Wall clock time and date at job start Tue Mar 9 2021 14:49:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 C 1.53001 * 109.46982 * 2 1 4 4 C 1.52998 * 109.46997 * 240.00117 * 2 1 3 5 5 O 1.42898 * 109.47156 * 120.00088 * 2 1 3 6 6 C 1.42894 * 113.99889 * 59.99681 * 5 2 1 7 7 H 1.09000 * 112.91103 * 18.75171 * 6 5 2 8 8 C 1.53786 * 113.61403 * 150.00166 * 6 5 2 9 9 C 1.53781 * 87.17350 * 89.15805 * 8 6 5 10 10 H 1.08997 * 113.61223 * 270.84552 * 9 8 6 11 11 N 1.46499 * 113.61225 * 139.93836 * 9 8 6 12 12 C 1.34783 * 119.99531 * 155.00207 * 11 9 8 13 13 O 1.21278 * 120.00062 * 359.97438 * 12 11 9 14 14 C 1.50703 * 119.99755 * 180.02562 * 12 11 9 15 15 O 1.42895 * 109.47034 * 179.97438 * 14 12 11 16 16 C 1.35901 * 116.99884 * 180.02562 * 15 14 12 17 17 C 1.38715 * 120.05615 * 179.97438 * 16 15 14 18 18 N 1.48010 * 120.02482 * 359.95589 * 17 16 15 19 19 O 1.21799 * 119.99615 * 179.97438 * 18 17 16 20 20 O 1.21792 * 120.00189 * 0.02562 * 18 17 16 21 21 C 1.38166 * 119.94555 * 179.97438 * 17 16 15 22 22 C 1.38234 * 120.05299 * 0.02562 * 21 17 16 23 23 C 1.50710 * 119.94289 * 179.97438 * 22 21 17 24 24 O 1.42893 * 109.46987 * 300.00306 * 23 22 21 25 25 Si 1.86299 * 109.47017 * 179.97438 * 23 22 21 26 26 C 1.38294 * 120.11673 * 359.97438 * 22 21 17 27 27 C 1.38122 * 120.05051 * 359.74249 * 26 22 21 28 28 C 1.53782 * 87.08260 * 25.39213 * 9 8 6 29 29 H 1.08994 * 109.46694 * 300.00446 * 1 2 3 30 30 H 1.09004 * 109.46849 * 59.99907 * 1 2 3 31 31 H 1.08994 * 109.47153 * 179.97438 * 1 2 3 32 32 H 1.09002 * 109.46806 * 180.02562 * 3 2 1 33 33 H 1.09001 * 109.47046 * 299.99381 * 3 2 1 34 34 H 1.08996 * 109.47381 * 59.99852 * 3 2 1 35 35 H 1.09008 * 109.47226 * 300.00130 * 4 2 1 36 36 H 1.09002 * 109.47702 * 59.99595 * 4 2 1 37 37 H 1.08992 * 109.47512 * 180.02562 * 4 2 1 38 38 H 1.09002 * 113.61357 * 334.56722 * 8 6 5 39 39 H 1.09002 * 113.61608 * 203.74884 * 8 6 5 40 40 H 0.96997 * 120.00777 * 335.00229 * 11 9 8 41 41 H 1.08994 * 109.47288 * 300.00303 * 14 12 11 42 42 H 1.09007 * 109.46858 * 60.00059 * 14 12 11 43 43 H 1.07996 * 119.97168 * 180.02562 * 21 17 16 44 44 H 1.09000 * 109.46454 * 60.00271 * 23 22 21 45 45 H 0.96700 * 114.00179 * 299.99719 * 24 23 22 46 46 H 1.48500 * 109.99567 * 180.02562 * 25 23 22 47 47 H 1.48498 * 110.00401 * 301.31952 * 25 23 22 48 48 H 1.07994 * 119.97343 * 180.02562 * 26 22 21 49 49 H 1.08003 * 120.02633 * 180.27652 * 27 26 22 50 50 H 1.08997 * 113.61668 * 89.11298 * 28 9 8 51 51 H 1.08998 * 113.61674 * 219.93807 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0064 -0.6736 1.1667 6 6 1.5847 -2.0354 1.2645 7 1 1.2512 -2.4458 0.3113 8 6 2.5837 -2.9379 2.0078 9 6 1.8433 -2.5621 3.3022 10 1 2.2357 -1.6676 3.7857 11 7 1.6751 -3.6843 4.2289 12 6 1.5252 -3.4521 5.5481 13 8 1.5300 -2.3143 5.9679 14 6 1.3528 -4.6064 6.5015 15 8 1.2148 -4.1075 7.8334 16 6 1.0502 -5.0253 8.8220 17 6 0.9106 -4.6110 10.1385 18 7 0.9417 -3.1684 10.4681 19 8 0.8186 -2.8052 11.6242 20 8 1.0895 -2.3446 9.5834 21 6 0.7428 -5.5461 11.1417 22 6 0.7145 -6.8936 10.8345 23 6 0.5320 -7.9114 11.9308 24 8 1.6000 -7.7936 12.8728 25 14 0.5371 -9.6233 11.1959 26 6 0.8535 -7.3093 9.5228 27 6 1.0156 -6.3781 8.5156 28 6 0.6080 -2.2968 2.4255 29 1 -0.3632 0.5139 0.8899 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0276 -0.0005 32 1 3.1301 1.4425 -0.0005 33 1 1.6768 1.9563 -0.8900 34 1 1.6767 1.9564 0.8899 35 1 1.6767 -1.7489 -1.2493 36 1 1.6767 -0.2075 -2.1393 37 1 3.1300 -0.7217 -1.2491 38 1 3.6109 -2.5749 1.9713 39 1 2.4979 -3.9925 1.7461 40 1 1.6717 -4.5943 3.8932 41 1 0.4610 -5.1713 6.2305 42 1 2.2257 -5.2568 6.4461 43 1 0.6337 -5.2240 12.1667 44 1 -0.4183 -7.7357 12.4350 45 1 2.4774 -7.9380 12.4927 46 1 0.3572 -10.6362 12.2669 47 1 -0.5496 -9.7483 10.1916 48 1 0.8307 -8.3625 9.2854 49 1 1.1196 -6.7030 7.4909 50 1 -0.0192 -3.1759 2.2772 51 1 0.0393 -1.4172 2.7270 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12113340_4549638.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:49:49 Heat of formation + Delta-G solvation = -84.793469 kcal Electronic energy + Delta-G solvation = -35023.815945 eV Core-core repulsion = 30088.490536 eV Total energy + Delta-G solvation = -4935.325409 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.176 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -43.00838 -41.79659 -41.31189 -40.37056 -39.44992 -38.14019 -37.51075 -37.10505 -34.81643 -33.55930 -33.31892 -32.37012 -30.08843 -28.50548 -28.44454 -27.58779 -26.77187 -26.75477 -25.40392 -23.95566 -22.80372 -21.88072 -21.71196 -20.46734 -20.28032 -19.43425 -19.20687 -18.46001 -18.32832 -18.23070 -17.99760 -17.65019 -17.21476 -16.89854 -16.57276 -16.46135 -16.29851 -15.99636 -15.73923 -15.59782 -15.25487 -14.93254 -14.91070 -14.44463 -14.28259 -14.10529 -14.00954 -13.88969 -13.61032 -13.49557 -13.29451 -13.15357 -12.97004 -12.81776 -12.71936 -12.63154 -12.51101 -12.41287 -12.18285 -12.12204 -11.99210 -11.83401 -11.77126 -11.71746 -11.18594 -10.93109 -10.91144 -10.76844 -10.49951 -10.13692 -9.89913 -5.31023 -1.12411 -0.37724 0.39081 0.54585 1.00718 1.10884 1.35492 1.42966 1.74921 1.93938 2.23837 2.47626 2.98764 3.02919 3.20493 3.25137 3.34916 3.44553 3.48479 3.54663 3.57351 3.62014 3.71417 3.75541 3.82567 3.90030 3.94750 4.04657 4.14448 4.15724 4.17338 4.30592 4.43158 4.48532 4.50965 4.58551 4.67762 4.69260 4.72068 4.74679 4.81652 4.86486 4.87938 4.92826 4.98095 5.04242 5.11337 5.25462 5.30263 5.36151 5.47159 5.71952 6.28876 6.30836 6.32712 6.95288 7.06521 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.106 3.894 3 C -0.140 4.140 4 C -0.179 4.179 5 O -0.352 6.352 6 C 0.066 3.934 7 H 0.085 0.915 8 C -0.147 4.147 9 C 0.133 3.867 10 H 0.123 0.877 11 N -0.719 5.719 12 C 0.513 3.487 13 O -0.494 6.494 14 C 0.030 3.970 15 O -0.253 6.253 16 C 0.200 3.800 17 C -0.076 4.076 18 N 0.028 4.972 19 O -0.177 6.177 20 O -0.117 6.117 21 C 0.009 3.991 22 C -0.158 4.158 23 C -0.066 4.066 24 O -0.536 6.536 25 Si 0.693 3.307 26 C -0.025 4.025 27 C -0.209 4.209 28 C -0.172 4.172 29 H 0.065 0.935 30 H 0.066 0.934 31 H 0.058 0.942 32 H 0.064 0.936 33 H 0.072 0.928 34 H 0.065 0.935 35 H 0.059 0.941 36 H 0.068 0.932 37 H 0.065 0.935 38 H 0.086 0.914 39 H 0.096 0.904 40 H 0.401 0.599 41 H 0.101 0.899 42 H 0.102 0.898 43 H 0.164 0.836 44 H 0.121 0.879 45 H 0.381 0.619 46 H -0.248 1.248 47 H -0.254 1.254 48 H 0.149 0.851 49 H 0.156 0.844 50 H 0.091 0.909 51 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.279 -9.882 -8.528 13.115 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.068 3.932 3 C -0.197 4.197 4 C -0.236 4.236 5 O -0.271 6.271 6 C 0.007 3.993 7 H 0.103 0.897 8 C -0.186 4.186 9 C 0.029 3.971 10 H 0.141 0.859 11 N -0.373 5.373 12 C 0.297 3.703 13 O -0.366 6.366 14 C -0.048 4.048 15 O -0.162 6.162 16 C 0.150 3.850 17 C -0.160 4.160 18 N 0.548 4.452 19 O -0.386 6.386 20 O -0.341 6.341 21 C -0.010 4.010 22 C -0.160 4.160 23 C -0.176 4.176 24 O -0.341 6.341 25 Si 0.594 3.406 26 C -0.043 4.043 27 C -0.228 4.228 28 C -0.211 4.211 29 H 0.084 0.916 30 H 0.086 0.914 31 H 0.077 0.923 32 H 0.083 0.917 33 H 0.091 0.909 34 H 0.084 0.916 35 H 0.078 0.922 36 H 0.087 0.913 37 H 0.084 0.916 38 H 0.104 0.896 39 H 0.115 0.885 40 H 0.235 0.765 41 H 0.119 0.881 42 H 0.120 0.880 43 H 0.182 0.818 44 H 0.138 0.862 45 H 0.229 0.771 46 H -0.173 1.173 47 H -0.179 1.179 48 H 0.166 0.834 49 H 0.174 0.826 50 H 0.109 0.891 51 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 0.443 -10.027 -7.860 12.748 hybrid contribution -0.581 0.034 -0.262 0.638 sum -0.138 -9.993 -8.122 12.878 Atomic orbital electron populations 1.22477 0.95363 1.02543 1.03068 1.21584 0.93321 0.93284 0.85057 1.21776 1.02094 0.93032 1.02785 1.22470 1.02357 1.00844 0.97953 1.87998 1.73418 1.22458 1.43246 1.22762 0.95378 0.83641 0.97486 0.89750 1.23628 1.00500 0.99829 0.94593 1.22567 0.96617 0.90494 0.87420 0.85917 1.45825 1.75005 1.10408 1.06022 1.19853 0.77681 0.89984 0.82820 1.90872 1.46419 1.22521 1.76741 1.22758 1.04239 0.96767 0.81069 1.86511 1.84580 1.31024 1.14107 1.18704 0.90473 0.89132 0.86673 1.20594 1.20394 0.82297 0.92717 1.43341 0.98346 1.02658 1.00839 1.94556 1.54470 1.84533 1.05011 1.94702 1.50485 1.47504 1.41429 1.20830 0.89694 0.90845 0.99593 1.20315 1.06081 0.94089 0.95477 1.25099 0.93917 1.06309 0.92289 1.86560 1.17260 1.94509 1.35761 0.94902 0.88983 0.75303 0.81458 1.21264 0.91309 1.00169 0.91553 1.21268 1.09663 0.90009 1.01908 1.24058 0.97598 1.02911 0.96520 0.91567 0.91449 0.92266 0.91671 0.90948 0.91589 0.92196 0.91286 0.91555 0.89559 0.88542 0.76483 0.88131 0.87981 0.81814 0.86171 0.77125 1.17284 1.17940 0.83417 0.82604 0.89098 0.90044 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.16 8.38 37.16 0.31 0.47 16 2 C 0.11 -0.03 1.11 -90.62 -0.10 -0.13 16 3 C -0.14 0.05 8.84 37.16 0.33 0.38 16 4 C -0.18 0.26 8.38 37.16 0.31 0.57 16 5 O -0.35 -0.40 9.92 -35.23 -0.35 -0.75 16 6 C 0.07 -0.08 2.89 -25.82 -0.07 -0.16 16 7 H 0.08 -0.20 5.55 -51.93 -0.29 -0.49 16 8 C -0.15 0.35 7.66 -25.92 -0.20 0.15 16 9 C 0.13 -0.07 4.18 -67.12 -0.28 -0.36 16 10 H 0.12 0.32 7.47 -51.93 -0.39 -0.06 16 11 N -0.72 1.65 5.35 -53.02 -0.28 1.37 16 12 C 0.51 0.46 7.91 -10.98 -0.09 0.37 16 13 O -0.49 -3.35 16.10 -14.35 -0.23 -3.58 16 14 C 0.03 -0.07 5.22 36.01 0.19 0.11 16 15 O -0.25 -0.59 7.68 -49.78 -0.38 -0.98 16 16 C 0.20 0.15 6.67 -39.22 -0.26 -0.11 16 17 C -0.08 -0.22 6.87 -79.80 -0.55 -0.77 16 18 N 0.03 0.19 4.45 34.03 0.15 0.34 16 19 O -0.18 -1.33 18.45 -29.46 -0.54 -1.87 16 20 O -0.12 -1.04 17.24 -36.49 -0.63 -1.67 16 21 C 0.01 0.01 9.11 -39.61 -0.36 -0.36 16 22 C -0.16 0.33 5.39 -104.60 -0.56 -0.24 16 23 C -0.07 0.17 2.82 36.01 0.10 0.27 16 24 O -0.54 0.85 12.77 -35.23 -0.45 0.40 16 25 Si 0.69 -2.64 29.79 -169.99 -5.06 -7.71 16 26 C -0.03 0.10 8.66 -39.60 -0.34 -0.24 16 27 C -0.21 0.70 9.04 -39.44 -0.36 0.34 16 28 C -0.17 0.19 7.71 -25.82 -0.20 -0.01 16 29 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 30 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.06 -0.08 7.02 -51.93 -0.36 -0.44 16 32 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 34 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 35 H 0.06 -0.12 6.25 -51.92 -0.32 -0.44 16 36 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 37 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 38 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.10 -0.46 8.12 -51.93 -0.42 -0.88 16 40 H 0.40 -2.45 8.73 -40.82 -0.36 -2.81 16 41 H 0.10 -0.57 7.65 -51.93 -0.40 -0.97 16 42 H 0.10 -0.60 7.67 -51.93 -0.40 -1.00 16 43 H 0.16 0.11 7.61 -52.49 -0.40 -0.29 16 44 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 45 H 0.38 -2.13 8.70 45.56 0.40 -1.73 16 46 H -0.25 0.01 7.11 56.52 0.40 0.41 16 47 H -0.25 0.51 7.11 56.52 0.40 0.91 16 48 H 0.15 -0.98 4.87 -52.49 -0.26 -1.24 16 49 H 0.16 -1.09 6.30 -52.48 -0.33 -1.42 16 50 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 51 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 LS Contribution 422.13 15.07 6.36 6.36 Total: 0.00 -12.90 422.13 -10.92 -23.82 By element: Atomic # 1 Polarization: -8.69 SS G_CDS: -7.37 Total: -16.05 kcal Atomic # 6 Polarization: 2.44 SS G_CDS: -2.13 Total: 0.31 kcal Atomic # 7 Polarization: 1.84 SS G_CDS: -0.13 Total: 1.71 kcal Atomic # 8 Polarization: -5.86 SS G_CDS: -2.59 Total: -8.44 kcal Atomic # 14 Polarization: -2.64 SS G_CDS: -5.06 Total: -7.71 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -12.90 -10.92 -23.82 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12113340_4549638.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.970 kcal (2) G-P(sol) polarization free energy of solvation -12.905 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.874 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.919 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.824 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.793 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds