 -0.428 5.413 Atomic orbital electron populations 1.20527 0.88210 1.02679 1.03004 1.18745 0.98787 0.90203 1.01941 1.23231 0.97876 0.98866 1.11322 1.23962 0.92956 0.96192 1.01392 1.86570 1.32479 1.36279 1.78946 0.95098 0.79755 0.87187 0.81515 1.83069 1.03145 0.99134 1.69806 1.24574 0.98056 0.96620 1.19309 1.16912 0.81406 0.87439 0.75882 1.90864 1.81461 1.17990 1.49214 1.45680 1.05150 1.09757 1.76062 1.22007 0.87277 0.92368 0.97036 0.86888 1.23796 0.97361 0.99615 0.98329 1.21944 0.99955 0.78844 0.96091 0.87730 1.44524 1.21816 1.04301 1.65313 1.18091 0.83024 0.80934 0.77796 1.91040 1.22393 1.84942 1.46577 1.86309 1.49258 1.14455 1.78011 1.21770 0.90476 0.80617 1.01504 1.19496 1.00843 0.94744 0.95254 1.21129 0.98924 0.96023 0.95018 1.21221 0.97854 0.94978 1.00054 1.21316 0.97504 0.99833 0.93772 1.21215 1.00183 0.96055 0.96740 1.21124 0.95756 0.94852 0.99507 1.23802 0.95672 1.02835 0.97095 1.20778 0.90814 1.00248 0.95641 0.90731 0.92100 0.90053 0.89728 0.76753 1.16000 1.16370 0.76838 0.86464 0.89966 0.75965 0.89956 0.89920 0.85678 0.85488 0.85540 0.85482 0.85762 0.90160 0.86725 0.82397 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.06 8.70 36.00 0.31 0.26 16 2 C -0.08 -0.18 5.75 -106.46 -0.61 -0.79 16 3 C -0.19 -0.30 5.57 -35.86 -0.20 -0.50 16 4 C -0.03 0.04 2.75 36.00 0.10 0.14 16 5 O -0.54 0.93 9.81 -35.23 -0.35 0.59 16 6 Si 0.67 -1.16 31.31 -169.99 -5.32 -6.48 16 7 S 0.18 0.23 19.79 -107.50 -2.13 -1.90 16 8 C -0.27 -0.74 6.45 -36.79 -0.24 -0.97 16 9 C 0.60 2.06 7.78 -12.90 -0.10 1.96 16 10 O -0.52 -3.38 16.48 5.19 0.09 -3.29 16 11 N -0.71 -0.58 4.96 -54.35 -0.27 -0.85 16 12 C 0.12 -0.04 4.28 -67.12 -0.29 -0.32 16 13 H 0.11 0.07 7.54 -51.93 -0.39 -0.32 16 14 C -0.15 0.26 7.57 -25.92 -0.20 0.07 16 15 C 0.14 -0.11 4.00 -67.12 -0.27 -0.38 16 16 H 0.10 -0.04 8.05 -51.93 -0.42 -0.46 16 17 N -0.70 -0.05 4.34 -57.93 -0.25 -0.30 16 18 C 0.65 1.69 8.75 54.06 0.47 2.17 16 19 O -0.56 -3.05 16.07 -19.28 -0.31 -3.36 16 20 O -0.37 -0.76 10.25 -40.29 -0.41 -1.18 16 21 C 0.13 0.14 5.60 36.01 0.20 0.34 16 22 C -0.10 -0.09 5.52 -104.62 -0.58 -0.67 16 23 C -0.09 -0.04 9.70 -39.58 -0.38 -0.42 16 24 C -0.12 0.02 10.05 -39.59 -0.40 -0.37 16 25 C -0.11 0.05 10.05 -39.59 -0.40 -0.34 16 26 C -0.12 0.05 10.05 -39.58 -0.40 -0.35 16 27 C -0.09 -0.03 9.70 -39.58 -0.38 -0.42 16 28 C -0.15 0.17 7.61 -25.92 -0.20 -0.03 16 29 C -0.04 -0.11 9.80 -40.43 -0.40 -0.51 16 30 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 31 H 0.06 0.00 8.13 -51.93 -0.42 -0.43 16 32 H 0.08 0.02 6.41 -51.93 -0.33 -0.31 16 33 H 0.09 -0.24 7.96 -51.93 -0.41 -0.66 16 34 H 0.38 -2.53 8.74 45.56 0.40 -2.13 16 35 H -0.24 -0.02 7.11 56.52 0.40 0.38 16 36 H -0.24 -0.46 7.11 56.52 0.40 -0.06 16 37 H 0.40 -0.05 6.30 -40.82 -0.26 -0.31 16 38 H 0.12 -0.38 8.14 -51.93 -0.42 -0.80 16 39 H 0.08 -0.10 8.13 -51.93 -0.42 -0.52 16 40 H 0.40 -0.43 7.93 -40.82 -0.32 -0.75 16 41 H 0.08 0.05 8.08 -51.93 -0.42 -0.37 16 42 H 0.08 0.06 8.08 -51.93 -0.42 -0.36 16 43 H 0.13 -0.10 8.06 -52.49 -0.42 -0.53 16 44 H 0.13 -0.25 8.06 -52.48 -0.42 -0.67 16 45 H 0.13 -0.31 8.06 -52.49 -0.42 -0.74 16 46 H 0.13 -0.30 8.06 -52.49 -0.42 -0.72 16 47 H 0.12 -0.12 8.06 -52.48 -0.42 -0.55 16 48 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 49 H 0.11 -0.28 8.14 -51.93 -0.42 -0.71 16 50 H 0.16 0.35 8.06 -52.48 -0.42 -0.08 16 LS Contribution 433.17 15.07 6.53 6.53 Total: 0.00 -9.99 433.17 -13.22 -23.22 By element: Atomic # 1 Polarization: -4.98 SS G_CDS: -6.85 Total: -11.82 kcal Atomic # 6 Polarization: 2.80 SS G_CDS: -3.95 Total: -1.15 kcal Atomic # 7 Polarization: -0.63 SS G_CDS: -0.52 Total: -1.15 kcal Atomic # 8 Polarization: -6.26 SS G_CDS: -0.98 Total: -7.24 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.32 Total: -6.48 kcal Atomic # 16 Polarization: 0.23 SS G_CDS: -2.13 Total: -1.90 kcal Total LS contribution 6.53 Total: 6.53 kcal Total: -9.99 -13.22 -23.22 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12109458_6739946.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.234 kcal (2) G-P(sol) polarization free energy of solvation -9.994 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.222 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.216 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.449 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds