Wall clock time and date at job start Tue Mar 9 2021 14:45:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34225 * 116.99766 * 2 1 4 4 O 1.20824 * 119.99978 * 359.97438 * 3 2 1 5 5 C 1.50699 * 119.99904 * 179.97438 * 3 2 1 6 6 H 1.08994 * 112.85044 * 48.80608 * 5 3 2 7 7 C 1.53781 * 113.61313 * 180.02562 * 5 3 2 8 8 C 1.53779 * 87.08113 * 140.06800 * 7 5 3 9 9 H 1.09002 * 113.62270 * 89.19652 * 8 7 5 10 10 N 1.46502 * 113.61587 * 220.02264 * 8 7 5 11 11 C 1.46494 * 120.00270 * 53.86464 * 10 8 7 12 12 C 1.34783 * 119.99556 * 233.87432 * 10 8 7 13 13 O 1.21272 * 120.00080 * 359.97438 * 12 10 8 14 14 C 1.50701 * 119.99642 * 179.97438 * 12 10 8 15 15 O 1.42904 * 109.47193 * 179.97438 * 14 12 10 16 16 C 1.35895 * 116.99918 * 179.97438 * 15 14 12 17 17 C 1.38716 * 120.05121 * 179.72637 * 16 15 14 18 18 N 1.47999 * 120.02856 * 0.02562 * 17 16 15 19 19 O 1.21805 * 119.99711 * 179.97438 * 18 17 16 20 20 O 1.21801 * 120.00223 * 0.02562 * 18 17 16 21 21 C 1.38166 * 119.94274 * 179.74741 * 17 16 15 22 22 C 1.38256 * 120.05230 * 0.52650 * 21 17 16 23 23 C 1.50697 * 119.94084 * 179.72349 * 22 21 17 24 24 O 1.42901 * 109.47329 * 300.02321 * 23 22 21 25 25 Si 1.86298 * 109.47029 * 180.02562 * 23 22 21 26 26 C 1.38281 * 120.11208 * 359.74439 * 22 21 17 27 27 C 1.38125 * 120.05568 * 359.97438 * 26 22 21 28 28 C 1.53783 * 87.08248 * 334.56544 * 8 7 5 29 29 H 1.09004 * 109.47345 * 179.97438 * 1 2 3 30 30 H 1.08996 * 109.47496 * 299.99644 * 1 2 3 31 31 H 1.09004 * 109.47267 * 60.00288 * 1 2 3 32 32 H 1.08992 * 113.62002 * 25.52005 * 7 5 3 33 33 H 1.09006 * 113.61585 * 254.61250 * 7 5 3 34 34 H 1.08994 * 109.47504 * 265.83323 * 11 10 8 35 35 H 1.08998 * 109.46861 * 25.83673 * 11 10 8 36 36 H 1.09008 * 109.46916 * 145.82759 * 11 10 8 37 37 H 1.09002 * 109.46876 * 299.99685 * 14 12 10 38 38 H 1.09001 * 109.47294 * 59.99469 * 14 12 10 39 39 H 1.07992 * 119.97509 * 180.27297 * 21 17 16 40 40 H 1.09001 * 109.47210 * 60.02498 * 23 22 21 41 41 H 0.96704 * 113.99717 * 299.99673 * 24 23 22 42 42 H 1.48506 * 110.00275 * 58.67934 * 25 23 22 43 43 H 1.48499 * 110.00044 * 180.02562 * 25 23 22 44 44 H 1.08002 * 119.97400 * 179.97438 * 26 22 21 45 45 H 1.08000 * 120.02554 * 179.97438 * 27 26 22 46 46 H 1.08997 * 113.61430 * 139.97754 * 28 8 7 47 47 H 1.08997 * 113.61350 * 270.88981 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0239 0.6363 -0.7549 7 6 4.1076 2.7143 0.0011 8 6 5.1820 2.2261 0.9872 9 1 6.0819 1.8491 0.5013 10 7 5.4721 3.1815 2.0593 11 6 4.3841 3.7020 2.8909 12 6 6.7400 3.5817 2.2804 13 8 7.6406 3.1507 1.5921 14 6 7.0383 4.5649 3.3828 15 8 8.4422 4.8298 3.4178 16 6 8.8819 5.7031 4.3617 17 6 10.2332 6.0018 4.4559 18 7 11.1979 5.3700 3.5282 19 8 12.3843 5.6330 3.6112 20 8 10.8053 4.5878 2.6811 21 6 10.6772 6.8940 5.4130 22 6 9.7771 7.4805 6.2832 23 6 10.2649 8.4485 7.3301 24 8 11.1987 7.7908 8.1889 25 14 8.8190 9.0569 8.3351 26 6 8.4302 7.1801 6.1949 27 6 7.9807 6.2932 5.2361 28 6 4.1925 1.1225 1.3969 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3634 0.5137 0.8900 31 1 -0.3634 0.5138 -0.8900 32 1 3.4177 3.4401 0.4313 33 1 4.5098 3.0299 -0.9616 34 1 4.0329 4.6482 2.4794 35 1 3.5632 2.9851 2.9056 36 1 4.7468 3.8597 3.9067 37 1 6.4976 5.4931 3.1980 38 1 6.7241 4.1456 4.3386 39 1 11.7285 7.1302 5.4839 40 1 10.7513 9.2944 6.8444 41 1 10.8334 7.0265 8.6552 42 1 8.1279 7.9098 8.9770 43 1 9.2866 10.0129 9.3708 44 1 7.7292 7.6393 6.8761 45 1 6.9287 6.0586 5.1678 46 1 4.6631 0.1531 1.5608 47 1 3.5256 1.4132 2.2085 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12109654_4549638.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:45:15 Heat of formation + Delta-G solvation = -109.724636 kcal Electronic energy + Delta-G solvation = -34937.764405 eV Core-core repulsion = 29865.524805 eV Total energy + Delta-G solvation = -5072.239600 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.144 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -43.28882 -42.16379 -41.71971 -40.94215 -39.75795 -38.96159 -37.61625 -37.50193 -37.41831 -35.71503 -33.47616 -32.26365 -30.37478 -29.22369 -28.11177 -27.81681 -26.95370 -26.76533 -26.31400 -24.16005 -22.97549 -22.53325 -20.89514 -20.55319 -20.18348 -19.77419 -19.21280 -18.87243 -18.63607 -18.33026 -18.14397 -17.97016 -17.69953 -17.46159 -17.22588 -16.54669 -16.37797 -16.19471 -16.07160 -16.03949 -15.58411 -15.12857 -14.76793 -14.51714 -14.33124 -14.25387 -14.03732 -13.86584 -13.68683 -13.60115 -13.36057 -13.19824 -13.08032 -12.92062 -12.69874 -12.51037 -12.38384 -12.37601 -12.26927 -12.22279 -12.18284 -11.84460 -11.81148 -11.75758 -11.41515 -10.95670 -10.83450 -10.75031 -9.80441 -9.75994 -4.91180 -1.30738 -0.24036 0.16349 0.36033 1.04437 1.15149 1.26880 1.38923 1.61083 1.70930 2.02546 2.05360 2.19727 3.08993 3.14101 3.21617 3.31421 3.34465 3.44016 3.49596 3.62228 3.72021 3.73757 3.76679 3.84015 3.95742 4.00523 4.19126 4.27013 4.29134 4.29812 4.39651 4.48838 4.53318 4.56111 4.56198 4.64192 4.65631 4.70101 4.78662 4.84449 4.89471 4.96254 5.07891 5.11761 5.19048 5.32852 5.43646 5.76147 6.20797 6.42559 6.45317 6.64764 6.99343 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.474 3.526 4 O -0.534 6.534 5 C -0.107 4.107 6 H 0.146 0.854 7 C -0.127 4.127 8 C 0.120 3.880 9 H 0.112 0.888 10 N -0.596 5.596 11 C 0.054 3.946 12 C 0.509 3.491 13 O -0.562 6.562 14 C 0.026 3.974 15 O -0.291 6.291 16 C 0.194 3.806 17 C -0.104 4.104 18 N 0.034 4.966 19 O -0.204 6.204 20 O -0.173 6.173 21 C -0.003 4.003 22 C -0.147 4.147 23 C -0.091 4.091 24 O -0.551 6.551 25 Si 0.789 3.211 26 C -0.004 4.004 27 C -0.189 4.189 28 C -0.121 4.121 29 H 0.126 0.874 30 H 0.065 0.935 31 H 0.059 0.941 32 H 0.100 0.900 33 H 0.083 0.917 34 H 0.078 0.922 35 H 0.085 0.915 36 H 0.106 0.894 37 H 0.143 0.857 38 H 0.143 0.857 39 H 0.150 0.850 40 H 0.127 0.873 41 H 0.389 0.611 42 H -0.260 1.260 43 H -0.310 1.310 44 H 0.189 0.811 45 H 0.206 0.794 46 H 0.099 0.901 47 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.412 2.335 6.713 15.179 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.318 3.682 4 O -0.423 6.423 5 C -0.126 4.126 6 H 0.163 0.837 7 C -0.165 4.165 8 C 0.016 3.984 9 H 0.130 0.870 10 N -0.329 5.329 11 C -0.087 4.087 12 C 0.296 3.704 13 O -0.440 6.440 14 C -0.050 4.050 15 O -0.202 6.202 16 C 0.144 3.856 17 C -0.189 4.189 18 N 0.544 4.456 19 O -0.411 6.411 20 O -0.387 6.387 21 C -0.022 4.022 22 C -0.149 4.149 23 C -0.198 4.198 24 O -0.359 6.359 25 Si 0.692 3.308 26 C -0.021 4.021 27 C -0.207 4.207 28 C -0.159 4.159 29 H 0.145 0.855 30 H 0.083 0.917 31 H 0.078 0.922 32 H 0.119 0.881 33 H 0.102 0.898 34 H 0.096 0.904 35 H 0.103 0.897 36 H 0.124 0.876 37 H 0.161 0.839 38 H 0.160 0.840 39 H 0.168 0.832 40 H 0.145 0.855 41 H 0.239 0.761 42 H -0.186 1.186 43 H -0.238 1.238 44 H 0.206 0.794 45 H 0.222 0.778 46 H 0.118 0.882 47 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -13.447 3.065 7.174 15.546 hybrid contribution 1.135 -1.242 -0.349 1.718 sum -12.312 1.822 6.825 14.195 Atomic orbital electron populations 1.23532 0.74960 1.05580 1.02542 1.86527 1.24815 1.33182 1.83459 1.23868 0.92259 0.81037 0.71050 1.90665 1.67761 1.37289 1.46630 1.22394 0.86242 1.01361 1.02649 0.83667 1.23418 0.97162 0.94912 1.01036 1.22511 0.97754 0.89708 0.88407 0.86974 1.47725 1.06524 1.44415 1.34273 1.22310 0.89952 1.00824 0.95645 1.20521 0.82687 0.82199 0.84949 1.90830 1.46196 1.57198 1.49741 1.23181 0.79644 1.01544 1.00654 1.86470 1.26641 1.57189 1.49854 1.18976 0.90148 0.88117 0.88379 1.20859 0.86976 1.09606 1.01503 1.43904 1.01734 0.99251 1.00709 1.94505 1.01038 1.67587 1.77965 1.94678 1.83493 1.30478 1.30020 1.20844 1.02675 0.89704 0.89001 1.20378 0.93680 1.01728 0.99094 1.25517 1.04183 0.96355 0.93724 1.86635 1.39706 1.48507 1.61083 0.94172 0.77103 0.79206 0.80368 1.21717 0.94462 0.91205 0.94721 1.21798 1.01678 1.00830 0.96409 1.23398 0.97209 1.00627 0.94656 0.85536 0.91658 0.92170 0.88112 0.89807 0.90365 0.89690 0.87601 0.83944 0.83965 0.83213 0.85519 0.76149 1.18574 1.23817 0.79403 0.77753 0.88213 0.87693 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.09 10.56 113.37 1.20 1.10 16 2 O -0.36 -0.18 10.57 -51.37 -0.54 -0.72 16 3 C 0.47 0.47 7.49 71.24 0.53 1.01 16 4 O -0.53 -3.42 15.65 21.97 0.34 -3.08 16 5 C -0.11 0.45 4.26 -11.01 -0.05 0.40 16 6 H 0.15 -1.00 8.14 -2.39 -0.02 -1.02 16 7 C -0.13 0.43 6.99 31.12 0.22 0.64 16 8 C 0.12 -0.36 4.24 45.52 0.19 -0.17 16 9 H 0.11 0.17 7.17 -2.39 -0.02 0.15 16 10 N -0.60 2.86 3.09 -819.65 -2.53 0.33 16 11 C 0.05 -0.72 9.17 127.77 1.17 0.45 16 12 C 0.51 0.72 7.75 87.66 0.68 1.40 16 13 O -0.56 -8.02 15.95 16.03 0.26 -7.77 16 14 C 0.03 -0.19 3.83 71.24 0.27 0.09 16 15 O -0.29 -1.22 7.68 -63.34 -0.49 -1.71 16 16 C 0.19 0.02 6.67 22.51 0.15 0.17 16 17 C -0.10 -0.69 6.87 36.48 0.25 -0.44 16 18 N 0.03 0.56 4.45 -46.24 -0.21 0.36 16 19 O -0.20 -3.78 18.45 18.88 0.35 -3.43 16 20 O -0.17 -3.69 17.24 25.61 0.44 -3.25 16 21 C 0.00 0.00 9.11 22.26 0.20 0.20 16 22 C -0.15 0.92 5.39 -19.85 -0.11 0.81 16 23 C -0.09 0.61 2.82 71.23 0.20 0.81 16 24 O -0.55 0.93 12.77 -148.98 -1.90 -0.97 16 25 Si 0.79 -8.23 29.78 68.60 2.04 -6.19 16 26 C 0.00 0.05 8.66 22.25 0.19 0.24 16 27 C -0.19 2.15 9.04 22.36 0.20 2.36 16 28 C -0.12 0.78 7.13 31.12 0.22 1.00 16 29 H 0.13 -1.07 8.14 -2.38 -0.02 -1.09 16 30 H 0.06 -0.24 8.13 -2.39 -0.02 -0.26 16 31 H 0.06 -0.14 8.13 -2.38 -0.02 -0.16 16 32 H 0.10 -0.27 6.76 -2.39 -0.02 -0.29 16 33 H 0.08 -0.21 8.14 -2.38 -0.02 -0.23 16 34 H 0.08 -1.17 8.14 -2.39 -0.02 -1.19 16 35 H 0.08 -1.13 5.78 -2.39 -0.01 -1.14 16 36 H 0.11 -2.11 6.61 -2.38 -0.02 -2.12 16 37 H 0.14 -2.20 7.63 -2.39 -0.02 -2.22 16 38 H 0.14 -2.26 6.93 -2.39 -0.02 -2.28 16 39 H 0.15 0.53 7.61 -2.91 -0.02 0.50 16 40 H 0.13 -0.91 7.96 -2.39 -0.02 -0.93 16 41 H 0.39 -3.13 8.70 -74.05 -0.64 -3.78 16 42 H -0.26 2.44 7.11 99.48 0.71 3.15 16 43 H -0.31 0.07 7.11 99.48 0.71 0.78 16 44 H 0.19 -3.76 4.87 -2.91 -0.01 -3.77 16 45 H 0.21 -4.40 6.30 -2.91 -0.02 -4.42 16 46 H 0.10 -0.73 8.14 -2.39 -0.02 -0.75 16 47 H 0.10 -0.88 5.93 -2.39 -0.01 -0.90 16 Total: 0.00 -42.07 399.05 3.74 -38.33 By element: Atomic # 1 Polarization: -22.41 SS G_CDS: 0.45 Total: -21.96 kcal Atomic # 6 Polarization: 4.54 SS G_CDS: 5.53 Total: 10.07 kcal Atomic # 7 Polarization: 3.42 SS G_CDS: -2.74 Total: 0.69 kcal Atomic # 8 Polarization: -19.39 SS G_CDS: -1.54 Total: -20.93 kcal Atomic # 14 Polarization: -8.23 SS G_CDS: 2.04 Total: -6.19 kcal Total: -42.07 3.74 -38.33 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12109654_4549638.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.399 kcal (2) G-P(sol) polarization free energy of solvation -42.070 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.469 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.744 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.326 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.725 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds