Wall clock time and date at job start Tue Mar 9 2021 14:44:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34226 * 117.00114 * 2 1 4 4 O 1.20830 * 119.99791 * 0.02562 * 3 2 1 5 5 C 1.50705 * 120.00297 * 179.97438 * 3 2 1 6 6 H 1.09000 * 112.84568 * 48.80543 * 5 3 2 7 7 C 1.53778 * 113.61660 * 180.02562 * 5 3 2 8 8 C 1.53773 * 87.08285 * 140.06450 * 7 5 3 9 9 H 1.09001 * 113.61464 * 89.19851 * 8 7 5 10 10 N 1.46498 * 113.61619 * 220.01775 * 8 7 5 11 11 C 1.46505 * 120.00024 * 53.86773 * 10 8 7 12 12 C 1.34777 * 120.00423 * 233.86575 * 10 8 7 13 13 O 1.21284 * 119.99808 * 0.02562 * 12 10 8 14 14 C 1.50699 * 120.00227 * 180.02562 * 12 10 8 15 15 C 1.53004 * 109.46743 * 180.02562 * 14 12 10 16 16 O 1.42904 * 109.46731 * 179.97438 * 15 14 12 17 17 C 1.35900 * 117.00026 * 179.97438 * 16 15 14 18 18 C 1.38711 * 120.05872 * 179.73213 * 17 16 15 19 19 C 1.38159 * 119.94558 * 179.77009 * 18 17 16 20 20 C 1.50704 * 119.97301 * 180.22860 * 19 18 17 21 21 O 1.42900 * 109.46775 * 65.25270 * 20 19 18 22 22 Si 1.86300 * 109.46950 * 185.25136 * 20 19 18 23 23 C 1.38249 * 120.05837 * 0.47816 * 19 18 17 24 24 C 1.38288 * 120.10725 * 359.77155 * 23 19 18 25 25 C 1.38130 * 120.05818 * 0.02562 * 24 23 19 26 26 C 1.53786 * 87.17342 * 334.61009 * 8 7 5 27 27 H 1.09000 * 109.47118 * 299.99834 * 1 2 3 28 28 H 1.08997 * 109.47087 * 60.00114 * 1 2 3 29 29 H 1.09001 * 109.47188 * 180.02562 * 1 2 3 30 30 H 1.09007 * 113.61072 * 25.51624 * 7 5 3 31 31 H 1.08999 * 113.61623 * 254.61694 * 7 5 3 32 32 H 1.08993 * 109.46935 * 265.69532 * 11 10 8 33 33 H 1.09003 * 109.46883 * 25.69513 * 11 10 8 34 34 H 1.09001 * 109.47407 * 145.69345 * 11 10 8 35 35 H 1.08999 * 109.47197 * 299.99847 * 14 12 10 36 36 H 1.08997 * 109.46932 * 60.00364 * 14 12 10 37 37 H 1.08999 * 109.47547 * 299.99541 * 15 14 12 38 38 H 1.08997 * 109.47146 * 60.00451 * 15 14 12 39 39 H 1.08006 * 120.02226 * 359.97438 * 18 17 16 40 40 H 1.08996 * 109.47126 * 305.25378 * 20 19 18 41 41 H 0.96700 * 114.00135 * 60.00086 * 21 20 19 42 42 H 1.48508 * 109.99845 * 180.02562 * 22 20 19 43 43 H 1.48506 * 110.00126 * 301.31681 * 22 20 19 44 44 H 1.07997 * 119.94545 * 179.74994 * 23 19 18 45 45 H 1.08000 * 119.97532 * 179.97438 * 24 23 19 46 46 H 1.07995 * 120.02570 * 179.97438 * 25 24 23 47 47 H 1.08999 * 113.61191 * 139.93984 * 26 8 7 48 48 H 1.08999 * 113.61091 * 270.84107 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1959 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0239 0.6362 -0.7550 7 6 4.1077 2.7142 0.0011 8 6 5.1820 2.2261 0.9873 9 1 6.0819 1.8491 0.5012 10 7 5.4721 3.1815 2.0592 11 6 4.3841 3.7021 2.8908 12 6 6.7400 3.5816 2.2805 13 8 7.6407 3.1510 1.5918 14 6 7.0385 4.5640 3.3836 15 6 8.5414 4.8484 3.4203 16 8 8.8244 5.7804 4.4659 17 6 10.1234 6.1420 4.6353 18 6 10.4689 7.0471 5.6280 19 6 11.7908 7.4095 5.8012 20 6 12.1675 8.3889 6.8829 21 8 11.8957 7.8133 8.1623 22 14 13.9827 8.7880 6.7545 23 6 12.7678 6.8783 4.9798 24 6 12.4253 5.9797 3.9860 25 6 11.1056 5.6110 3.8115 26 6 4.1945 1.1209 1.3976 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 3.4176 3.4401 0.4313 31 1 4.5098 3.0298 -0.9616 32 1 4.0347 4.6495 2.4806 33 1 3.5621 2.9863 2.9035 34 1 4.7460 3.8577 3.9072 35 1 6.4978 5.4923 3.1996 36 1 6.7244 4.1438 4.3391 37 1 9.0825 3.9203 3.6041 38 1 8.8550 5.2688 2.4648 39 1 9.7055 7.4658 6.2671 40 1 11.5853 9.3026 6.7645 41 1 12.3808 6.9951 8.3366 42 1 14.3670 9.7526 7.8162 43 1 14.7863 7.5457 6.8826 44 1 13.8000 7.1659 5.1142 45 1 13.1901 5.5664 3.3453 46 1 10.8386 4.9095 3.0350 47 1 4.6667 0.1521 1.5608 48 1 3.5283 1.4104 2.2103 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12109654_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:44:51 Heat of formation + Delta-G solvation = -124.168531 kcal Electronic energy + Delta-G solvation = -29824.900825 eV Core-core repulsion = 25427.513707 eV Total energy + Delta-G solvation = -4397.387118 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.15098 -41.36284 -40.95837 -39.47080 -38.97024 -37.41006 -37.30801 -35.73183 -33.27306 -32.44023 -30.83471 -29.56227 -28.31934 -27.36853 -27.00418 -26.76447 -25.20577 -23.64521 -22.66928 -21.87335 -20.72777 -20.23243 -19.35589 -18.92587 -18.24908 -18.01212 -17.66462 -17.60976 -17.45080 -17.11428 -16.85060 -16.57402 -16.43752 -16.19656 -16.09235 -15.47738 -14.91385 -14.79282 -14.76118 -14.40593 -14.35581 -14.29217 -14.05207 -13.97573 -13.74406 -13.57557 -13.29395 -13.14841 -13.07052 -12.92960 -12.83219 -12.58091 -12.34381 -12.28403 -11.90423 -11.88338 -11.83936 -11.80528 -11.51757 -11.40782 -10.97258 -10.60809 -9.89764 -9.84521 -9.20629 -4.93268 0.25509 0.45272 1.08336 1.28418 1.41566 1.46118 1.62097 1.74745 1.97472 2.29310 2.71176 3.07352 3.18718 3.38917 3.41038 3.49162 3.60534 3.63431 3.73422 3.78257 3.87010 3.90020 3.94299 4.08550 4.11281 4.18724 4.20206 4.24970 4.29515 4.33975 4.35681 4.40051 4.43900 4.53777 4.55220 4.57392 4.58345 4.61540 4.68286 4.73698 4.75706 4.99775 5.01379 5.29334 5.30795 5.34959 5.42144 5.48514 5.72459 6.13408 6.40197 6.41917 6.67217 6.95263 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.504 6.504 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.131 4.131 8 C 0.123 3.877 9 H 0.131 0.869 10 N -0.604 5.604 11 C 0.068 3.932 12 C 0.524 3.476 13 O -0.537 6.537 14 C -0.140 4.140 15 C 0.074 3.926 16 O -0.316 6.316 17 C 0.132 3.868 18 C -0.125 4.125 19 C -0.080 4.080 20 C -0.076 4.076 21 O -0.528 6.528 22 Si 0.691 3.309 23 C -0.156 4.156 24 C -0.073 4.073 25 C -0.202 4.202 26 C -0.134 4.134 27 H 0.064 0.936 28 H 0.064 0.936 29 H 0.104 0.896 30 H 0.103 0.897 31 H 0.087 0.913 32 H 0.064 0.936 33 H 0.078 0.922 34 H 0.077 0.923 35 H 0.108 0.892 36 H 0.108 0.892 37 H 0.072 0.928 38 H 0.073 0.927 39 H 0.133 0.867 40 H 0.120 0.880 41 H 0.376 0.624 42 H -0.257 1.257 43 H -0.260 1.260 44 H 0.129 0.871 45 H 0.130 0.870 46 H 0.132 0.868 47 H 0.092 0.908 48 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.593 -1.746 -1.320 2.707 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.391 6.391 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.170 4.170 8 C 0.019 3.981 9 H 0.149 0.851 10 N -0.336 5.336 11 C -0.075 4.075 12 C 0.312 3.688 13 O -0.413 6.413 14 C -0.180 4.180 15 C -0.001 4.001 16 O -0.230 6.230 17 C 0.087 3.913 18 C -0.144 4.144 19 C -0.081 4.081 20 C -0.186 4.186 21 O -0.335 6.335 22 Si 0.592 3.408 23 C -0.174 4.174 24 C -0.091 4.091 25 C -0.220 4.220 26 C -0.172 4.172 27 H 0.082 0.918 28 H 0.083 0.917 29 H 0.122 0.878 30 H 0.121 0.879 31 H 0.105 0.895 32 H 0.083 0.917 33 H 0.097 0.903 34 H 0.096 0.904 35 H 0.126 0.874 36 H 0.126 0.874 37 H 0.091 0.909 38 H 0.091 0.909 39 H 0.151 0.849 40 H 0.137 0.863 41 H 0.224 0.776 42 H -0.182 1.182 43 H -0.185 1.185 44 H 0.146 0.854 45 H 0.148 0.852 46 H 0.150 0.850 47 H 0.111 0.889 48 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -1.139 -1.116 -1.123 1.950 hybrid contribution -0.749 -1.128 0.447 1.426 sum -1.888 -2.244 -0.676 3.009 Atomic orbital electron populations 1.23331 0.75868 1.04066 1.02726 1.86520 1.23774 1.33261 1.83757 1.23467 0.91541 0.81449 0.72132 1.90688 1.66948 1.36430 1.45010 1.22336 0.87723 1.01231 1.01522 0.85041 1.23466 0.97543 0.94750 1.01205 1.22576 0.98234 0.89090 0.88159 0.85146 1.47724 1.07095 1.44724 1.34060 1.21943 0.90528 1.00037 0.94988 1.20325 0.82173 0.81635 0.84622 1.90740 1.44632 1.56882 1.49082 1.21512 0.96772 1.00410 0.99294 1.22430 0.95070 0.92532 0.90103 1.85975 1.23498 1.60395 1.53133 1.18959 0.82778 0.94622 0.94925 1.20247 0.96301 0.99283 0.98546 1.20057 0.92962 0.97990 0.97080 1.25076 1.13624 0.97554 0.82314 1.86609 1.69575 1.44015 1.33273 0.94840 0.73814 0.82730 0.89429 1.20977 0.98896 0.99879 0.97668 1.20930 0.95609 0.95813 0.96773 1.21402 0.93665 1.04599 1.02369 1.23470 0.97980 1.00772 0.95002 0.91761 0.91688 0.87800 0.87895 0.89469 0.91698 0.90300 0.90388 0.87370 0.87423 0.90946 0.90860 0.84866 0.86254 0.77615 1.18245 1.18525 0.85407 0.85179 0.84971 0.88935 0.88696 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.27 10.56 -39.25 -0.41 -0.68 16 3 C 0.47 0.47 7.49 36.01 0.27 0.74 16 4 O -0.50 -1.87 15.65 -18.75 -0.29 -2.17 16 5 C -0.11 0.19 4.26 -90.87 -0.39 -0.20 16 6 H 0.13 -0.44 8.14 -51.93 -0.42 -0.86 16 7 C -0.13 0.18 7.00 -25.92 -0.18 0.00 16 8 C 0.12 -0.17 4.23 -67.12 -0.28 -0.45 16 9 H 0.13 -0.06 7.17 -51.93 -0.37 -0.43 16 10 N -0.60 0.74 3.09 -173.00 -0.53 0.21 16 11 C 0.07 -0.24 9.17 59.85 0.55 0.31 16 12 C 0.52 0.25 7.67 -10.99 -0.08 0.16 16 13 O -0.54 -2.09 15.44 5.55 0.09 -2.01 16 14 C -0.14 0.21 4.68 -27.88 -0.13 0.08 16 15 C 0.07 0.02 4.03 37.16 0.15 0.17 16 16 O -0.32 -0.60 10.14 -19.42 -0.20 -0.80 16 17 C 0.13 0.29 6.69 -39.22 -0.26 0.03 16 18 C -0.13 -0.25 9.63 -39.44 -0.38 -0.63 16 19 C -0.08 -0.08 5.35 -104.64 -0.56 -0.64 16 20 C -0.08 -0.02 2.80 36.01 0.10 0.08 16 21 O -0.53 -0.91 12.84 -35.23 -0.45 -1.36 16 22 Si 0.69 -0.47 29.88 -169.99 -5.08 -5.55 16 23 C -0.16 -0.05 8.67 -39.56 -0.34 -0.39 16 24 C -0.07 -0.03 10.04 -39.60 -0.40 -0.43 16 25 C -0.20 -0.26 9.04 -39.43 -0.36 -0.61 16 26 C -0.13 0.33 7.14 -25.83 -0.18 0.15 16 27 H 0.06 -0.08 8.13 -51.93 -0.42 -0.50 16 28 H 0.06 -0.06 8.13 -51.93 -0.42 -0.49 16 29 H 0.10 -0.35 8.14 -51.93 -0.42 -0.78 16 30 H 0.10 -0.04 6.76 -51.92 -0.35 -0.39 16 31 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.06 -0.25 8.14 -51.93 -0.42 -0.67 16 33 H 0.08 -0.30 5.79 -51.93 -0.30 -0.60 16 34 H 0.08 -0.38 6.62 -51.93 -0.34 -0.72 16 35 H 0.11 -0.29 8.11 -51.93 -0.42 -0.71 16 36 H 0.11 -0.31 7.41 -51.93 -0.38 -0.70 16 37 H 0.07 0.05 7.62 -51.93 -0.40 -0.35 16 38 H 0.07 0.04 7.62 -51.93 -0.40 -0.35 16 39 H 0.13 0.25 8.06 -52.48 -0.42 -0.17 16 40 H 0.12 -0.06 7.96 -51.93 -0.41 -0.47 16 41 H 0.38 -0.41 8.70 45.56 0.40 -0.01 16 42 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 43 H -0.26 -0.31 7.01 56.52 0.40 0.09 16 44 H 0.13 -0.17 4.83 -52.49 -0.25 -0.43 16 45 H 0.13 -0.21 8.06 -52.49 -0.42 -0.64 16 46 H 0.13 0.04 6.30 -52.49 -0.33 -0.29 16 47 H 0.09 -0.28 8.14 -51.93 -0.42 -0.71 16 48 H 0.09 -0.25 5.94 -51.93 -0.31 -0.55 16 LS Contribution 394.06 15.07 5.94 5.94 Total: 0.00 -9.32 394.06 -9.24 -18.56 By element: Atomic # 1 Polarization: -4.66 SS G_CDS: -6.88 Total: -11.54 kcal Atomic # 6 Polarization: 0.81 SS G_CDS: -1.41 Total: -0.61 kcal Atomic # 7 Polarization: 0.74 SS G_CDS: -0.53 Total: 0.21 kcal Atomic # 8 Polarization: -5.75 SS G_CDS: -1.27 Total: -7.02 kcal Atomic # 14 Polarization: -0.47 SS G_CDS: -5.08 Total: -5.55 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -9.32 -9.24 -18.56 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12109654_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.605 kcal (2) G-P(sol) polarization free energy of solvation -9.321 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.926 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.242 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.563 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.169 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds