Wall clock time and date at job start Tue Mar 9 2021 12:54:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34228 * 116.99985 * 2 1 4 4 O 1.20826 * 120.00319 * 359.97438 * 3 2 1 5 5 C 1.50706 * 120.00394 * 179.97438 * 3 2 1 6 6 H 1.09007 * 112.84361 * 48.80960 * 5 3 2 7 7 C 1.53782 * 113.61744 * 179.97438 * 5 3 2 8 8 C 1.53782 * 87.07935 * 139.98512 * 7 5 3 9 9 H 1.09000 * 113.61350 * 220.02155 * 8 7 5 10 10 N 1.46495 * 113.61116 * 89.11863 * 8 7 5 11 11 C 1.34779 * 119.99917 * 155.00338 * 10 8 7 12 12 O 1.21696 * 119.99597 * 359.97438 * 11 10 8 13 13 C 1.46677 * 120.00269 * 179.97438 * 11 10 8 14 14 C 1.37871 * 126.23499 * 179.71024 * 13 11 10 15 15 C 1.50705 * 126.45565 * 359.96747 * 14 13 11 16 16 C 1.39832 * 107.08732 * 179.84960 * 14 13 11 17 17 C 1.35450 * 107.86245 * 0.41655 * 16 14 13 18 18 C 1.50702 * 125.56625 * 179.78128 * 17 16 14 19 19 O 1.42901 * 109.47699 * 119.95666 * 18 17 16 20 20 Si 1.86303 * 109.46989 * 359.95576 * 18 17 16 21 21 N 1.35533 * 108.87349 * 359.74247 * 17 16 14 22 22 C 1.53770 * 113.61615 * 277.50201 * 5 3 2 23 23 H 1.09002 * 109.47379 * 299.99940 * 1 2 3 24 24 H 1.09001 * 109.46782 * 180.02562 * 1 2 3 25 25 H 1.09004 * 109.47085 * 60.00143 * 1 2 3 26 26 H 1.08995 * 113.61390 * 254.53491 * 7 5 3 27 27 H 1.09001 * 113.60782 * 25.43381 * 7 5 3 28 28 H 0.96998 * 120.00326 * 334.99556 * 10 8 7 29 29 H 1.08991 * 109.47239 * 89.99979 * 15 14 13 30 30 H 1.08994 * 109.46816 * 210.00123 * 15 14 13 31 31 H 1.08998 * 109.46701 * 329.99663 * 15 14 13 32 32 H 1.07994 * 126.07198 * 180.14218 * 16 14 13 33 33 H 1.08997 * 109.47253 * 239.96080 * 18 17 16 34 34 H 0.96700 * 113.99804 * 179.97438 * 19 18 17 35 35 H 1.48499 * 110.00060 * 298.68421 * 20 18 17 36 36 H 1.48497 * 109.99803 * 60.00078 * 20 18 17 37 37 H 0.97001 * 125.67505 * 179.97438 * 21 17 16 38 38 H 1.09003 * 113.61809 * 334.56242 * 22 5 3 39 39 H 1.09001 * 113.61801 * 105.46465 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 1 4.0239 0.6363 -0.7551 7 6 4.1078 2.7143 -0.0001 8 6 5.1807 2.2275 0.9882 9 1 5.3954 2.9395 1.7851 10 7 6.3902 1.7183 0.3372 11 6 7.5663 1.7318 0.9953 12 8 7.6235 2.1675 2.1302 13 6 8.7773 1.2214 0.3438 14 6 10.0416 1.1793 0.8921 15 6 10.4368 1.6483 2.2687 16 6 10.8876 0.6169 -0.0688 17 6 10.1437 0.3401 -1.1664 18 6 10.6594 -0.2720 -2.4433 19 8 9.9797 -1.5048 -2.6891 20 14 12.4878 -0.5920 -2.2843 21 7 8.8596 0.7028 -0.9286 22 6 4.1906 1.1238 1.3977 23 1 -0.3634 0.5138 0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5138 -0.8900 26 1 4.5111 3.0286 -0.9627 27 1 3.4170 3.4407 0.4281 28 1 6.3447 1.3712 -0.5674 29 1 10.3383 0.8245 2.9754 30 1 11.4712 1.9915 2.2525 31 1 9.7867 2.4684 2.5736 32 1 11.9470 0.4392 0.0426 33 1 10.4811 0.4127 -3.2723 34 1 10.2616 -1.9550 -3.4972 35 1 13.2095 0.6863 -2.0602 36 1 12.7442 -1.5243 -1.1573 37 1 8.1216 0.6122 -1.5515 38 1 3.5227 1.4153 2.2083 39 1 4.6609 0.1546 1.5634 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_13940406.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:49 Heat of formation + Delta-G solvation = -78.647204 kcal Electronic energy + Delta-G solvation = -23555.226600 eV Core-core repulsion = 19852.371095 eV Total energy + Delta-G solvation = -3702.855505 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -42.64907 -41.95942 -40.59118 -39.02455 -37.81562 -37.35562 -34.70189 -33.40626 -31.78827 -29.50539 -28.19962 -27.55152 -26.99696 -26.34807 -23.16048 -22.34361 -21.60544 -20.63323 -20.29632 -19.56915 -18.74251 -18.63314 -17.88093 -17.41620 -17.08547 -16.80817 -16.40242 -15.92163 -15.67626 -15.16349 -15.04284 -14.99269 -14.82794 -14.42593 -14.22725 -13.82704 -13.76551 -13.54323 -13.52555 -13.28429 -13.16375 -13.07774 -12.89138 -12.50009 -12.02510 -11.97833 -11.88720 -11.81758 -11.36565 -11.03735 -10.63151 -10.29638 -9.85240 -9.17677 -5.08534 0.31483 1.07032 1.11259 1.46544 1.64289 1.66109 1.86702 1.94473 2.05779 2.29843 3.08792 3.12520 3.18453 3.52252 3.62819 3.68103 3.74578 3.90149 4.04081 4.08962 4.12952 4.20807 4.31408 4.33624 4.48945 4.54837 4.58626 4.64475 4.69115 4.73146 4.79716 4.83330 5.00360 5.19179 5.30684 5.34787 5.41727 5.61971 5.85431 6.18990 6.34565 6.39024 6.68974 7.07398 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.503 6.503 5 C -0.113 4.113 6 H 0.123 0.877 7 C -0.124 4.124 8 C 0.124 3.876 9 H 0.118 0.882 10 N -0.717 5.717 11 C 0.597 3.403 12 O -0.516 6.516 13 C -0.058 4.058 14 C -0.059 4.059 15 C -0.094 4.094 16 C -0.208 4.208 17 C 0.075 3.925 18 C -0.060 4.060 19 O -0.550 6.550 20 Si 0.716 3.284 21 N -0.522 5.522 22 C -0.132 4.132 23 H 0.064 0.936 24 H 0.103 0.897 25 H 0.064 0.936 26 H 0.085 0.915 27 H 0.114 0.886 28 H 0.395 0.605 29 H 0.071 0.929 30 H 0.064 0.936 31 H 0.083 0.917 32 H 0.143 0.857 33 H 0.077 0.923 34 H 0.388 0.612 35 H -0.252 1.252 36 H -0.247 1.247 37 H 0.417 0.583 38 H 0.101 0.899 39 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.440 -3.095 -6.475 7.320 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.390 6.390 5 C -0.132 4.132 6 H 0.141 0.859 7 C -0.162 4.162 8 C 0.019 3.981 9 H 0.136 0.864 10 N -0.369 5.369 11 C 0.385 3.615 12 O -0.391 6.391 13 C -0.170 4.170 14 C -0.068 4.068 15 C -0.151 4.151 16 C -0.233 4.233 17 C -0.043 4.043 18 C -0.170 4.170 19 O -0.357 6.357 20 Si 0.615 3.385 21 N -0.118 5.118 22 C -0.171 4.171 23 H 0.083 0.917 24 H 0.122 0.878 25 H 0.083 0.917 26 H 0.103 0.897 27 H 0.133 0.867 28 H 0.229 0.771 29 H 0.089 0.911 30 H 0.083 0.917 31 H 0.102 0.898 32 H 0.160 0.840 33 H 0.095 0.905 34 H 0.236 0.764 35 H -0.176 1.176 36 H -0.171 1.171 37 H 0.255 0.745 38 H 0.119 0.881 39 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 1.481 -2.244 -4.632 5.356 hybrid contribution -1.300 -0.052 -0.874 1.568 sum 0.181 -2.296 -5.506 5.969 Atomic orbital electron populations 1.23330 0.75892 1.04035 1.02743 1.86520 1.23777 1.33316 1.83776 1.23536 0.91620 0.81456 0.72142 1.90690 1.66953 1.36408 1.44987 1.22653 0.87767 1.00989 1.01836 0.85910 1.23375 0.97016 0.94847 1.00983 1.21805 0.83214 0.96426 0.96666 0.86402 1.45557 1.07689 1.65375 1.18243 1.16963 0.81290 0.77842 0.85408 1.90850 1.84953 1.46173 1.17161 1.20133 0.95794 1.13983 0.87113 1.19902 0.90320 0.99640 0.96896 1.20405 1.01586 1.02052 0.91012 1.20469 0.99608 1.09854 0.93366 1.19919 0.84339 1.03498 0.96558 1.24536 1.10003 0.87906 0.94519 1.86470 1.65963 1.34723 1.48537 0.95183 0.72872 0.82904 0.87536 1.41804 1.09236 1.47866 1.12920 1.23414 0.97819 1.01255 0.94574 0.91700 0.87835 0.91726 0.89655 0.86722 0.77101 0.91068 0.91688 0.89816 0.83959 0.90512 0.76389 1.17616 1.17149 0.74533 0.88097 0.89372 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.50 10.57 -39.25 -0.41 -0.91 16 3 C 0.47 0.76 7.48 36.01 0.27 1.02 16 4 O -0.50 -2.22 15.65 -18.75 -0.29 -2.51 16 5 C -0.11 0.16 4.13 -90.96 -0.38 -0.22 16 6 H 0.12 -0.41 8.14 -51.93 -0.42 -0.83 16 7 C -0.12 0.20 7.15 -25.92 -0.19 0.01 16 8 C 0.12 -0.10 4.32 -67.10 -0.29 -0.39 16 9 H 0.12 0.07 7.46 -51.93 -0.39 -0.32 16 10 N -0.72 0.61 5.26 -54.30 -0.29 0.32 16 11 C 0.60 1.56 7.79 -12.85 -0.10 1.46 16 12 O -0.52 -2.98 14.41 5.19 0.07 -2.90 16 13 C -0.06 -0.15 7.06 -81.98 -0.58 -0.72 16 14 C -0.06 -0.21 6.21 -104.16 -0.65 -0.86 16 15 C -0.09 -0.27 9.83 36.01 0.35 0.09 16 16 C -0.21 -0.58 9.27 -39.98 -0.37 -0.96 16 17 C 0.08 0.10 6.51 -81.95 -0.53 -0.43 16 18 C -0.06 0.10 3.07 36.01 0.11 0.22 16 19 O -0.55 1.00 12.86 -35.23 -0.45 0.55 16 20 Si 0.72 -1.70 30.54 -169.99 -5.19 -6.89 16 21 N -0.52 -0.16 5.99 -5.70 -0.03 -0.20 16 22 C -0.13 0.15 7.43 -25.90 -0.19 -0.05 16 23 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 24 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 25 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 26 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 27 H 0.11 -0.06 7.43 -51.93 -0.39 -0.44 16 28 H 0.40 -1.38 7.83 -40.82 -0.32 -1.70 16 29 H 0.07 0.19 8.14 -51.93 -0.42 -0.24 16 30 H 0.06 0.10 8.14 -51.93 -0.42 -0.33 16 31 H 0.08 0.33 6.49 -51.93 -0.34 -0.01 16 32 H 0.14 0.28 6.17 -52.49 -0.32 -0.04 16 33 H 0.08 -0.29 7.96 -51.93 -0.41 -0.70 16 34 H 0.39 -2.63 8.74 45.56 0.40 -2.23 16 35 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 36 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 37 H 0.42 -1.11 8.19 -40.82 -0.33 -1.44 16 38 H 0.10 -0.10 8.09 -51.93 -0.42 -0.52 16 39 H 0.09 -0.08 8.14 -51.93 -0.42 -0.50 16 LS Contribution 333.78 15.07 5.03 5.03 Total: 0.00 -10.29 333.78 -8.14 -18.43 By element: Atomic # 1 Polarization: -6.03 SS G_CDS: -5.10 Total: -11.14 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: -1.47 Total: 0.22 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -0.32 Total: 0.12 kcal Atomic # 8 Polarization: -4.69 SS G_CDS: -1.09 Total: -5.78 kcal Atomic # 14 Polarization: -1.70 SS G_CDS: -5.19 Total: -6.89 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -10.29 -8.14 -18.43 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_13940406.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.217 kcal (2) G-P(sol) polarization free energy of solvation -10.287 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.504 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.143 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.430 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.647 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds