Wall clock time and date at job start Tue Mar 9 2021 14:45:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34231 * 117.00155 * 2 1 4 4 O 1.20824 * 119.99873 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00143 * 180.02562 * 3 2 1 6 6 H 1.09002 * 112.84418 * 311.19449 * 5 3 2 7 7 C 1.53947 * 113.66854 * 82.44331 * 5 3 2 8 8 C 1.53783 * 87.02064 * 139.93346 * 7 5 3 9 9 H 1.08995 * 113.60955 * 89.23031 * 8 7 5 10 10 N 1.46495 * 113.61172 * 220.04952 * 8 7 5 11 11 C 1.46492 * 120.00347 * 39.13465 * 10 8 7 12 12 C 1.34776 * 119.99759 * 219.13683 * 10 8 7 13 13 O 1.21286 * 119.99797 * 0.02562 * 12 10 8 14 14 C 1.50697 * 120.00270 * 179.97438 * 12 10 8 15 15 O 1.42897 * 109.47593 * 179.97438 * 14 12 10 16 16 C 1.35902 * 117.00348 * 180.02562 * 15 14 12 17 17 C 1.38717 * 120.05576 * 180.25200 * 16 15 14 18 18 C 1.38165 * 119.94198 * 180.24842 * 17 16 15 19 19 C 1.50699 * 119.97216 * 179.74695 * 18 17 16 20 20 O 1.42901 * 109.46830 * 299.72675 * 19 18 17 21 21 Si 1.86298 * 109.46950 * 179.73112 * 19 18 17 22 22 C 1.38252 * 120.05599 * 359.47653 * 18 17 16 23 23 C 1.38290 * 120.10941 * 0.27260 * 22 18 17 24 24 C 1.38121 * 120.05545 * 359.97438 * 23 22 18 25 25 C 1.53774 * 113.61497 * 180.02562 * 5 3 2 26 26 H 1.09007 * 109.47078 * 59.99758 * 1 2 3 27 27 H 1.09001 * 109.47169 * 179.97438 * 1 2 3 28 28 H 1.08996 * 109.47231 * 300.00002 * 1 2 3 29 29 H 1.09000 * 113.61340 * 25.40846 * 7 5 3 30 30 H 1.09003 * 113.66452 * 254.46428 * 7 5 3 31 31 H 1.09000 * 109.47653 * 270.00017 * 11 10 8 32 32 H 1.09001 * 109.47359 * 30.00094 * 11 10 8 33 33 H 1.09004 * 109.47555 * 150.00250 * 11 10 8 34 34 H 1.08999 * 109.46921 * 59.99772 * 14 12 10 35 35 H 1.09001 * 109.47028 * 300.00141 * 14 12 10 36 36 H 1.07994 * 120.02737 * 359.97438 * 17 16 15 37 37 H 1.08991 * 109.47351 * 59.72823 * 19 18 17 38 38 H 0.96708 * 114.00246 * 299.99864 * 20 19 18 39 39 H 1.48506 * 109.99834 * 180.02562 * 21 19 18 40 40 H 1.48502 * 110.00011 * 301.31529 * 21 19 18 41 41 H 1.07993 * 119.94280 * 180.25239 * 22 18 17 42 42 H 1.07996 * 119.97320 * 179.97438 * 23 22 18 43 43 H 1.08006 * 120.02488 * 180.02562 * 24 23 22 44 44 H 1.09004 * 113.61719 * 105.46759 * 25 5 3 45 45 H 1.09006 * 113.61678 * 334.56943 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2749 -0.0006 6 1 4.0239 0.6362 0.7550 7 6 4.1927 1.1223 -1.3986 8 6 5.1808 2.2271 -0.9885 9 1 6.0812 1.8495 -0.5041 10 7 5.4694 3.1835 -2.0599 11 6 4.3971 3.6277 -2.9538 12 6 6.7214 3.6548 -2.2233 13 8 7.6092 3.2867 -1.4835 14 6 7.0185 4.6382 -3.3258 15 8 8.4042 4.9860 -3.2934 16 6 8.8404 5.8705 -4.2284 17 6 10.1748 6.2483 -4.2582 18 6 10.6147 7.1517 -5.2066 19 6 12.0630 7.5670 -5.2360 20 8 12.4072 8.1828 -3.9933 21 14 12.3335 8.7784 -6.6253 22 6 9.7285 7.6706 -6.1322 23 6 8.3988 7.2915 -6.1078 24 6 7.9530 6.3927 -5.1585 25 6 4.1078 2.7141 0.0001 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3633 0.5138 0.8899 29 1 3.5253 1.4126 -2.2101 30 1 4.6645 0.1536 -1.5633 31 1 4.3407 2.9600 -3.8135 32 1 3.4477 3.6117 -2.4185 33 1 4.6049 4.6420 -3.2947 34 1 6.4158 5.5354 -3.1845 35 1 6.7790 4.1876 -4.2889 36 1 10.8682 5.8402 -3.5380 37 1 12.6897 6.6891 -5.3923 38 1 11.8880 8.9726 -3.7885 39 1 13.7583 9.1953 -6.6654 40 1 11.9490 8.1607 -7.9198 41 1 10.0751 8.3735 -6.8752 42 1 7.7083 7.6986 -6.8316 43 1 6.9145 6.0966 -5.1402 44 1 4.5113 3.0285 0.9627 45 1 3.4172 3.4407 -0.4280 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12109654_4860298.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:45:28 Heat of formation + Delta-G solvation = -115.598348 kcal Electronic energy + Delta-G solvation = -28285.478688 eV Core-core repulsion = 24044.000820 eV Total energy + Delta-G solvation = -4241.477868 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.17772 -41.52223 -40.82851 -39.49383 -38.69485 -37.40829 -37.19521 -35.77524 -32.49338 -31.74489 -30.02485 -29.11946 -28.35868 -27.06158 -26.91602 -26.44689 -23.69380 -23.19675 -22.12001 -20.82302 -20.30757 -19.47397 -18.88469 -18.31559 -18.05826 -17.67459 -17.51746 -17.42709 -17.30750 -16.99541 -16.36293 -16.31768 -16.13307 -15.91712 -15.32472 -15.02033 -14.72725 -14.45588 -14.37669 -14.30257 -14.17136 -14.00207 -13.81533 -13.56902 -13.50604 -13.35886 -13.07804 -12.97360 -12.61946 -12.57525 -12.31121 -12.19314 -11.94780 -11.89614 -11.84568 -11.66776 -11.41528 -10.88095 -10.49436 -9.93629 -9.88232 -9.28858 -5.03266 0.17861 0.38084 1.07143 1.21728 1.32354 1.38276 1.63478 1.68847 1.97107 2.34857 2.64926 3.04216 3.17448 3.25682 3.47172 3.48254 3.58719 3.61538 3.65787 3.78227 3.84977 3.88235 3.91976 3.98560 4.10716 4.16398 4.18163 4.20764 4.32679 4.33701 4.37569 4.41766 4.48199 4.52516 4.54083 4.58373 4.62947 4.76999 4.94832 4.96706 5.20350 5.26707 5.32737 5.33479 5.41760 5.62703 6.05592 6.30392 6.58366 6.66438 6.95156 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.504 6.504 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.131 4.131 8 C 0.126 3.874 9 H 0.131 0.869 10 N -0.603 5.603 11 C 0.066 3.934 12 C 0.519 3.481 13 O -0.509 6.509 14 C 0.043 3.957 15 O -0.289 6.289 16 C 0.129 3.871 17 C -0.120 4.120 18 C -0.080 4.080 19 C -0.071 4.071 20 O -0.538 6.538 21 Si 0.694 3.306 22 C -0.154 4.154 23 C -0.072 4.072 24 C -0.207 4.207 25 C -0.132 4.132 26 H 0.064 0.936 27 H 0.104 0.896 28 H 0.064 0.936 29 H 0.094 0.906 30 H 0.093 0.907 31 H 0.065 0.935 32 H 0.082 0.918 33 H 0.075 0.925 34 H 0.095 0.905 35 H 0.095 0.905 36 H 0.136 0.864 37 H 0.116 0.884 38 H 0.380 0.620 39 H -0.255 1.255 40 H -0.258 1.258 41 H 0.129 0.871 42 H 0.131 0.869 43 H 0.129 0.871 44 H 0.088 0.912 45 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.949 0.839 -3.194 6.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.391 6.391 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.169 4.169 8 C 0.022 3.978 9 H 0.149 0.851 10 N -0.338 5.338 11 C -0.077 4.077 12 C 0.306 3.694 13 O -0.383 6.383 14 C -0.036 4.036 15 O -0.201 6.201 16 C 0.084 3.916 17 C -0.139 4.139 18 C -0.080 4.080 19 C -0.181 4.181 20 O -0.343 6.343 21 Si 0.596 3.404 22 C -0.172 4.172 23 C -0.090 4.090 24 C -0.225 4.225 25 C -0.171 4.171 26 H 0.082 0.918 27 H 0.122 0.878 28 H 0.083 0.917 29 H 0.112 0.888 30 H 0.111 0.889 31 H 0.083 0.917 32 H 0.100 0.900 33 H 0.094 0.906 34 H 0.113 0.887 35 H 0.113 0.887 36 H 0.154 0.846 37 H 0.133 0.867 38 H 0.227 0.773 39 H -0.180 1.180 40 H -0.183 1.183 41 H 0.147 0.853 42 H 0.149 0.851 43 H 0.147 0.853 44 H 0.107 0.893 45 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -4.719 0.516 -3.382 5.828 hybrid contribution -0.816 -0.619 0.060 1.026 sum -5.535 -0.103 -3.322 6.456 Atomic orbital electron populations 1.23334 0.75861 1.04075 1.02719 1.86524 1.23776 1.33249 1.83743 1.23459 0.91527 0.81445 0.72091 1.90684 1.66959 1.36436 1.45069 1.22337 0.87738 1.01228 1.01525 0.84968 1.23433 0.97778 1.00707 0.94991 1.22589 0.98326 0.88949 0.87920 0.85115 1.47643 1.08241 1.45041 1.32884 1.21949 0.91387 1.00327 0.94012 1.20056 0.82377 0.81825 0.85157 1.90781 1.44638 1.57781 1.45071 1.22521 0.83056 0.98961 0.99067 1.86170 1.24531 1.58521 1.50905 1.19046 0.93574 0.90160 0.88813 1.20273 0.93047 0.99666 1.00922 1.20166 0.96163 0.96431 0.95245 1.25134 0.93045 1.03586 0.96384 1.86525 1.63553 1.46191 1.38046 0.94639 0.83144 0.86312 0.76289 1.20949 0.93829 1.02339 1.00101 1.20904 0.95458 0.95557 0.97111 1.21286 0.99767 1.02855 0.98621 1.23492 0.97554 0.94753 1.01290 0.91766 0.87793 0.91684 0.88756 0.88867 0.91682 0.89979 0.90598 0.88693 0.88741 0.84582 0.86669 0.77305 1.17957 1.18287 0.85344 0.85077 0.85308 0.89343 0.87893 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.02 16 2 O -0.36 -0.24 10.57 -39.26 -0.41 -0.65 16 3 C 0.47 0.42 7.49 36.01 0.27 0.69 16 4 O -0.50 -1.78 15.65 -18.75 -0.29 -2.07 16 5 C -0.11 0.19 4.26 -90.88 -0.39 -0.20 16 6 H 0.13 -0.43 8.14 -51.93 -0.42 -0.86 16 7 C -0.13 0.33 7.09 -25.83 -0.18 0.15 16 8 C 0.13 -0.15 4.21 -67.10 -0.28 -0.43 16 9 H 0.13 0.00 7.21 -51.93 -0.37 -0.38 16 10 N -0.60 0.63 3.08 -172.99 -0.53 0.09 16 11 C 0.07 -0.27 8.84 59.84 0.53 0.26 16 12 C 0.52 0.89 7.75 -10.99 -0.09 0.80 16 13 O -0.51 -3.20 15.97 -14.36 -0.23 -3.43 16 14 C 0.04 -0.02 3.77 36.00 0.14 0.11 16 15 O -0.29 -0.92 9.67 -39.34 -0.38 -1.30 16 16 C 0.13 0.26 6.69 -39.22 -0.26 0.00 16 17 C -0.12 -0.29 9.56 -39.43 -0.38 -0.66 16 18 C -0.08 -0.06 5.39 -104.64 -0.56 -0.63 16 19 C -0.07 -0.02 2.82 36.01 0.10 0.08 16 20 O -0.54 -0.49 12.77 -35.23 -0.45 -0.94 16 21 Si 0.69 -0.68 29.79 -169.99 -5.06 -5.74 16 22 C -0.15 0.07 8.67 -39.56 -0.34 -0.27 16 23 C -0.07 0.07 10.04 -39.61 -0.40 -0.33 16 24 C -0.21 0.08 9.04 -39.43 -0.36 -0.28 16 25 C -0.13 0.18 6.94 -25.91 -0.18 0.00 16 26 H 0.06 -0.09 8.14 -51.92 -0.42 -0.51 16 27 H 0.10 -0.36 8.14 -51.93 -0.42 -0.79 16 28 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 29 H 0.09 -0.27 6.77 -51.93 -0.35 -0.62 16 30 H 0.09 -0.29 8.14 -51.93 -0.42 -0.72 16 31 H 0.06 -0.33 8.14 -51.93 -0.42 -0.76 16 32 H 0.08 -0.33 6.33 -51.93 -0.33 -0.66 16 33 H 0.08 -0.43 6.44 -51.93 -0.33 -0.77 16 34 H 0.10 -0.29 6.92 -51.93 -0.36 -0.65 16 35 H 0.09 -0.28 7.63 -51.93 -0.40 -0.68 16 36 H 0.14 0.42 8.06 -52.49 -0.42 0.00 16 37 H 0.12 0.09 7.96 -51.93 -0.41 -0.32 16 38 H 0.38 -1.16 8.70 45.56 0.40 -0.76 16 39 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 40 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 41 H 0.13 -0.30 4.87 -52.49 -0.26 -0.56 16 42 H 0.13 -0.44 8.06 -52.49 -0.42 -0.86 16 43 H 0.13 -0.39 6.30 -52.48 -0.33 -0.72 16 44 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 45 H 0.10 -0.06 6.11 -51.93 -0.32 -0.38 16 LS Contribution 373.16 15.07 5.62 5.62 Total: 0.00 -11.09 373.16 -9.12 -20.21 By element: Atomic # 1 Polarization: -6.03 SS G_CDS: -6.07 Total: -12.10 kcal Atomic # 6 Polarization: 1.63 SS G_CDS: -1.31 Total: 0.31 kcal Atomic # 7 Polarization: 0.63 SS G_CDS: -0.53 Total: 0.09 kcal Atomic # 8 Polarization: -6.63 SS G_CDS: -1.77 Total: -8.40 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: -5.06 Total: -5.74 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -11.09 -9.12 -20.21 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12109654_4860298.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.390 kcal (2) G-P(sol) polarization free energy of solvation -11.085 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.475 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.123 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.208 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.598 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds