Wall clock time and date at job start Tue Mar 9 2021 14:42:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34225 * 117.00006 * 2 1 4 4 O 1.20817 * 120.00508 * 359.97438 * 3 2 1 5 5 C 1.50704 * 119.99775 * 180.02562 * 3 2 1 6 6 H 1.09005 * 112.84948 * 311.18808 * 5 3 2 7 7 C 1.53950 * 113.67061 * 82.43760 * 5 3 2 8 8 C 1.53778 * 87.02187 * 139.93342 * 7 5 3 9 9 H 1.09000 * 113.61271 * 89.23177 * 8 7 5 10 10 N 1.46503 * 113.61370 * 220.04782 * 8 7 5 11 11 C 1.46507 * 119.99656 * 39.13791 * 10 8 7 12 12 C 1.34777 * 120.00043 * 219.13475 * 10 8 7 13 13 O 1.21568 * 119.99735 * 4.42266 * 12 10 8 14 14 C 1.47694 * 119.99807 * 184.42314 * 12 10 8 15 15 C 1.39808 * 120.15537 * 131.03367 * 14 12 10 16 16 F 1.35097 * 120.07996 * 359.97438 * 15 14 12 17 17 C 1.38307 * 119.83059 * 180.25438 * 15 14 12 18 18 C 1.38184 * 120.14924 * 359.44335 * 17 15 14 19 19 C 1.50696 * 119.84588 * 180.25563 * 18 17 15 20 20 O 1.42896 * 109.47456 * 255.30004 * 19 18 17 21 21 Si 1.86300 * 109.47052 * 15.30157 * 19 18 17 22 22 C 1.38654 * 120.31149 * 0.55854 * 18 17 15 23 23 F 1.35103 * 119.91622 * 179.69869 * 22 18 17 24 24 C 1.38067 * 120.16845 * 359.72286 * 22 18 17 25 25 C 1.53778 * 87.17264 * 334.63764 * 8 7 5 26 26 H 1.08997 * 109.47184 * 300.00709 * 1 2 3 27 27 H 1.08998 * 109.46440 * 59.99907 * 1 2 3 28 28 H 1.08995 * 109.47211 * 179.97438 * 1 2 3 29 29 H 1.09007 * 113.61159 * 25.40644 * 7 5 3 30 30 H 1.08999 * 113.66843 * 254.46413 * 7 5 3 31 31 H 1.08997 * 109.46672 * 273.04134 * 11 10 8 32 32 H 1.08993 * 109.47188 * 33.04631 * 11 10 8 33 33 H 1.09002 * 109.46713 * 153.04917 * 11 10 8 34 34 H 1.08003 * 119.92398 * 179.71693 * 17 15 14 35 35 H 1.08998 * 109.46904 * 135.29675 * 19 18 17 36 36 H 0.96704 * 114.00173 * 60.00179 * 20 19 18 37 37 H 1.48493 * 110.00135 * 179.97438 * 21 19 18 38 38 H 1.48498 * 109.99920 * 301.32054 * 21 19 18 39 39 H 1.07998 * 120.07839 * 180.02562 * 24 22 18 40 40 H 1.09003 * 113.61450 * 139.93608 * 25 8 7 41 41 H 1.08993 * 113.61889 * 270.75935 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4035 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 1 4.0240 0.6361 0.7551 7 6 4.1928 1.1221 -1.3986 8 6 5.1808 2.2268 -0.9886 9 1 6.0813 1.8493 -0.5041 10 7 5.4695 3.1832 -2.0601 11 6 4.3972 3.6273 -2.9541 12 6 6.7216 3.6544 -2.2235 13 8 7.6270 3.2261 -1.5344 14 6 6.9937 4.6911 -3.2396 15 6 7.7263 5.8324 -2.8999 16 9 8.1875 5.9908 -1.6400 17 6 7.9726 6.8015 -3.8554 18 6 7.5064 6.6381 -5.1459 19 6 7.7837 7.6957 -6.1831 20 8 6.5954 8.4528 -6.4210 21 14 9.1297 8.8286 -5.5702 22 6 6.7793 5.5087 -5.4895 23 9 6.3221 5.3599 -6.7521 24 6 6.5208 4.5358 -4.5445 25 6 4.1079 2.7141 -0.0006 26 1 -0.3633 0.5139 0.8899 27 1 -0.3632 0.5139 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 3.5253 1.4122 -2.2101 30 1 4.6646 0.1534 -1.5632 31 1 4.3051 2.9289 -3.7859 32 1 3.4570 3.6631 -2.4039 33 1 4.6318 4.6202 -3.3377 34 1 8.5345 7.6859 -3.5934 35 1 8.1034 7.2202 -7.1103 36 1 6.2533 8.9045 -5.6374 37 1 9.4130 9.8758 -6.5842 38 1 8.7191 9.4588 -4.2897 39 1 5.9546 3.6565 -4.8139 40 1 4.5113 3.0288 0.9619 41 1 3.4182 3.4415 -0.4286 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12109654_12360598.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:42:58 Heat of formation + Delta-G solvation = -162.294571 kcal Electronic energy + Delta-G solvation = -30115.268732 eV Core-core repulsion = 25407.077823 eV Total energy + Delta-G solvation = -4708.190908 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.116 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -50.21013 -50.10604 -42.21438 -41.42762 -40.21609 -39.19082 -37.78876 -37.49011 -35.83805 -33.26277 -31.44229 -29.57704 -28.31503 -28.11116 -26.90179 -26.54488 -24.43406 -24.01232 -22.57424 -21.20241 -20.28627 -19.47594 -19.01165 -18.77362 -18.64657 -18.14041 -17.83042 -17.57016 -17.43092 -16.98316 -16.72756 -16.53323 -16.36766 -16.20360 -16.04699 -15.92840 -15.46145 -15.31783 -14.86993 -14.47508 -14.33240 -14.26998 -14.11092 -13.84384 -13.67199 -13.51244 -13.31892 -13.16885 -12.98643 -12.87019 -12.53466 -12.39046 -12.26507 -11.92336 -11.86198 -11.78320 -11.46084 -11.26248 -10.76241 -10.50424 -9.93568 -9.80137 -4.94934 -0.72914 -0.33274 1.03588 1.16293 1.22301 1.50297 1.53786 1.82288 1.90858 2.02402 2.74644 2.81917 3.03875 3.15360 3.25666 3.29643 3.34249 3.48352 3.59440 3.71062 3.75314 3.97301 4.04833 4.18908 4.25664 4.27970 4.30794 4.38109 4.44156 4.46941 4.48059 4.55229 4.57352 4.67198 4.68417 4.69719 4.73102 4.83702 4.88286 5.06445 5.29663 5.34454 5.39055 6.04527 6.40445 6.63227 6.77950 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.473 3.527 4 O -0.537 6.537 5 C -0.104 4.104 6 H 0.152 0.848 7 C -0.118 4.118 8 C 0.120 3.880 9 H 0.123 0.877 10 N -0.590 5.590 11 C 0.057 3.943 12 C 0.562 3.438 13 O -0.556 6.556 14 C -0.139 4.139 15 C 0.132 3.868 16 F -0.131 7.131 17 C -0.124 4.124 18 C -0.095 4.095 19 C -0.086 4.086 20 O -0.539 6.539 21 Si 0.770 3.230 22 C 0.109 3.891 23 F -0.127 7.127 24 C -0.083 4.083 25 C -0.132 4.132 26 H 0.059 0.941 27 H 0.062 0.938 28 H 0.128 0.872 29 H 0.099 0.901 30 H 0.108 0.892 31 H 0.087 0.913 32 H 0.083 0.917 33 H 0.084 0.916 34 H 0.172 0.828 35 H 0.131 0.869 36 H 0.390 0.610 37 H -0.294 1.294 38 H -0.268 1.268 39 H 0.176 0.824 40 H 0.087 0.913 41 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.240 -2.468 -1.566 3.175 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.277 6.277 3 C 0.317 3.683 4 O -0.427 6.427 5 C -0.123 4.123 6 H 0.170 0.830 7 C -0.156 4.156 8 C 0.016 3.984 9 H 0.141 0.859 10 N -0.320 5.320 11 C -0.085 4.085 12 C 0.349 3.651 13 O -0.435 6.435 14 C -0.143 4.143 15 C 0.111 3.889 16 F -0.109 7.109 17 C -0.142 4.142 18 C -0.096 4.096 19 C -0.194 4.194 20 O -0.348 6.348 21 Si 0.674 3.326 22 C 0.090 3.910 23 F -0.105 7.105 24 C -0.102 4.102 25 C -0.171 4.171 26 H 0.078 0.922 27 H 0.081 0.919 28 H 0.146 0.854 29 H 0.117 0.883 30 H 0.126 0.874 31 H 0.105 0.895 32 H 0.101 0.899 33 H 0.103 0.897 34 H 0.189 0.811 35 H 0.149 0.851 36 H 0.240 0.760 37 H -0.222 1.222 38 H -0.194 1.194 39 H 0.193 0.807 40 H 0.106 0.894 41 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -0.731 -1.841 -1.592 2.541 hybrid contribution -1.551 0.485 0.435 1.683 sum -2.283 -1.356 -1.157 2.896 Atomic orbital electron populations 1.23527 0.75024 1.05605 1.02449 1.86522 1.24738 1.33051 1.83438 1.23918 0.92368 0.81034 0.70990 1.90670 1.67858 1.37430 1.46719 1.22431 0.86122 1.01004 1.02739 0.83014 1.23386 0.96947 1.00693 0.94551 1.22648 0.98261 0.89476 0.87973 0.85882 1.47727 1.08068 1.43710 1.32517 1.22323 0.90327 1.01574 0.94264 1.18196 0.82966 0.81396 0.82493 1.90838 1.45087 1.59743 1.47820 1.19703 1.03360 0.95769 0.95473 1.17659 0.96318 0.94669 0.80244 1.91574 1.86343 1.95396 1.37572 1.21077 1.01980 1.00198 0.90945 1.20412 0.97746 0.96203 0.95269 1.25281 0.95981 0.96213 1.01931 1.86658 1.41685 1.66665 1.39747 0.93799 0.82836 0.79305 0.76691 1.17319 0.98323 0.95301 0.80105 1.91573 1.86634 1.95618 1.36716 1.21350 0.99100 1.00011 0.89769 1.23442 0.97326 0.95138 1.01161 0.92184 0.91881 0.85395 0.88258 0.87396 0.89456 0.89878 0.89712 0.81061 0.85133 0.76008 1.22185 1.19401 0.80692 0.89430 0.88824 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.13 16 2 O -0.36 -0.39 10.57 -51.37 -0.54 -0.93 16 3 C 0.47 0.95 7.49 71.24 0.53 1.48 16 4 O -0.54 -4.39 15.65 21.99 0.34 -4.05 16 5 C -0.10 0.39 4.26 -10.95 -0.05 0.35 16 6 H 0.15 -1.16 8.14 -2.38 -0.02 -1.18 16 7 C -0.12 0.70 7.12 31.18 0.22 0.92 16 8 C 0.12 -0.26 4.22 45.52 0.19 -0.06 16 9 H 0.12 0.02 7.20 -2.39 -0.02 0.00 16 10 N -0.59 0.56 3.08 -823.22 -2.54 -1.98 16 11 C 0.06 -0.36 7.64 127.77 0.98 0.61 16 12 C 0.56 2.64 7.01 86.74 0.61 3.25 16 13 O -0.56 -7.05 16.12 -3.93 -0.06 -7.11 16 14 C -0.14 -0.16 4.90 -20.06 -0.10 -0.26 16 15 C 0.13 0.27 7.26 22.67 0.16 0.43 16 16 F -0.13 -0.92 16.51 44.97 0.74 -0.17 16 17 C -0.12 0.35 8.62 22.27 0.19 0.54 16 18 C -0.09 0.29 5.27 -19.78 -0.10 0.18 16 19 C -0.09 0.30 2.44 71.23 0.17 0.47 16 20 O -0.54 0.31 12.88 -148.98 -1.92 -1.61 16 21 Si 0.77 -3.91 30.25 68.60 2.07 -1.83 16 22 C 0.11 -0.20 7.23 22.33 0.16 -0.04 16 23 F -0.13 -0.12 16.73 44.97 0.75 0.63 16 24 C -0.08 0.27 7.59 22.57 0.17 0.44 16 25 C -0.13 0.25 6.95 31.12 0.22 0.47 16 26 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 27 H 0.06 -0.14 8.13 -2.39 -0.02 -0.16 16 28 H 0.13 -0.99 8.14 -2.39 -0.02 -1.01 16 29 H 0.10 -0.65 6.82 -2.38 -0.02 -0.67 16 30 H 0.11 -0.88 8.14 -2.39 -0.02 -0.90 16 31 H 0.09 -0.91 7.53 -2.39 -0.02 -0.92 16 32 H 0.08 -0.53 6.47 -2.39 -0.02 -0.54 16 33 H 0.08 -0.59 5.67 -2.39 -0.01 -0.60 16 34 H 0.17 -1.03 4.83 -2.91 -0.01 -1.05 16 35 H 0.13 -0.55 7.89 -2.39 -0.02 -0.57 16 36 H 0.39 -2.78 8.70 -74.05 -0.64 -3.42 16 37 H -0.29 -0.80 7.11 99.48 0.71 -0.09 16 38 H -0.27 0.75 6.67 99.48 0.66 1.41 16 39 H 0.18 -1.35 6.56 -2.91 -0.02 -1.37 16 40 H 0.09 -0.16 8.14 -2.39 -0.02 -0.18 16 41 H 0.09 0.03 6.08 -2.39 -0.01 0.02 16 Total: 0.00 -22.37 350.68 3.87 -18.50 By element: Atomic # 1 Polarization: -11.82 SS G_CDS: 0.46 Total: -11.36 kcal Atomic # 6 Polarization: 5.36 SS G_CDS: 4.56 Total: 9.92 kcal Atomic # 7 Polarization: 0.56 SS G_CDS: -2.54 Total: -1.98 kcal Atomic # 8 Polarization: -11.52 SS G_CDS: -2.18 Total: -13.70 kcal Atomic # 9 Polarization: -1.04 SS G_CDS: 1.49 Total: 0.46 kcal Atomic # 14 Polarization: -3.91 SS G_CDS: 2.07 Total: -1.83 kcal Total: -22.37 3.87 -18.50 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12109654_12360598.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -143.799 kcal (2) G-P(sol) polarization free energy of solvation -22.367 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -166.166 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.871 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.495 kcal (6) G-S(sol) free energy of system = (1) + (5) -162.295 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds