Wall clock time and date at job start Tue Mar 9 2021 14:47:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52999 * 109.47079 * 2 1 4 4 C 1.53001 * 109.47295 * 240.00403 * 2 1 3 5 5 O 1.42899 * 109.47606 * 119.99815 * 2 1 3 6 6 C 1.42905 * 113.99466 * 60.00150 * 5 2 1 7 7 H 1.08993 * 112.85382 * 341.19633 * 6 5 2 8 8 C 1.53778 * 113.69001 * 112.47008 * 6 5 2 9 9 C 1.53776 * 87.08535 * 139.98851 * 8 6 5 10 10 H 1.09002 * 113.69145 * 220.00974 * 9 8 6 11 11 N 1.46503 * 113.61451 * 89.11067 * 9 8 6 12 12 C 1.34777 * 119.99402 * 107.50768 * 11 9 8 13 13 O 1.21564 * 120.00299 * 359.97438 * 12 11 9 14 14 C 1.47699 * 119.99480 * 179.97438 * 12 11 9 15 15 C 1.39805 * 120.15412 * 180.25145 * 14 12 11 16 16 F 1.35104 * 120.08343 * 0.04420 * 15 14 12 17 17 C 1.38311 * 119.83264 * 180.27886 * 15 14 12 18 18 C 1.38190 * 120.14163 * 359.48970 * 17 15 14 19 19 C 1.50705 * 119.83888 * 180.25800 * 18 17 15 20 20 O 1.42898 * 109.47146 * 15.00409 * 19 18 17 21 21 Si 1.86305 * 109.46884 * 135.00389 * 19 18 17 22 22 C 1.38655 * 120.31813 * 0.23769 * 18 17 15 23 23 F 1.35099 * 119.91883 * 179.97438 * 22 18 17 24 24 C 1.38065 * 120.16530 * 0.02562 * 22 18 17 25 25 C 1.53781 * 87.08008 * 334.56374 * 9 8 6 26 26 H 1.09000 * 109.46637 * 299.99813 * 1 2 3 27 27 H 1.08994 * 109.47450 * 60.00277 * 1 2 3 28 28 H 1.09001 * 109.47048 * 180.02562 * 1 2 3 29 29 H 1.08999 * 109.47736 * 180.02562 * 3 2 1 30 30 H 1.09006 * 109.47114 * 299.99973 * 3 2 1 31 31 H 1.09004 * 109.47361 * 59.99804 * 3 2 1 32 32 H 1.09001 * 109.46418 * 299.99584 * 4 2 1 33 33 H 1.08994 * 109.47427 * 59.99305 * 4 2 1 34 34 H 1.09001 * 109.47336 * 179.97438 * 4 2 1 35 35 H 1.09007 * 113.61620 * 25.43631 * 8 6 5 36 36 H 1.09008 * 113.61242 * 254.53808 * 8 6 5 37 37 H 0.96997 * 120.00374 * 287.50271 * 11 9 8 38 38 H 1.08002 * 119.93147 * 179.77586 * 17 15 14 39 39 H 1.09001 * 109.46867 * 255.00112 * 19 18 17 40 40 H 0.96698 * 114.00043 * 59.99805 * 20 19 18 41 41 H 1.48497 * 109.99990 * 58.68186 * 21 19 18 42 42 H 1.48497 * 109.99948 * 180.02562 * 21 19 18 43 43 H 1.07993 * 120.07947 * 179.97438 * 24 22 18 44 44 H 1.09004 * 113.61572 * 139.97994 * 25 9 8 45 45 H 1.09001 * 113.61980 * 270.88476 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0064 -0.6736 1.1668 6 6 1.5848 -2.0355 1.2644 7 1 0.7237 -2.2583 0.6344 8 6 2.7321 -3.0493 1.1206 9 6 2.0544 -3.8565 2.2404 10 1 2.7554 -4.2889 2.9544 11 7 1.0695 -4.8250 1.7522 12 6 1.3482 -6.1432 1.7831 13 8 2.4170 -6.5286 2.2156 14 6 0.3551 -7.1197 1.2914 15 6 0.6386 -8.4882 1.3268 16 9 1.8225 -8.9222 1.8121 17 6 -0.2939 -9.3964 0.8593 18 6 -1.5075 -8.9542 0.3680 19 6 -2.5209 -9.9501 -0.1342 20 8 -2.1631 -11.2598 0.3115 21 14 -4.2060 -9.5081 0.5262 22 6 -1.7973 -7.5987 0.3353 23 9 -2.9860 -7.1752 -0.1472 24 6 -0.8737 -6.6805 0.7937 25 6 1.4335 -2.5311 2.7124 26 1 -0.3632 0.5138 0.8900 27 1 -0.3634 0.5137 -0.8899 28 1 -0.3633 -1.0277 0.0005 29 1 3.1300 1.4426 -0.0005 30 1 1.6766 1.9563 -0.8900 31 1 1.6766 1.9564 0.8900 32 1 1.6767 -1.7488 -1.2492 33 1 1.6767 -0.2074 -2.1392 34 1 3.1301 -0.7208 -1.2495 35 1 3.7066 -2.6485 1.3996 36 1 2.7438 -3.5619 0.1586 37 1 0.2169 -4.5175 1.4067 38 1 -0.0751 -10.4537 0.8826 39 1 -2.5409 -9.9299 -1.2239 40 1 -2.1256 -11.3513 1.2734 41 1 -4.5761 -8.1358 0.0960 42 1 -5.2143 -10.4831 0.0386 43 1 -1.1007 -5.6250 0.7672 44 1 0.3967 -2.6253 3.0355 45 1 2.0528 -1.9886 3.4266 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12113340_12360598.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:47:24 Heat of formation + Delta-G solvation = -134.137927 kcal Electronic energy + Delta-G solvation = -30374.605294 eV Core-core repulsion = 25803.468444 eV Total energy + Delta-G solvation = -4571.136850 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.148 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -50.51454 -49.98507 -41.71937 -40.74094 -39.84375 -38.35630 -37.73872 -34.83784 -33.71472 -32.64957 -31.50462 -28.59750 -28.48086 -28.11242 -26.76243 -25.59595 -24.31726 -23.79933 -22.10756 -21.34027 -20.50229 -19.70163 -19.13380 -18.55046 -17.98571 -17.82388 -17.51314 -17.29548 -16.77638 -16.74846 -16.63222 -16.14180 -16.04982 -15.84807 -15.81035 -15.69109 -15.33194 -14.78628 -14.69199 -14.46261 -14.19818 -14.17709 -13.76651 -13.61324 -13.49895 -13.31095 -13.23161 -13.04471 -12.96283 -12.92312 -12.75404 -12.66475 -12.57320 -11.84081 -11.70668 -11.56884 -11.35022 -11.10978 -11.07884 -10.47137 -10.35756 -10.21541 -9.77619 -5.14634 -0.83837 -0.38022 1.02187 1.44153 1.54442 1.76558 1.89427 2.25349 2.63385 2.70584 2.75128 2.99358 3.06116 3.31908 3.35182 3.42732 3.46141 3.68987 3.73723 3.77034 3.79890 3.88798 3.99579 4.03429 4.21183 4.26758 4.28611 4.46324 4.51050 4.54728 4.63893 4.65898 4.66853 4.68349 4.70619 4.74304 4.75968 4.81313 4.85055 4.90406 4.97450 5.05181 5.21657 5.25653 5.32830 5.39210 6.20984 6.24943 6.31687 6.97590 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.176 4.176 5 O -0.359 6.359 6 C 0.060 3.940 7 H 0.088 0.912 8 C -0.165 4.165 9 C 0.120 3.880 10 H 0.115 0.885 11 N -0.709 5.709 12 C 0.563 3.437 13 O -0.510 6.510 14 C -0.151 4.151 15 C 0.163 3.837 16 F -0.105 7.105 17 C -0.125 4.125 18 C -0.090 4.090 19 C -0.072 4.072 20 O -0.534 6.534 21 Si 0.688 3.312 22 C 0.075 3.925 23 F -0.118 7.118 24 C -0.085 4.085 25 C -0.142 4.142 26 H 0.066 0.934 27 H 0.068 0.932 28 H 0.057 0.943 29 H 0.064 0.936 30 H 0.071 0.929 31 H 0.064 0.936 32 H 0.057 0.943 33 H 0.066 0.934 34 H 0.065 0.935 35 H 0.102 0.898 36 H 0.073 0.927 37 H 0.399 0.601 38 H 0.164 0.836 39 H 0.130 0.870 40 H 0.383 0.617 41 H -0.226 1.226 42 H -0.256 1.256 43 H 0.150 0.850 44 H 0.078 0.922 45 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.169 2.231 0.266 4.736 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.066 3.934 3 C -0.197 4.197 4 C -0.234 4.234 5 O -0.278 6.278 6 C 0.002 3.998 7 H 0.106 0.894 8 C -0.204 4.204 9 C 0.015 3.985 10 H 0.133 0.867 11 N -0.361 5.361 12 C 0.350 3.650 13 O -0.385 6.385 14 C -0.155 4.155 15 C 0.142 3.858 16 F -0.083 7.083 17 C -0.143 4.143 18 C -0.092 4.092 19 C -0.181 4.181 20 O -0.340 6.340 21 Si 0.586 3.414 22 C 0.055 3.945 23 F -0.096 7.096 24 C -0.105 4.105 25 C -0.180 4.180 26 H 0.085 0.915 27 H 0.087 0.913 28 H 0.076 0.924 29 H 0.083 0.917 30 H 0.089 0.911 31 H 0.083 0.917 32 H 0.076 0.924 33 H 0.085 0.915 34 H 0.084 0.916 35 H 0.120 0.880 36 H 0.091 0.909 37 H 0.235 0.765 38 H 0.181 0.819 39 H 0.147 0.853 40 H 0.231 0.769 41 H -0.149 1.149 42 H -0.181 1.181 43 H 0.167 0.833 44 H 0.097 0.903 45 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -4.058 2.172 -0.116 4.604 hybrid contribution -0.097 0.086 -0.994 1.002 sum -4.154 2.258 -1.110 4.857 Atomic orbital electron populations 1.22470 0.95666 1.02289 1.03189 1.21548 0.93064 0.93338 0.85492 1.21772 1.02110 0.93120 1.02649 1.22471 1.02432 1.00627 0.97855 1.88051 1.73719 1.23197 1.42858 1.23733 0.96851 0.82155 0.97021 0.89439 1.24013 1.00061 0.96701 0.99616 1.21694 0.91565 0.87934 0.97283 0.86739 1.45555 1.20004 1.05412 1.65109 1.17820 0.86387 0.82121 0.78684 1.90897 1.23907 1.78998 1.44720 1.19832 0.96057 0.92908 1.06723 1.17623 0.82519 0.90694 0.94937 1.91659 1.42789 1.89640 1.84165 1.20862 0.91605 1.01596 1.00281 1.20458 0.96567 0.93195 0.98965 1.25159 1.05841 0.83822 1.03292 1.86533 1.92341 1.27076 1.28019 0.95134 0.74324 0.81085 0.90831 1.17207 0.83366 0.91827 1.02082 1.91603 1.41858 1.90362 1.85813 1.21088 0.91540 1.00377 0.97464 1.23629 1.02526 0.94535 0.97275 0.91518 0.91298 0.92412 0.91683 0.91053 0.91697 0.92442 0.91504 0.91579 0.87961 0.90857 0.76524 0.81858 0.85281 0.76910 1.14949 1.18087 0.83273 0.90304 0.87389 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.28 8.38 37.16 0.31 0.59 16 2 C 0.10 -0.05 1.11 -90.62 -0.10 -0.15 16 3 C -0.14 0.10 8.84 37.16 0.33 0.43 16 4 C -0.18 0.17 8.38 37.16 0.31 0.49 16 5 O -0.36 -0.31 10.00 -35.23 -0.35 -0.66 16 6 C 0.06 -0.07 2.69 -25.92 -0.07 -0.14 16 7 H 0.09 -0.21 5.54 -51.93 -0.29 -0.50 16 8 C -0.16 0.09 7.71 -25.92 -0.20 -0.11 16 9 C 0.12 -0.08 4.32 -67.12 -0.29 -0.37 16 10 H 0.11 0.11 7.46 -51.93 -0.39 -0.28 16 11 N -0.71 0.86 5.21 -54.01 -0.28 0.58 16 12 C 0.56 0.98 7.77 -12.40 -0.10 0.88 16 13 O -0.51 -3.00 14.94 5.31 0.08 -2.92 16 14 C -0.15 -0.02 5.88 -104.91 -0.62 -0.63 16 15 C 0.16 0.15 7.28 -38.97 -0.28 -0.14 16 16 F -0.10 -0.38 15.55 2.25 0.04 -0.34 16 17 C -0.12 0.16 9.20 -39.57 -0.36 -0.21 16 18 C -0.09 0.15 5.14 -104.48 -0.54 -0.39 16 19 C -0.07 0.14 2.96 36.01 0.11 0.25 16 20 O -0.53 1.00 11.63 -35.23 -0.41 0.59 16 21 Si 0.69 -1.46 30.81 -169.99 -5.24 -6.70 16 22 C 0.07 -0.11 6.65 -39.49 -0.26 -0.37 16 23 F -0.12 0.05 12.80 2.25 0.03 0.08 16 24 C -0.09 0.18 9.52 -39.11 -0.37 -0.19 16 25 C -0.14 0.25 7.66 -25.91 -0.20 0.05 16 26 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 27 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 28 H 0.06 -0.13 6.24 -51.93 -0.32 -0.45 16 29 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 30 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.06 -0.07 7.02 -51.93 -0.36 -0.43 16 33 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.10 0.01 8.14 -51.93 -0.42 -0.42 16 36 H 0.07 -0.01 8.14 -51.92 -0.42 -0.43 16 37 H 0.40 -1.60 6.73 -40.82 -0.27 -1.87 16 38 H 0.16 -0.41 7.06 -52.49 -0.37 -0.78 16 39 H 0.13 -0.21 7.96 -51.93 -0.41 -0.62 16 40 H 0.38 -2.26 8.42 45.56 0.38 -1.88 16 41 H -0.23 -0.01 5.26 56.52 0.30 0.29 16 42 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 43 H 0.15 -0.74 6.40 -52.49 -0.34 -1.08 16 44 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 45 H 0.11 -0.14 8.14 -51.93 -0.42 -0.57 16 LS Contribution 369.22 15.07 5.56 5.56 Total: 0.00 -7.63 369.22 -9.23 -16.86 By element: Atomic # 1 Polarization: -6.73 SS G_CDS: -6.33 Total: -13.06 kcal Atomic # 6 Polarization: 2.33 SS G_CDS: -2.33 Total: -0.01 kcal Atomic # 7 Polarization: 0.86 SS G_CDS: -0.28 Total: 0.58 kcal Atomic # 8 Polarization: -2.30 SS G_CDS: -0.68 Total: -2.99 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.06 Total: -0.26 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.24 Total: -6.70 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -7.63 -9.23 -16.86 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12113340_12360598.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.274 kcal (2) G-P(sol) polarization free energy of solvation -7.630 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.904 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.234 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.864 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.138 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds