Wall clock time and date at job start Tue Mar 9 2021 14:44:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34228 * 116.99799 * 2 1 4 4 O 1.20828 * 120.00164 * 359.97438 * 3 2 1 5 5 C 1.50701 * 119.99974 * 180.02562 * 3 2 1 6 6 H 1.09005 * 112.90569 * 48.74560 * 5 3 2 7 7 C 1.53782 * 113.61291 * 179.97438 * 5 3 2 8 8 C 1.53785 * 87.07789 * 139.98079 * 7 5 3 9 9 H 1.08999 * 113.61257 * 89.19930 * 8 7 5 10 10 N 1.46501 * 113.61456 * 220.01570 * 8 7 5 11 11 C 1.46502 * 119.99813 * 53.87603 * 10 8 7 12 12 C 1.34768 * 120.00182 * 233.87359 * 10 8 7 13 13 O 1.21286 * 120.00188 * 0.02562 * 12 10 8 14 14 C 1.50706 * 119.99921 * 179.97438 * 12 10 8 15 15 C 1.53007 * 109.46761 * 179.97438 * 14 12 10 16 16 C 1.53001 * 109.46631 * 179.97438 * 15 14 12 17 17 O 1.42900 * 109.47033 * 180.02562 * 16 15 14 18 18 C 1.35903 * 117.00080 * 180.02562 * 17 16 15 19 19 C 1.38710 * 120.05465 * 180.25139 * 18 17 16 20 20 C 1.38162 * 119.94241 * 180.20977 * 19 18 17 21 21 C 1.50704 * 119.97308 * 179.79227 * 20 19 18 22 22 O 1.42897 * 109.47008 * 299.72317 * 21 20 19 23 23 Si 1.86297 * 109.46999 * 179.72420 * 21 20 19 24 24 C 1.38247 * 120.05533 * 359.51487 * 20 19 18 25 25 C 1.38289 * 120.11264 * 0.27749 * 24 20 19 26 26 C 1.38125 * 120.05282 * 359.95462 * 25 24 20 27 27 C 1.53776 * 87.08242 * 334.56869 * 8 7 5 28 28 H 1.09001 * 109.47096 * 179.97438 * 1 2 3 29 29 H 1.08998 * 109.47059 * 299.99957 * 1 2 3 30 30 H 1.08995 * 109.47324 * 60.00176 * 1 2 3 31 31 H 1.08996 * 113.61474 * 25.43664 * 7 5 3 32 32 H 1.08998 * 113.61493 * 254.53025 * 7 5 3 33 33 H 1.09007 * 109.46762 * 265.82391 * 11 10 8 34 34 H 1.09000 * 109.47301 * 25.81763 * 11 10 8 35 35 H 1.08994 * 109.47604 * 145.82423 * 11 10 8 36 36 H 1.09004 * 109.46821 * 60.00210 * 14 12 10 37 37 H 1.08999 * 109.47313 * 300.00390 * 14 12 10 38 38 H 1.09000 * 109.46637 * 60.00533 * 15 14 12 39 39 H 1.08997 * 109.47190 * 300.00338 * 15 14 12 40 40 H 1.09004 * 109.46798 * 60.00528 * 16 15 14 41 41 H 1.08999 * 109.47466 * 300.00628 * 16 15 14 42 42 H 1.08004 * 120.02955 * 359.97438 * 19 18 17 43 43 H 1.08999 * 109.46661 * 59.72578 * 21 20 19 44 44 H 0.96692 * 114.00181 * 300.00113 * 22 21 20 45 45 H 1.48500 * 109.99804 * 180.02562 * 23 21 20 46 46 H 1.48501 * 110.00319 * 301.31620 * 23 21 20 47 47 H 1.08002 * 119.94512 * 180.25169 * 24 20 19 48 48 H 1.07995 * 119.97430 * 179.97438 * 25 24 20 49 49 H 1.07997 * 120.02466 * 180.02562 * 26 25 24 50 50 H 1.08999 * 113.61991 * 139.98343 * 27 8 7 51 51 H 1.09010 * 113.61390 * 270.88433 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0244 0.6361 -0.7558 7 6 4.1077 2.7143 -0.0011 8 6 5.1814 2.2271 0.9862 9 1 6.0815 1.8497 0.5011 10 7 5.4709 3.1836 2.0574 11 6 4.3823 3.7048 2.8879 12 6 6.7385 3.5840 2.2790 13 8 7.6396 3.1528 1.5912 14 6 7.0361 4.5684 3.3806 15 6 8.5392 4.8518 3.4188 16 6 8.8413 5.8517 4.5368 17 8 10.2450 6.1170 4.5722 18 6 10.6842 6.9910 5.5157 19 6 12.0340 7.2984 5.6032 20 6 12.4785 8.1839 6.5661 21 6 13.9455 8.5148 6.6648 22 8 14.6860 7.3220 6.9311 23 14 14.2152 9.7347 8.0468 24 6 11.5781 8.7710 7.4354 25 6 10.2313 8.4695 7.3474 26 6 9.7825 7.5812 6.3896 27 6 4.1917 1.1239 1.3962 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8899 31 1 3.4174 3.4406 0.4279 32 1 4.5104 3.0290 -0.9639 33 1 4.0314 4.6508 2.4752 34 1 3.5613 2.9881 2.9026 35 1 4.7442 3.8636 3.9037 36 1 6.7212 4.1499 4.3366 37 1 6.4956 5.4964 3.1945 38 1 8.8544 5.2701 2.4629 39 1 9.0794 3.9236 3.6051 40 1 8.5260 5.4338 5.4929 41 1 8.3011 6.7798 4.3500 42 1 12.7374 6.8430 4.9217 43 1 14.2837 8.9503 5.7246 44 1 14.4371 6.8801 7.7543 45 1 15.6579 10.0696 8.1542 46 1 13.4253 10.9673 7.7977 47 1 11.9270 9.4661 8.1847 48 1 9.5299 8.9291 8.0278 49 1 8.7306 7.3463 6.3210 50 1 4.6620 0.1546 1.5615 51 1 3.5242 1.4154 2.2072 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12109654_4549616.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:44:54 Heat of formation + Delta-G solvation = -130.786723 kcal Electronic energy + Delta-G solvation = -31375.699081 eV Core-core repulsion = 26822.487358 eV Total energy + Delta-G solvation = -4553.211723 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.12281 -41.28625 -41.00342 -39.41600 -39.06378 -37.39897 -37.26195 -35.68323 -34.86812 -32.43735 -31.25918 -29.71264 -28.58878 -28.27828 -27.04337 -26.89961 -26.42846 -23.87265 -23.58936 -22.34988 -21.82865 -20.69926 -20.20208 -19.13749 -18.94649 -18.24375 -17.90164 -17.75981 -17.59976 -17.45244 -17.18888 -16.85956 -16.67808 -16.52503 -16.22486 -16.09913 -15.34819 -15.15562 -15.05727 -14.78337 -14.44162 -14.33340 -14.23180 -14.13506 -14.09852 -13.76025 -13.69032 -13.35943 -13.30366 -13.24772 -13.03491 -13.02153 -12.72550 -12.51284 -12.40522 -12.26692 -12.23304 -11.89875 -11.87068 -11.83480 -11.67272 -11.58561 -11.39123 -10.85158 -10.47687 -9.88977 -9.78468 -9.20950 -5.02082 0.23417 0.43766 1.09445 1.29234 1.51026 1.54862 1.64789 1.83751 1.97744 2.23057 2.70418 3.09194 3.20955 3.37588 3.48187 3.52119 3.61959 3.65600 3.74759 3.79183 3.85279 3.87404 3.94704 4.01739 4.06948 4.11294 4.11832 4.18946 4.21229 4.23896 4.28155 4.36916 4.37778 4.41634 4.45135 4.46588 4.54543 4.56363 4.58344 4.64788 4.69962 4.77971 4.94558 4.99703 5.02826 5.14460 5.29831 5.32093 5.38728 5.39561 5.46345 5.71860 6.21953 6.43202 6.59059 6.67981 7.06914 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.504 6.504 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.132 4.132 8 C 0.123 3.877 9 H 0.130 0.870 10 N -0.607 5.607 11 C 0.070 3.930 12 C 0.518 3.482 13 O -0.532 6.532 14 C -0.136 4.136 15 C -0.106 4.106 16 C 0.060 3.940 17 O -0.311 6.311 18 C 0.133 3.867 19 C -0.126 4.126 20 C -0.081 4.081 21 C -0.070 4.070 22 O -0.538 6.538 23 Si 0.694 3.306 24 C -0.157 4.157 25 C -0.073 4.073 26 C -0.206 4.206 27 C -0.134 4.134 28 H 0.104 0.896 29 H 0.064 0.936 30 H 0.064 0.936 31 H 0.102 0.898 32 H 0.086 0.914 33 H 0.062 0.938 34 H 0.077 0.923 35 H 0.076 0.924 36 H 0.099 0.901 37 H 0.098 0.902 38 H 0.083 0.917 39 H 0.084 0.916 40 H 0.064 0.936 41 H 0.064 0.936 42 H 0.134 0.866 43 H 0.115 0.885 44 H 0.379 0.621 45 H -0.255 1.255 46 H -0.258 1.258 47 H 0.128 0.872 48 H 0.130 0.870 49 H 0.129 0.871 50 H 0.091 0.909 51 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.600 -1.282 4.862 7.526 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.391 6.391 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.170 4.170 8 C 0.019 3.981 9 H 0.148 0.852 10 N -0.340 5.340 11 C -0.073 4.073 12 C 0.306 3.694 13 O -0.408 6.408 14 C -0.176 4.176 15 C -0.144 4.144 16 C -0.015 4.015 17 O -0.225 6.225 18 C 0.087 3.913 19 C -0.145 4.145 20 C -0.081 4.081 21 C -0.181 4.181 22 O -0.344 6.344 23 Si 0.595 3.405 24 C -0.175 4.175 25 C -0.091 4.091 26 C -0.224 4.224 27 C -0.172 4.172 28 H 0.122 0.878 29 H 0.082 0.918 30 H 0.083 0.917 31 H 0.120 0.880 32 H 0.105 0.895 33 H 0.081 0.919 34 H 0.096 0.904 35 H 0.094 0.906 36 H 0.117 0.883 37 H 0.117 0.883 38 H 0.102 0.898 39 H 0.103 0.897 40 H 0.083 0.917 41 H 0.082 0.918 42 H 0.152 0.848 43 H 0.133 0.867 44 H 0.227 0.773 45 H -0.180 1.180 46 H -0.183 1.183 47 H 0.145 0.855 48 H 0.148 0.852 49 H 0.147 0.853 50 H 0.110 0.890 51 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -4.672 -0.356 4.011 6.168 hybrid contribution -0.991 -0.026 -0.573 1.145 sum -5.662 -0.381 3.438 6.635 Atomic orbital electron populations 1.23329 0.75895 1.04056 1.02708 1.86525 1.23752 1.33267 1.83759 1.23481 0.91558 0.81435 0.72094 1.90684 1.66960 1.36435 1.45055 1.22314 0.87678 1.01279 1.01547 0.85039 1.23471 0.97594 0.94703 1.01234 1.22550 0.98144 0.89120 0.88248 0.85202 1.47779 1.07247 1.44824 1.34157 1.21894 0.90579 0.99914 0.94902 1.20611 0.81898 0.81883 0.84983 1.90743 1.44595 1.56597 1.48883 1.21574 0.97841 0.99619 0.98585 1.21249 0.94177 0.99931 0.99018 1.22820 0.79798 0.99175 0.99734 1.86088 1.25564 1.59117 1.51708 1.19026 0.93318 0.90119 0.88827 1.20273 0.92789 1.00686 1.00733 1.20144 0.95948 0.96699 0.95312 1.25121 0.88507 0.95324 1.09142 1.86513 1.61785 1.39593 1.46484 0.94629 0.80722 0.78956 0.86146 1.20923 0.93626 1.02418 1.00511 1.20910 0.95419 0.95873 0.96946 1.21311 0.99685 1.02323 0.99110 1.23435 0.98020 1.00839 0.94942 0.87808 0.91769 0.91705 0.87970 0.89540 0.91924 0.90438 0.90581 0.88318 0.88324 0.89799 0.89748 0.91742 0.91806 0.84790 0.86737 0.77325 1.17981 1.18302 0.85459 0.85228 0.85271 0.88990 0.88753 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.30 10.57 -39.25 -0.41 -0.71 16 3 C 0.47 0.53 7.48 36.01 0.27 0.80 16 4 O -0.50 -1.91 15.65 -18.75 -0.29 -2.20 16 5 C -0.11 0.16 4.26 -90.96 -0.39 -0.23 16 6 H 0.13 -0.40 8.14 -51.93 -0.42 -0.82 16 7 C -0.13 0.15 6.99 -25.92 -0.18 -0.04 16 8 C 0.12 -0.13 4.24 -67.12 -0.28 -0.41 16 9 H 0.13 0.01 7.17 -51.93 -0.37 -0.36 16 10 N -0.61 0.68 3.09 -173.00 -0.53 0.14 16 11 C 0.07 -0.26 9.17 59.85 0.55 0.29 16 12 C 0.52 0.35 7.67 -10.99 -0.08 0.27 16 13 O -0.53 -2.55 15.44 5.55 0.09 -2.47 16 14 C -0.14 0.34 4.31 -27.88 -0.12 0.22 16 15 C -0.11 0.04 4.87 -26.73 -0.13 -0.09 16 16 C 0.06 -0.06 4.74 37.16 0.18 0.12 16 17 O -0.31 -0.75 10.14 -19.43 -0.20 -0.95 16 18 C 0.13 0.28 6.69 -39.22 -0.26 0.02 16 19 C -0.13 -0.30 9.56 -39.43 -0.38 -0.67 16 20 C -0.08 -0.08 5.39 -104.64 -0.56 -0.64 16 21 C -0.07 -0.03 2.82 36.01 0.10 0.07 16 22 O -0.54 -0.50 12.77 -35.23 -0.45 -0.95 16 23 Si 0.69 -0.55 29.79 -169.99 -5.06 -5.61 16 24 C -0.16 0.01 8.67 -39.56 -0.34 -0.33 16 25 C -0.07 0.03 10.04 -39.60 -0.40 -0.37 16 26 C -0.21 -0.06 9.04 -39.43 -0.36 -0.42 16 27 C -0.13 0.30 7.12 -25.92 -0.18 0.12 16 28 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 29 H 0.06 -0.08 8.13 -51.93 -0.42 -0.50 16 30 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 31 H 0.10 -0.02 6.75 -51.93 -0.35 -0.37 16 32 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 33 H 0.06 -0.25 8.14 -51.93 -0.42 -0.67 16 34 H 0.08 -0.30 5.78 -51.93 -0.30 -0.60 16 35 H 0.08 -0.42 6.61 -51.93 -0.34 -0.76 16 36 H 0.10 -0.45 7.41 -51.93 -0.38 -0.83 16 37 H 0.10 -0.42 8.11 -51.93 -0.42 -0.84 16 38 H 0.08 0.11 8.10 -51.93 -0.42 -0.31 16 39 H 0.08 0.09 8.10 -51.93 -0.42 -0.33 16 40 H 0.06 -0.16 7.66 -51.93 -0.40 -0.55 16 41 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 42 H 0.13 0.37 8.06 -52.48 -0.42 -0.06 16 43 H 0.12 0.10 7.96 -51.93 -0.41 -0.31 16 44 H 0.38 -1.15 8.70 45.56 0.40 -0.75 16 45 H -0.25 -0.62 7.11 56.52 0.40 -0.21 16 46 H -0.26 -0.37 7.11 56.52 0.40 0.03 16 47 H 0.13 -0.25 4.87 -52.49 -0.26 -0.50 16 48 H 0.13 -0.34 8.06 -52.49 -0.42 -0.77 16 49 H 0.13 -0.24 6.30 -52.49 -0.33 -0.57 16 50 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 51 H 0.09 -0.24 5.93 -51.92 -0.31 -0.54 16 LS Contribution 415.48 15.07 6.26 6.26 Total: 0.00 -10.56 415.48 -9.84 -20.40 By element: Atomic # 1 Polarization: -5.91 SS G_CDS: -7.72 Total: -13.63 kcal Atomic # 6 Polarization: 1.23 SS G_CDS: -1.51 Total: -0.28 kcal Atomic # 7 Polarization: 0.68 SS G_CDS: -0.53 Total: 0.14 kcal Atomic # 8 Polarization: -6.02 SS G_CDS: -1.27 Total: -7.28 kcal Atomic # 14 Polarization: -0.55 SS G_CDS: -5.06 Total: -5.61 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -10.56 -9.84 -20.40 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12109654_4549616.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.384 kcal (2) G-P(sol) polarization free energy of solvation -10.564 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.949 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.838 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.402 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.787 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds