Wall clock time and date at job start Tue Mar 9 2021 14:46:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34225 * 116.99811 * 2 1 4 4 O 1.20823 * 120.00488 * 0.02562 * 3 2 1 5 5 C 1.50698 * 119.99623 * 180.02562 * 3 2 1 6 6 H 1.09001 * 112.85289 * 48.80651 * 5 3 2 7 7 C 1.53784 * 113.61190 * 179.97438 * 5 3 2 8 8 C 1.53784 * 87.07868 * 139.98243 * 7 5 3 9 9 H 1.08999 * 113.61496 * 89.20417 * 8 7 5 10 10 N 1.46506 * 113.61256 * 220.01747 * 8 7 5 11 11 C 1.46499 * 119.99987 * 54.47461 * 10 8 7 12 12 C 1.34778 * 119.99928 * 234.47557 * 10 8 7 13 13 O 1.21597 * 120.00175 * 5.05698 * 12 10 8 14 14 C 1.47527 * 119.99695 * 185.06512 * 12 10 8 15 15 C 1.36601 * 125.76741 * 175.20253 * 14 12 10 16 16 N 1.34814 * 106.83354 * 179.89519 * 15 14 12 17 17 C 1.46502 * 126.59004 * 180.13128 * 16 15 14 18 18 C 1.53005 * 109.47060 * 125.29630 * 17 16 15 19 19 O 1.42898 * 109.46835 * 179.97438 * 18 17 16 20 20 C 1.35927 * 116.99776 * 179.97438 * 19 18 17 21 21 C 1.38810 * 120.06177 * 180.02562 * 20 19 18 22 22 Cl 1.73602 * 120.03734 * 0.02562 * 21 20 19 23 23 C 1.38260 * 119.92725 * 180.02562 * 21 20 19 24 24 C 1.38246 * 120.03610 * 359.97438 * 23 21 20 25 25 C 1.50700 * 119.93609 * 180.02562 * 24 23 21 26 26 O 1.42907 * 109.46972 * 65.00139 * 25 24 23 27 27 Si 1.86300 * 109.47322 * 185.00002 * 25 24 23 28 28 C 1.38276 * 120.12282 * 0.02562 * 24 23 21 29 29 C 1.38151 * 120.07763 * 359.72316 * 28 24 23 30 30 N 1.40211 * 106.81460 * 0.35708 * 16 15 14 31 31 N 1.28756 * 108.36532 * 359.77246 * 30 16 15 32 32 C 1.53778 * 87.08334 * 334.56573 * 8 7 5 33 33 H 1.09004 * 109.46655 * 299.99786 * 1 2 3 34 34 H 1.08991 * 109.47223 * 59.99585 * 1 2 3 35 35 H 1.08997 * 109.47218 * 179.97438 * 1 2 3 36 36 H 1.08992 * 113.61837 * 25.43730 * 7 5 3 37 37 H 1.09005 * 113.61607 * 254.52701 * 7 5 3 38 38 H 1.08996 * 109.46912 * 235.09864 * 11 10 8 39 39 H 1.08998 * 109.46883 * 115.09579 * 11 10 8 40 40 H 1.09003 * 109.47277 * 355.09815 * 11 10 8 41 41 H 1.07990 * 126.58111 * 0.03758 * 15 14 12 42 42 H 1.08995 * 109.46930 * 245.29338 * 17 16 15 43 43 H 1.08998 * 109.47401 * 5.29175 * 17 16 15 44 44 H 1.09000 * 109.46679 * 299.99966 * 18 17 16 45 45 H 1.08995 * 109.46948 * 59.99761 * 18 17 16 46 46 H 1.07997 * 119.98024 * 179.97438 * 23 21 20 47 47 H 1.09001 * 109.47837 * 305.00703 * 25 24 23 48 48 H 0.96698 * 113.99927 * 179.97438 * 26 25 24 49 49 H 1.48495 * 109.99962 * 300.00513 * 27 25 24 50 50 H 1.48500 * 109.99861 * 61.32272 * 27 25 24 51 51 H 1.08001 * 119.95998 * 180.02562 * 28 24 23 52 52 H 1.08003 * 120.02457 * 180.29685 * 29 28 24 53 53 H 1.09000 * 113.61634 * 139.97874 * 32 8 7 54 54 H 1.09000 * 113.61768 * 270.88563 * 32 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0233 0.6365 -0.7567 7 6 4.1077 2.7142 -0.0011 8 6 5.1814 2.2270 0.9862 9 1 6.0816 1.8496 0.5011 10 7 5.4709 3.1835 2.0574 11 6 4.3842 3.6947 2.8964 12 6 6.7370 3.5931 2.2711 13 8 7.6250 3.2415 1.5185 14 6 7.0455 4.4681 3.4182 15 6 8.2924 4.8765 3.7982 16 7 8.1327 5.6603 4.8833 17 6 9.1929 6.3307 5.6401 18 6 8.8915 7.8285 5.7229 19 8 9.9254 8.4823 6.4615 20 6 9.8093 9.8263 6.6283 21 6 10.7780 10.5255 7.3350 22 17 12.1401 9.6847 8.0067 23 6 10.6568 11.8925 7.5033 24 6 9.5723 12.5622 6.9679 25 6 9.4428 14.0523 7.1523 26 8 10.5122 14.7113 6.4709 27 14 7.8140 14.6254 6.4527 28 6 8.6063 11.8674 6.2636 29 6 8.7252 10.5023 6.0880 30 7 6.7572 5.7063 5.1515 31 7 6.1478 4.9934 4.2693 32 6 4.1916 1.1238 1.3962 33 1 -0.3633 0.5138 0.8901 34 1 -0.3633 0.5139 -0.8899 35 1 -0.3633 -1.0276 -0.0005 36 1 3.4175 3.4405 0.4279 37 1 4.5105 3.0289 -0.9639 38 1 4.3851 4.7843 2.8681 39 1 4.5284 3.3578 3.9229 40 1 3.4304 3.3223 2.5224 41 1 9.2266 4.6222 3.3197 42 1 9.2407 5.9136 6.6459 43 1 10.1487 6.1796 5.1383 44 1 8.8437 8.2456 4.7170 45 1 7.9358 7.9795 6.2247 46 1 11.4098 12.4373 8.0534 47 1 9.4866 14.2922 8.2147 48 1 10.4921 15.6751 6.5466 49 1 7.7420 14.3041 5.0047 50 1 6.6930 13.9714 7.1744 51 1 7.7604 12.3933 5.8461 52 1 7.9726 9.9612 5.5337 53 1 4.6620 0.1545 1.5615 54 1 3.5243 1.4153 2.2072 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12109654_7143556.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:46:05 Heat of formation + Delta-G solvation = -11.294128 kcal Electronic energy + Delta-G solvation = -40584.463951 eV Core-core repulsion = 34940.140250 eV Total energy + Delta-G solvation = -5644.323701 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 451.143 amu Computer time = 1.82 seconds Orbital eigenvalues (eV) -43.43417 -42.07572 -41.64008 -40.87549 -39.49431 -39.15897 -37.79692 -37.47945 -37.20229 -36.35121 -35.47804 -32.67475 -32.19986 -32.08474 -30.81718 -29.47375 -28.17770 -27.15557 -26.83006 -26.70618 -25.82289 -24.71618 -24.11973 -22.88950 -22.54644 -22.29013 -20.94880 -20.24164 -19.89151 -19.01313 -18.54413 -18.43314 -18.10965 -17.96993 -17.66547 -17.48630 -17.32483 -17.20482 -17.11292 -16.71677 -16.26830 -16.19950 -16.10926 -15.72769 -15.56110 -15.28290 -15.07483 -15.06803 -14.81721 -14.42260 -14.29795 -14.15727 -14.14764 -14.00457 -13.87781 -13.67666 -13.57645 -13.48915 -13.30198 -13.11656 -12.97799 -12.83864 -12.63538 -12.48096 -12.39305 -12.24568 -12.19252 -12.13901 -12.05396 -11.87142 -11.85898 -11.75680 -11.52822 -11.44098 -11.24319 -10.51481 -10.35583 -10.16838 -9.75558 -9.47548 -4.96704 -0.22082 -0.07354 -0.03319 0.48515 0.66391 0.94523 1.04803 1.29452 1.58166 1.62027 1.86085 1.92665 1.93587 2.05968 2.20076 2.97625 3.13104 3.19789 3.27361 3.32612 3.38085 3.50613 3.53685 3.54982 3.62779 3.74001 3.80653 3.83318 3.89001 3.92748 3.97771 4.00968 4.14280 4.16697 4.25809 4.27759 4.28997 4.31938 4.43904 4.48445 4.50513 4.52534 4.56118 4.61044 4.65814 4.67636 4.68321 4.77436 4.78474 4.89177 4.97625 5.05270 5.14246 5.19251 5.29993 5.31728 5.44162 5.85740 6.14586 6.63947 6.69039 6.89422 6.94925 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.471 3.529 4 O -0.538 6.538 5 C -0.102 4.102 6 H 0.156 0.844 7 C -0.132 4.132 8 C 0.122 3.878 9 H 0.131 0.869 10 N -0.591 5.591 11 C 0.090 3.910 12 C 0.605 3.395 13 O -0.562 6.562 14 C -0.124 4.124 15 C 0.121 3.879 16 N -0.351 5.351 17 C 0.126 3.874 18 C 0.045 3.955 19 O -0.301 6.301 20 C 0.139 3.861 21 C -0.076 4.076 22 Cl -0.051 7.051 23 C -0.048 4.048 24 C -0.110 4.110 25 C -0.074 4.074 26 O -0.563 6.563 27 Si 0.770 3.230 28 C -0.091 4.091 29 C -0.190 4.190 30 N -0.088 5.088 31 N -0.209 5.209 32 C -0.123 4.123 33 H 0.061 0.939 34 H 0.060 0.940 35 H 0.128 0.872 36 H 0.089 0.911 37 H 0.091 0.909 38 H 0.067 0.933 39 H 0.068 0.932 40 H 0.081 0.919 41 H 0.238 0.762 42 H 0.125 0.875 43 H 0.151 0.849 44 H 0.079 0.921 45 H 0.080 0.920 46 H 0.156 0.844 47 H 0.099 0.901 48 H 0.405 0.595 49 H -0.295 1.295 50 H -0.287 1.287 51 H 0.129 0.871 52 H 0.155 0.845 53 H 0.108 0.892 54 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.581 1.996 1.985 2.874 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.277 6.277 3 C 0.315 3.685 4 O -0.427 6.427 5 C -0.121 4.121 6 H 0.174 0.826 7 C -0.170 4.170 8 C 0.019 3.981 9 H 0.149 0.851 10 N -0.320 5.320 11 C -0.052 4.052 12 C 0.392 3.608 13 O -0.440 6.440 14 C -0.263 4.263 15 C -0.036 4.036 16 N -0.137 5.137 17 C 0.005 3.995 18 C -0.031 4.031 19 O -0.213 6.213 20 C 0.092 3.908 21 C -0.104 4.104 22 Cl -0.022 7.022 23 C -0.066 4.066 24 C -0.111 4.111 25 C -0.184 4.184 26 O -0.374 6.374 27 Si 0.676 3.324 28 C -0.109 4.109 29 C -0.209 4.209 30 N -0.068 5.068 31 N -0.083 5.083 32 C -0.161 4.161 33 H 0.080 0.920 34 H 0.079 0.921 35 H 0.147 0.853 36 H 0.107 0.893 37 H 0.110 0.890 38 H 0.085 0.915 39 H 0.087 0.913 40 H 0.100 0.900 41 H 0.255 0.745 42 H 0.143 0.857 43 H 0.169 0.831 44 H 0.098 0.902 45 H 0.098 0.902 46 H 0.174 0.826 47 H 0.117 0.883 48 H 0.256 0.744 49 H -0.223 1.223 50 H -0.214 1.214 51 H 0.147 0.853 52 H 0.173 0.827 53 H 0.126 0.874 54 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -0.554 1.643 2.167 2.775 hybrid contribution 0.405 -0.638 -0.445 0.877 sum -0.150 1.005 1.723 2.000 Atomic orbital electron populations 1.23526 0.75069 1.05605 1.02421 1.86521 1.24717 1.33048 1.83463 1.23976 0.92474 0.81031 0.70982 1.90673 1.67882 1.37457 1.46702 1.22417 0.85996 1.01129 1.02534 0.82631 1.23456 0.97268 0.94987 1.01300 1.22689 0.98411 0.89219 0.87825 0.85141 1.47634 1.06859 1.43832 1.33719 1.21885 0.89196 0.99783 0.94342 1.16940 0.82643 0.78824 0.82386 1.90802 1.46801 1.58856 1.47576 1.21442 0.90988 1.10942 1.02923 1.23899 1.01674 0.90717 0.87335 1.50343 1.08373 1.33825 1.21118 1.21897 0.87929 0.89848 0.99806 1.22992 0.90856 0.92068 0.97203 1.86001 1.47424 1.16924 1.70943 1.18602 0.93690 0.83054 0.95463 1.20374 0.92438 0.92842 1.04714 1.98386 1.42159 1.77868 1.83791 1.20956 0.97561 0.90554 0.97545 1.19566 0.95511 0.95621 1.00378 1.24743 1.02199 0.89522 1.01928 1.86446 1.49086 1.26018 1.75822 0.94195 0.72582 0.89376 0.76214 1.20988 0.98533 0.94419 0.96970 1.21304 0.99228 0.95232 1.05111 1.82010 0.85080 1.20394 1.19291 1.74835 1.27209 1.05362 1.00924 1.23402 0.97235 1.00945 0.94535 0.92036 0.92104 0.85343 0.89275 0.88989 0.91467 0.91302 0.90003 0.74532 0.85706 0.83133 0.90245 0.90165 0.82619 0.88294 0.74357 1.22273 1.21386 0.85337 0.82737 0.87378 0.89010 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.17 16 2 O -0.36 -0.93 10.57 -51.37 -0.54 -1.47 16 3 C 0.47 1.77 7.48 71.24 0.53 2.31 16 4 O -0.54 -5.44 15.65 21.97 0.34 -5.10 16 5 C -0.10 0.23 4.26 -11.01 -0.05 0.18 16 6 H 0.16 -1.09 8.14 -2.39 -0.02 -1.11 16 7 C -0.13 0.03 6.88 31.12 0.21 0.25 16 8 C 0.12 -0.04 4.23 45.52 0.19 0.15 16 9 H 0.13 0.02 7.20 -2.39 -0.02 0.01 16 10 N -0.59 -1.65 3.09 -823.39 -2.54 -4.20 16 11 C 0.09 0.11 7.94 127.77 1.01 1.13 16 12 C 0.60 3.56 7.67 86.69 0.66 4.23 16 13 O -0.56 -5.64 16.34 -4.02 -0.07 -5.71 16 14 C -0.12 -0.45 6.76 40.82 0.28 -0.17 16 15 C 0.12 -0.28 11.28 83.85 0.95 0.67 16 16 N -0.35 0.89 3.69 -347.10 -1.28 -0.39 16 17 C 0.13 -1.01 6.91 86.38 0.60 -0.41 16 18 C 0.04 -0.20 4.94 71.98 0.36 0.15 16 19 O -0.30 -0.06 9.60 -92.73 -0.89 -0.95 16 20 C 0.14 0.44 6.68 22.52 0.15 0.59 16 21 C -0.08 -0.33 6.33 22.41 0.14 -0.19 16 22 Cl -0.05 -0.21 28.50 -2.72 -0.08 -0.29 16 23 C -0.05 -0.15 9.46 22.28 0.21 0.06 16 24 C -0.11 -0.32 5.38 -19.85 -0.11 -0.43 16 25 C -0.07 0.18 2.79 71.24 0.20 0.38 16 26 O -0.56 1.16 12.81 -148.98 -1.91 -0.75 16 27 Si 0.77 -2.73 29.85 68.60 2.05 -0.68 16 28 C -0.09 -0.31 8.66 22.26 0.19 -0.11 16 29 C -0.19 -0.40 9.04 22.36 0.20 -0.19 16 30 N -0.09 -0.35 13.65 37.02 0.51 0.15 16 31 N -0.21 -1.11 8.91 -49.99 -0.45 -1.55 16 32 C -0.12 0.40 7.03 31.12 0.22 0.62 16 33 H 0.06 -0.03 8.13 -2.39 -0.02 -0.05 16 34 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 35 H 0.13 -0.85 8.14 -2.39 -0.02 -0.87 16 36 H 0.09 0.27 6.30 -2.39 -0.02 0.26 16 37 H 0.09 -0.11 8.14 -2.38 -0.02 -0.13 16 38 H 0.07 0.21 7.13 -2.39 -0.02 0.19 16 39 H 0.07 0.12 7.39 -2.39 -0.02 0.10 16 40 H 0.08 -0.03 5.69 -2.39 -0.01 -0.04 16 41 H 0.24 -2.17 8.06 -2.92 -0.02 -2.20 16 42 H 0.12 -1.15 8.14 -2.39 -0.02 -1.17 16 43 H 0.15 -2.04 8.08 -2.39 -0.02 -2.06 16 44 H 0.08 -0.41 7.65 -2.39 -0.02 -0.43 16 45 H 0.08 -0.27 7.67 -2.39 -0.02 -0.28 16 46 H 0.16 0.09 8.06 -2.91 -0.02 0.06 16 47 H 0.10 -0.67 7.96 -2.39 -0.02 -0.69 16 48 H 0.40 -5.04 8.74 -74.06 -0.65 -5.69 16 49 H -0.29 -1.12 7.05 99.48 0.70 -0.42 16 50 H -0.29 -0.54 7.11 99.48 0.71 0.17 16 51 H 0.13 0.30 4.86 -2.91 -0.01 0.29 16 52 H 0.16 -0.27 6.30 -2.91 -0.02 -0.29 16 53 H 0.11 -0.65 8.14 -2.39 -0.02 -0.67 16 54 H 0.09 -0.21 6.42 -2.39 -0.02 -0.23 16 Total: 0.00 -28.52 465.57 2.67 -25.85 By element: Atomic # 1 Polarization: -15.68 SS G_CDS: 0.37 Total: -15.30 kcal Atomic # 6 Polarization: 3.23 SS G_CDS: 7.15 Total: 10.38 kcal Atomic # 7 Polarization: -2.22 SS G_CDS: -3.76 Total: -5.98 kcal Atomic # 8 Polarization: -10.92 SS G_CDS: -3.06 Total: -13.98 kcal Atomic # 14 Polarization: -2.73 SS G_CDS: 2.05 Total: -0.68 kcal Atomic # 17 Polarization: -0.21 SS G_CDS: -0.08 Total: -0.29 kcal Total: -28.52 2.67 -25.85 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12109654_7143556.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.558 kcal (2) G-P(sol) polarization free energy of solvation -28.520 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.962 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.668 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.852 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.294 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.82 seconds