Wall clock time and date at job start Tue Mar 9 2021 12:55:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45194 * 1 3 3 C 1.34233 * 117.00152 * 2 1 4 4 O 1.20828 * 119.99301 * 0.02562 * 3 2 1 5 5 C 1.50697 * 119.99996 * 180.02562 * 3 2 1 6 6 H 1.09001 * 112.84576 * 48.81028 * 5 3 2 7 7 C 1.53786 * 113.61012 * 180.02562 * 5 3 2 8 8 C 1.53781 * 87.07570 * 140.06793 * 7 5 3 9 9 H 1.09004 * 113.60931 * 219.93340 * 8 7 5 10 10 N 1.46501 * 113.61951 * 89.11816 * 8 7 5 11 11 C 1.34769 * 120.00192 * 154.99326 * 10 8 7 12 12 O 1.21276 * 120.00326 * 0.02562 * 11 10 8 13 13 C 1.50705 * 119.99544 * 179.97438 * 11 10 8 14 14 C 1.53004 * 109.46881 * 180.02562 * 13 11 10 15 15 O 1.42902 * 109.47331 * 180.02562 * 14 13 11 16 16 C 1.35900 * 116.99943 * 180.02562 * 15 14 13 17 17 C 1.38707 * 120.05163 * 180.02562 * 16 15 14 18 18 C 1.38166 * 119.94172 * 179.97438 * 17 16 15 19 19 C 1.50701 * 119.97212 * 180.02562 * 18 17 16 20 20 O 1.42892 * 109.47330 * 64.99802 * 19 18 17 21 21 Si 1.86306 * 109.47278 * 185.00247 * 19 18 17 22 22 C 1.38244 * 120.05849 * 359.72378 * 18 17 16 23 23 C 1.38288 * 120.10735 * 0.54781 * 22 18 17 24 24 C 1.38126 * 120.05387 * 359.44975 * 23 22 18 25 25 C 1.53772 * 87.08487 * 334.56528 * 8 7 5 26 26 H 1.09008 * 109.47126 * 299.99573 * 1 2 3 27 27 H 1.08998 * 109.47896 * 59.99326 * 1 2 3 28 28 H 1.09007 * 109.47193 * 180.02562 * 1 2 3 29 29 H 1.08994 * 113.61562 * 25.51529 * 7 5 3 30 30 H 1.09001 * 113.68468 * 254.62419 * 7 5 3 31 31 H 0.97009 * 119.99102 * 334.99859 * 10 8 7 32 32 H 1.08997 * 109.47379 * 60.00691 * 13 11 10 33 33 H 1.08992 * 109.47380 * 299.99898 * 13 11 10 34 34 H 1.09002 * 109.47424 * 59.99986 * 14 13 11 35 35 H 1.08998 * 109.47079 * 300.00375 * 14 13 11 36 36 H 1.08007 * 120.02994 * 359.94447 * 17 16 15 37 37 H 1.09007 * 109.47193 * 304.99864 * 19 18 17 38 38 H 0.96701 * 114.00473 * 180.02562 * 20 19 18 39 39 H 1.48500 * 109.99935 * 178.68355 * 21 19 18 40 40 H 1.48495 * 109.99306 * 299.99862 * 21 19 18 41 41 H 1.07993 * 119.94966 * 180.29953 * 22 18 17 42 42 H 1.08002 * 119.97455 * 179.73146 * 23 22 18 43 43 H 1.08000 * 120.02655 * 180.29782 * 24 23 22 44 44 H 1.09004 * 113.61852 * 139.98303 * 25 8 7 45 45 H 1.08997 * 113.61667 * 270.88946 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0232 0.6365 -0.7568 7 6 4.1077 2.7143 0.0001 8 6 5.1827 2.2256 0.9852 9 1 5.4003 2.9368 1.7821 10 7 6.3910 1.7175 0.3308 11 6 7.5684 1.7300 0.9864 12 8 7.6278 2.1614 2.1182 13 6 8.8111 1.2067 0.3133 14 6 10.0000 1.3336 1.2679 15 8 11.1786 0.8379 0.6295 16 6 12.3322 0.8785 1.3467 17 6 13.5139 0.4141 0.7883 18 6 14.6856 0.4569 1.5193 19 6 15.9700 -0.0469 0.9131 20 8 16.3303 0.7801 -0.1951 21 14 17.3231 0.0053 2.1927 22 6 14.6819 0.9672 2.8041 23 6 13.5040 1.4257 3.3651 24 6 12.3300 1.3851 2.6384 25 6 4.1936 1.1219 1.3951 26 1 -0.3634 0.5138 0.8901 27 1 -0.3635 0.5139 -0.8899 28 1 -0.3634 -1.0277 0.0005 29 1 3.4180 3.4399 0.4311 30 1 4.5091 3.0315 -0.9623 31 1 6.3434 1.3721 -0.5745 32 1 9.0064 1.7852 -0.5896 33 1 8.6677 0.1589 0.0495 34 1 9.8046 0.7547 2.1706 35 1 10.1436 2.3812 1.5321 36 1 13.5181 0.0190 -0.2168 37 1 15.8326 -1.0729 0.5714 38 1 17.1491 0.5135 -0.6351 39 1 18.5875 -0.5188 1.6166 40 1 17.5202 1.3988 2.6667 41 1 15.5997 1.0043 3.3722 42 1 13.5028 1.8199 4.3706 43 1 11.4112 1.7477 3.0752 44 1 4.6643 0.1523 1.5583 45 1 3.5274 1.4123 2.2074 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_4549614.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:08 Heat of formation + Delta-G solvation = -131.908203 kcal Electronic energy + Delta-G solvation = -27417.351389 eV Core-core repulsion = 23175.166273 eV Total energy + Delta-G solvation = -4242.185116 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.08342 -41.29951 -40.85400 -39.40486 -38.88198 -37.39997 -37.34379 -34.53801 -33.20741 -32.52368 -30.78584 -29.46367 -27.34625 -27.00503 -26.84488 -25.27859 -23.57897 -22.62075 -22.08875 -21.50748 -20.50549 -19.26664 -18.82369 -18.51992 -18.06471 -17.68157 -17.46684 -17.39156 -17.30781 -17.09429 -16.81990 -16.07252 -15.82703 -15.67116 -15.45659 -15.12276 -14.69179 -14.47784 -14.43252 -14.34382 -14.09211 -13.87228 -13.74016 -13.53899 -13.42937 -13.20719 -12.99031 -12.90975 -12.85742 -12.30942 -11.99781 -11.89562 -11.88853 -11.81818 -11.78017 -11.59106 -11.36947 -11.08094 -10.51173 -10.28889 -9.82895 -9.15954 -4.94610 0.29736 0.50360 1.11098 1.27425 1.42890 1.59041 1.62123 1.67705 1.96585 2.40098 2.70973 3.08979 3.17674 3.36715 3.44855 3.52019 3.63272 3.75377 3.81687 3.88871 3.90990 3.93528 4.12987 4.13495 4.20827 4.24839 4.27873 4.32686 4.33670 4.47995 4.48053 4.54819 4.57430 4.59256 4.63194 4.66500 4.71048 4.75095 4.84834 5.05522 5.33349 5.34200 5.35020 5.46633 5.55320 5.75491 6.23336 6.43472 6.44250 6.69032 7.00375 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.503 6.503 5 C -0.113 4.113 6 H 0.125 0.875 7 C -0.125 4.125 8 C 0.121 3.879 9 H 0.115 0.885 10 N -0.713 5.713 11 C 0.525 3.475 12 O -0.533 6.533 13 C -0.141 4.141 14 C 0.074 3.926 15 O -0.316 6.316 16 C 0.132 3.868 17 C -0.124 4.124 18 C -0.036 4.036 19 C -0.077 4.077 20 O -0.535 6.535 21 Si 0.688 3.312 22 C -0.153 4.153 23 C -0.073 4.073 24 C -0.202 4.202 25 C -0.131 4.131 26 H 0.064 0.936 27 H 0.064 0.936 28 H 0.103 0.897 29 H 0.113 0.887 30 H 0.086 0.914 31 H 0.405 0.595 32 H 0.109 0.891 33 H 0.109 0.891 34 H 0.074 0.926 35 H 0.073 0.927 36 H 0.132 0.868 37 H 0.078 0.922 38 H 0.380 0.620 39 H -0.261 1.261 40 H -0.255 1.255 41 H 0.129 0.871 42 H 0.131 0.869 43 H 0.133 0.867 44 H 0.088 0.912 45 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.588 -4.523 -0.969 4.663 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.163 4.163 8 C 0.016 3.984 9 H 0.133 0.867 10 N -0.365 5.365 11 C 0.311 3.689 12 O -0.409 6.409 13 C -0.181 4.181 14 C -0.002 4.002 15 O -0.230 6.230 16 C 0.087 3.913 17 C -0.143 4.143 18 C -0.036 4.036 19 C -0.187 4.187 20 O -0.342 6.342 21 Si 0.589 3.411 22 C -0.170 4.170 23 C -0.091 4.091 24 C -0.221 4.221 25 C -0.170 4.170 26 H 0.083 0.917 27 H 0.083 0.917 28 H 0.122 0.878 29 H 0.131 0.869 30 H 0.105 0.895 31 H 0.240 0.760 32 H 0.127 0.873 33 H 0.127 0.873 34 H 0.092 0.908 35 H 0.091 0.909 36 H 0.150 0.850 37 H 0.096 0.904 38 H 0.228 0.772 39 H -0.187 1.187 40 H -0.180 1.180 41 H 0.146 0.854 42 H 0.149 0.851 43 H 0.151 0.849 44 H 0.106 0.894 45 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -0.583 -3.352 0.050 3.403 hybrid contribution -0.168 0.075 -1.590 1.600 sum -0.751 -3.278 -1.539 3.698 Atomic orbital electron populations 1.23330 0.75901 1.04037 1.02743 1.86517 1.23773 1.33343 1.83789 1.23559 0.91668 0.81445 0.72142 1.90692 1.66959 1.36435 1.44973 1.22656 0.87697 1.01028 1.01820 0.85673 1.23366 0.96969 0.94836 1.01086 1.21810 0.83546 0.96425 0.96667 0.86690 1.45643 1.07382 1.64816 1.18673 1.20322 0.84349 0.77939 0.86251 1.90764 1.85949 1.45885 1.18306 1.21468 0.91367 1.04827 1.00471 1.22413 0.82133 1.00287 0.95336 1.85966 1.15111 1.79587 1.42370 1.18906 0.85911 0.96020 0.90500 1.20210 0.89385 1.03856 1.00833 1.18998 0.92918 0.98062 0.93648 1.24839 1.01626 0.95962 0.96255 1.86600 1.45994 1.56391 1.45235 0.94919 0.76887 0.84853 0.84461 1.20916 0.98673 1.02062 0.95388 1.20906 0.91466 0.97056 0.99675 1.21384 1.00163 1.05922 0.94581 1.23394 0.97818 1.01170 0.94649 0.91723 0.91719 0.87828 0.86884 0.89497 0.76036 0.87321 0.87296 0.90819 0.90909 0.84999 0.90410 0.77209 1.18678 1.17967 0.85401 0.85067 0.84925 0.89379 0.88249 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.55 101.05 1.07 1.04 16 2 O -0.36 -0.33 10.57 -39.27 -0.41 -0.74 16 3 C 0.47 0.52 7.49 36.00 0.27 0.79 16 4 O -0.50 -2.03 15.65 -18.75 -0.29 -2.32 16 5 C -0.11 0.24 4.13 -90.96 -0.38 -0.13 16 6 H 0.13 -0.53 8.14 -51.93 -0.42 -0.95 16 7 C -0.12 0.29 7.15 -25.92 -0.19 0.11 16 8 C 0.12 -0.24 4.32 -67.12 -0.29 -0.53 16 9 H 0.12 -0.04 7.46 -51.93 -0.39 -0.42 16 10 N -0.71 2.09 5.26 -53.02 -0.28 1.81 16 11 C 0.52 -0.31 7.83 -10.99 -0.09 -0.39 16 12 O -0.53 -1.87 15.58 5.56 0.09 -1.78 16 13 C -0.14 0.34 6.07 -27.88 -0.17 0.17 16 14 C 0.07 0.01 4.03 37.16 0.15 0.15 16 15 O -0.32 -0.61 10.14 -19.42 -0.20 -0.81 16 16 C 0.13 0.35 6.69 -39.22 -0.26 0.09 16 17 C -0.12 -0.34 9.62 -39.43 -0.38 -0.72 16 18 C -0.04 -0.07 5.38 -104.65 -0.56 -0.64 16 19 C -0.08 -0.03 2.79 36.01 0.10 0.07 16 20 O -0.53 -0.90 12.81 -35.23 -0.45 -1.35 16 21 Si 0.69 -0.42 29.86 -169.99 -5.08 -5.50 16 22 C -0.15 -0.20 8.67 -39.56 -0.34 -0.54 16 23 C -0.07 -0.07 10.04 -39.60 -0.40 -0.47 16 24 C -0.20 -0.34 9.04 -39.43 -0.36 -0.70 16 25 C -0.13 0.28 7.43 -25.92 -0.19 0.09 16 26 H 0.06 -0.05 8.13 -51.92 -0.42 -0.47 16 27 H 0.06 -0.05 8.13 -51.93 -0.42 -0.48 16 28 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 29 H 0.11 -0.11 7.44 -51.93 -0.39 -0.50 16 30 H 0.09 -0.29 8.14 -51.93 -0.42 -0.72 16 31 H 0.40 -2.30 8.70 -40.82 -0.36 -2.65 16 32 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 33 H 0.11 -0.43 8.14 -51.93 -0.42 -0.85 16 34 H 0.07 0.02 7.62 -51.93 -0.40 -0.38 16 35 H 0.07 0.04 7.62 -51.93 -0.40 -0.35 16 36 H 0.13 0.30 8.06 -52.48 -0.42 -0.13 16 37 H 0.08 -0.10 7.96 -51.93 -0.41 -0.52 16 38 H 0.38 -0.94 8.74 45.56 0.40 -0.54 16 39 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 40 H -0.26 -0.64 7.04 56.52 0.40 -0.24 16 41 H 0.13 -0.05 4.86 -52.49 -0.26 -0.31 16 42 H 0.13 -0.16 8.06 -52.49 -0.42 -0.59 16 43 H 0.13 0.07 6.30 -52.49 -0.33 -0.27 16 44 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 45 H 0.10 -0.17 8.10 -51.93 -0.42 -0.59 16 LS Contribution 381.28 15.07 5.75 5.75 Total: 0.00 -10.39 381.28 -9.26 -19.65 By element: Atomic # 1 Polarization: -6.71 SS G_CDS: -6.37 Total: -13.08 kcal Atomic # 6 Polarization: 0.39 SS G_CDS: -2.01 Total: -1.62 kcal Atomic # 7 Polarization: 2.09 SS G_CDS: -0.28 Total: 1.81 kcal Atomic # 8 Polarization: -5.74 SS G_CDS: -1.27 Total: -7.01 kcal Atomic # 14 Polarization: -0.42 SS G_CDS: -5.08 Total: -5.50 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -10.39 -9.26 -19.65 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_4549614.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.257 kcal (2) G-P(sol) polarization free energy of solvation -10.389 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.646 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.263 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.651 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.908 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds