Wall clock time and date at job start Tue Mar 9 2021 14:49:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52999 * 109.47228 * 2 1 4 4 C 1.53003 * 109.46636 * 239.99889 * 2 1 3 5 5 O 1.42898 * 109.47080 * 120.00322 * 2 1 3 6 6 C 1.42902 * 113.99995 * 59.99295 * 5 2 1 7 7 H 1.09000 * 112.85100 * 18.80773 * 6 5 2 8 8 C 1.53787 * 113.60963 * 150.00209 * 6 5 2 9 9 C 1.53784 * 87.07923 * 140.06730 * 8 6 5 10 10 H 1.09004 * 113.61162 * 220.01809 * 9 8 6 11 11 N 1.46499 * 113.61434 * 89.11404 * 9 8 6 12 12 C 1.34778 * 119.99940 * 155.00095 * 11 9 8 13 13 O 1.21280 * 119.99860 * 359.97438 * 12 11 9 14 14 C 1.50703 * 119.99817 * 180.02562 * 12 11 9 15 15 C 1.53001 * 109.46868 * 179.97438 * 14 12 11 16 16 O 1.42894 * 109.47405 * 179.97438 * 15 14 12 17 17 C 1.35901 * 117.00595 * 179.97438 * 16 15 14 18 18 C 1.38711 * 120.05817 * 179.97438 * 17 16 15 19 19 C 1.38166 * 119.94079 * 180.02562 * 18 17 16 20 20 C 1.50697 * 119.96692 * 180.02562 * 19 18 17 21 21 O 1.42904 * 109.47488 * 299.99869 * 20 19 18 22 22 Si 1.86300 * 109.47001 * 180.02562 * 20 19 18 23 23 C 1.38240 * 120.05883 * 0.02562 * 19 18 17 24 24 C 1.38294 * 120.10952 * 0.02562 * 23 19 18 25 25 C 1.38122 * 120.05349 * 359.67393 * 24 23 19 26 26 C 1.53779 * 87.08045 * 334.56667 * 9 8 6 27 27 H 1.09002 * 109.47170 * 300.00218 * 1 2 3 28 28 H 1.09002 * 109.47055 * 59.99934 * 1 2 3 29 29 H 1.08998 * 109.47733 * 179.97438 * 1 2 3 30 30 H 1.09005 * 109.46579 * 180.02562 * 3 2 1 31 31 H 1.09002 * 109.47156 * 300.00004 * 3 2 1 32 32 H 1.09001 * 109.47047 * 60.00337 * 3 2 1 33 33 H 1.09002 * 109.47341 * 300.00068 * 4 2 1 34 34 H 1.09002 * 109.47254 * 60.00298 * 4 2 1 35 35 H 1.09005 * 109.46690 * 180.02562 * 4 2 1 36 36 H 1.09004 * 113.61202 * 254.61483 * 8 6 5 37 37 H 1.08994 * 113.61447 * 25.51914 * 8 6 5 38 38 H 0.97000 * 120.00274 * 334.99936 * 11 9 8 39 39 H 1.08994 * 109.47235 * 299.99749 * 14 12 11 40 40 H 1.08990 * 109.47141 * 60.00062 * 14 12 11 41 41 H 1.09004 * 109.47076 * 299.99756 * 15 14 12 42 42 H 1.09001 * 109.47443 * 59.99842 * 15 14 12 43 43 H 1.07994 * 120.02822 * 359.97438 * 18 17 16 44 44 H 1.09002 * 109.47698 * 60.00353 * 20 19 18 45 45 H 0.96697 * 114.00187 * 180.02562 * 21 20 19 46 46 H 1.48503 * 109.99833 * 298.68043 * 22 20 19 47 47 H 1.48498 * 110.00412 * 59.99980 * 22 20 19 48 48 H 1.08000 * 119.94501 * 179.97438 * 23 19 18 49 49 H 1.07999 * 119.96757 * 179.97438 * 24 23 19 50 50 H 1.08002 * 120.02131 * 180.32730 * 25 24 23 51 51 H 1.09006 * 113.61307 * 270.88660 * 26 9 8 52 52 H 1.08999 * 113.69146 * 139.99146 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7213 -1.2493 5 8 2.0063 -0.6737 1.1667 6 6 1.5845 -2.0355 1.2644 7 1 1.2521 -2.4452 0.3106 8 6 2.5836 -2.9379 2.0078 9 6 1.3665 -3.6135 2.6614 10 1 1.5114 -3.8482 3.7160 11 7 0.8395 -4.7438 1.8927 12 6 0.1504 -5.7199 2.5162 13 8 -0.0331 -5.6627 3.7137 14 6 -0.3912 -6.8830 1.7255 15 6 -1.1263 -7.8405 2.6656 16 8 -1.6404 -8.9430 1.9159 17 6 -2.3250 -9.8928 2.6059 18 6 -2.8520 -10.9902 1.9409 19 6 -3.5480 -11.9541 2.6447 20 6 -4.1203 -13.1468 1.9230 21 8 -5.0500 -12.7033 0.9325 22 14 -4.9936 -14.2508 3.1433 23 6 -3.7199 -11.8253 4.0103 24 6 -3.1964 -10.7317 4.6754 25 6 -2.4945 -9.7685 3.9773 26 6 0.6068 -2.2981 2.4219 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 3.1301 1.4424 -0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6768 1.9563 0.8900 33 1 1.6765 -1.7490 -1.2493 34 1 1.6766 -0.2075 -2.1393 35 1 3.1300 -0.7217 -1.2491 36 1 3.1486 -3.5984 1.3500 37 1 3.2160 -2.4001 2.7140 38 1 0.9866 -4.7897 0.9351 39 1 -1.0823 -6.5161 0.9668 40 1 0.4323 -7.4091 1.2429 41 1 -0.4348 -8.2074 3.4241 42 1 -1.9499 -7.3146 3.1486 43 1 -2.7190 -11.0906 0.8739 44 1 -3.3146 -13.7018 1.4424 45 1 -5.4588 -13.4198 0.4279 46 1 -4.0311 -14.7444 4.1609 47 1 -6.0946 -13.5057 3.8050 48 1 -4.2647 -12.5797 4.5586 49 1 -3.3324 -10.6332 5.7423 50 1 -2.0813 -8.9173 4.4981 51 1 0.6988 -1.5852 3.2415 52 1 -0.4244 -2.4405 2.0986 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12113340_4549614.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:49:22 Heat of formation + Delta-G solvation = -100.708433 kcal Electronic energy + Delta-G solvation = -30145.125534 eV Core-core repulsion = 25884.588817 eV Total energy + Delta-G solvation = -4260.536717 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.197 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -41.62777 -41.19672 -40.26649 -39.04337 -38.31711 -37.29265 -34.70861 -33.67835 -32.91358 -32.54792 -30.79712 -28.56432 -28.47099 -27.07313 -26.75921 -26.09362 -24.67349 -23.64339 -22.14572 -21.54908 -21.23946 -20.45711 -19.16445 -18.40762 -18.14912 -17.70174 -17.49791 -17.28442 -17.19014 -16.78161 -16.67921 -16.10619 -15.87128 -15.79038 -15.40733 -15.04265 -14.74262 -14.56108 -14.50083 -14.45085 -14.26750 -14.07923 -13.99845 -13.56151 -13.48530 -13.36114 -13.21868 -13.00901 -12.95708 -12.91465 -12.78281 -12.73861 -12.61124 -12.28606 -12.04634 -11.83546 -11.81740 -11.70756 -11.69857 -11.35040 -11.04799 -10.46266 -10.39829 -10.19283 -9.83156 -9.21402 -4.96148 0.24627 0.43298 1.27122 1.45472 1.63053 1.65522 1.99438 2.40092 2.64183 2.67956 3.35520 3.38035 3.44246 3.47391 3.70329 3.75754 3.78217 3.80481 3.81634 3.86598 3.88844 3.90975 4.00325 4.03000 4.24198 4.24473 4.26865 4.28939 4.46497 4.47199 4.55100 4.56276 4.59046 4.66232 4.68507 4.70361 4.70640 4.73802 4.78070 4.81995 4.86254 4.90229 4.98095 5.00701 5.06142 5.22191 5.26224 5.27875 5.39730 5.41502 5.47681 5.69310 6.26705 6.32471 6.39475 6.61735 7.03539 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.104 3.896 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.360 6.360 6 C 0.061 3.939 7 H 0.089 0.911 8 C -0.142 4.142 9 C 0.119 3.881 10 H 0.112 0.888 11 N -0.713 5.713 12 C 0.524 3.476 13 O -0.534 6.534 14 C -0.141 4.141 15 C 0.074 3.926 16 O -0.315 6.315 17 C 0.134 3.866 18 C -0.121 4.121 19 C -0.038 4.038 20 C -0.073 4.073 21 O -0.545 6.545 22 Si 0.687 3.313 23 C -0.162 4.162 24 C -0.071 4.071 25 C -0.203 4.203 26 C -0.165 4.165 27 H 0.065 0.935 28 H 0.066 0.934 29 H 0.057 0.943 30 H 0.064 0.936 31 H 0.071 0.929 32 H 0.064 0.936 33 H 0.057 0.943 34 H 0.068 0.932 35 H 0.065 0.935 36 H 0.078 0.922 37 H 0.106 0.894 38 H 0.403 0.597 39 H 0.108 0.892 40 H 0.108 0.892 41 H 0.073 0.927 42 H 0.073 0.927 43 H 0.136 0.864 44 H 0.077 0.923 45 H 0.383 0.617 46 H -0.255 1.255 47 H -0.250 1.250 48 H 0.119 0.881 49 H 0.130 0.870 50 H 0.134 0.866 51 H 0.100 0.900 52 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.665 -1.417 -4.979 5.219 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C 0.065 3.935 3 C -0.196 4.196 4 C -0.236 4.236 5 O -0.279 6.279 6 C 0.003 3.997 7 H 0.107 0.893 8 C -0.180 4.180 9 C 0.014 3.986 10 H 0.130 0.870 11 N -0.364 5.364 12 C 0.310 3.690 13 O -0.410 6.410 14 C -0.181 4.181 15 C -0.002 4.002 16 O -0.229 6.229 17 C 0.089 3.911 18 C -0.140 4.140 19 C -0.038 4.038 20 C -0.183 4.183 21 O -0.351 6.351 22 Si 0.588 3.412 23 C -0.180 4.180 24 C -0.089 4.089 25 C -0.221 4.221 26 C -0.204 4.204 27 H 0.084 0.916 28 H 0.085 0.915 29 H 0.076 0.924 30 H 0.083 0.917 31 H 0.090 0.910 32 H 0.083 0.917 33 H 0.076 0.924 34 H 0.087 0.913 35 H 0.084 0.916 36 H 0.097 0.903 37 H 0.124 0.876 38 H 0.237 0.763 39 H 0.126 0.874 40 H 0.127 0.873 41 H 0.092 0.908 42 H 0.091 0.909 43 H 0.154 0.846 44 H 0.095 0.905 45 H 0.230 0.770 46 H -0.180 1.180 47 H -0.175 1.175 48 H 0.137 0.863 49 H 0.148 0.852 50 H 0.152 0.848 51 H 0.119 0.881 52 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 0.651 -0.804 -3.096 3.264 hybrid contribution 0.327 0.452 -0.608 0.825 sum 0.978 -0.352 -3.705 3.848 Atomic orbital electron populations 1.22468 0.95457 1.02423 1.02996 1.21551 0.93231 0.93349 0.85328 1.21772 1.02038 0.93154 1.02677 1.22470 1.02356 1.00718 0.98045 1.88048 1.73728 1.23170 1.42936 1.23727 0.95492 0.83090 0.97383 0.89340 1.23622 0.96723 0.97368 1.00313 1.21668 0.94453 0.85011 0.97498 0.87040 1.45651 1.56294 1.22761 1.11740 1.20302 0.77675 0.82971 0.88029 1.90760 1.57400 1.77958 1.14916 1.21466 1.02483 0.94607 0.99560 1.22422 0.98385 0.85777 0.93598 1.85967 1.67755 1.32035 1.37133 1.18925 0.92592 0.89150 0.90418 1.20205 1.00482 0.92648 1.00664 1.19116 0.96713 0.95115 0.92853 1.24721 0.96220 0.99013 0.98384 1.86498 1.59476 1.37119 1.51994 0.95408 0.81711 0.84343 0.79710 1.20781 1.03769 0.99481 0.93985 1.20874 0.95320 0.92692 1.00040 1.21375 1.05116 1.02278 0.93352 1.24001 0.99262 0.97108 1.00031 0.91623 0.91494 0.92432 0.91718 0.91039 0.91704 0.92378 0.91295 0.91554 0.90347 0.87568 0.76283 0.87380 0.87332 0.90847 0.90880 0.84622 0.90515 0.76950 1.17969 1.17507 0.86326 0.85161 0.84785 0.88143 0.90918 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.16 8.38 37.16 0.31 0.47 16 2 C 0.10 -0.04 1.11 -90.62 -0.10 -0.14 16 3 C -0.14 0.09 8.84 37.16 0.33 0.42 16 4 C -0.18 0.25 8.38 37.16 0.31 0.57 16 5 O -0.36 -0.37 10.00 -35.23 -0.35 -0.72 16 6 C 0.06 -0.06 2.69 -25.92 -0.07 -0.13 16 7 H 0.09 -0.20 5.54 -51.93 -0.29 -0.48 16 8 C -0.14 0.21 7.66 -25.91 -0.20 0.01 16 9 C 0.12 -0.07 4.32 -67.12 -0.29 -0.36 16 10 H 0.11 0.12 7.47 -51.93 -0.39 -0.27 16 11 N -0.71 1.19 5.26 -53.01 -0.28 0.91 16 12 C 0.52 0.26 7.83 -10.98 -0.09 0.18 16 13 O -0.53 -2.46 15.58 5.56 0.09 -2.37 16 14 C -0.14 0.21 6.07 -27.88 -0.17 0.04 16 15 C 0.07 0.07 4.03 37.16 0.15 0.22 16 16 O -0.32 -0.84 10.14 -19.43 -0.20 -1.04 16 17 C 0.13 0.48 6.69 -39.22 -0.26 0.22 16 18 C -0.12 -0.44 9.55 -39.43 -0.38 -0.82 16 19 C -0.04 -0.13 5.42 -104.65 -0.57 -0.69 16 20 C -0.07 -0.04 2.81 36.00 0.10 0.06 16 21 O -0.54 -0.40 12.74 -35.23 -0.45 -0.85 16 22 Si 0.69 -0.40 29.78 -169.99 -5.06 -5.47 16 23 C -0.16 -0.54 8.67 -39.56 -0.34 -0.89 16 24 C -0.07 -0.19 10.04 -39.60 -0.40 -0.59 16 25 C -0.20 -0.58 9.04 -39.44 -0.36 -0.94 16 26 C -0.17 0.07 7.71 -25.92 -0.20 -0.13 16 27 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 28 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 29 H 0.06 -0.07 7.02 -51.93 -0.36 -0.43 16 30 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.06 -0.12 6.24 -51.93 -0.32 -0.44 16 34 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 35 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 37 H 0.11 -0.10 8.14 -51.93 -0.42 -0.53 16 38 H 0.40 -1.75 8.70 -40.82 -0.36 -2.10 16 39 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 40 H 0.11 -0.33 8.14 -51.93 -0.42 -0.76 16 41 H 0.07 0.09 7.61 -51.93 -0.40 -0.31 16 42 H 0.07 0.10 7.63 -51.93 -0.40 -0.29 16 43 H 0.14 0.39 8.06 -52.49 -0.42 -0.04 16 44 H 0.08 -0.09 7.96 -51.93 -0.41 -0.50 16 45 H 0.38 -1.72 8.74 45.56 0.40 -1.33 16 46 H -0.25 -0.46 7.11 56.52 0.40 -0.05 16 47 H -0.25 -0.68 7.11 56.52 0.40 -0.28 16 48 H 0.12 0.31 4.87 -52.49 -0.26 0.05 16 49 H 0.13 0.06 8.06 -52.49 -0.42 -0.36 16 50 H 0.13 0.21 6.30 -52.49 -0.33 -0.13 16 51 H 0.10 0.02 8.14 -51.93 -0.42 -0.40 16 52 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 LS Contribution 417.03 15.07 6.28 6.28 Total: 0.00 -8.78 417.03 -10.84 -19.62 By element: Atomic # 1 Polarization: -5.21 SS G_CDS: -8.65 Total: -13.86 kcal Atomic # 6 Polarization: -0.29 SS G_CDS: -2.22 Total: -2.50 kcal Atomic # 7 Polarization: 1.19 SS G_CDS: -0.28 Total: 0.91 kcal Atomic # 8 Polarization: -4.07 SS G_CDS: -0.91 Total: -4.99 kcal Atomic # 14 Polarization: -0.40 SS G_CDS: -5.06 Total: -5.47 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -8.78 -10.84 -19.62 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12113340_4549614.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.091 kcal (2) G-P(sol) polarization free energy of solvation -8.782 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.872 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.836 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.618 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.708 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds