Wall clock time and date at job start Tue Mar 9 2021 12:55:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45194 * 1 3 3 C 1.34235 * 117.00100 * 2 1 4 4 O 1.20827 * 119.99365 * 359.97438 * 3 2 1 5 5 C 1.50698 * 120.00286 * 180.02562 * 3 2 1 6 6 H 1.08995 * 112.85147 * 48.79939 * 5 3 2 7 7 C 1.53775 * 113.61417 * 179.97438 * 5 3 2 8 8 C 1.53784 * 87.08390 * 140.06189 * 7 5 3 9 9 H 1.08998 * 113.61976 * 219.93786 * 8 7 5 10 10 N 1.46504 * 113.61208 * 89.11134 * 8 7 5 11 11 C 1.34775 * 119.99616 * 155.00176 * 10 8 7 12 12 O 1.21280 * 120.00294 * 0.02562 * 11 10 8 13 13 C 1.50700 * 119.99970 * 180.02562 * 11 10 8 14 14 O 1.42895 * 109.47427 * 180.02562 * 13 11 10 15 15 C 1.35996 * 117.00028 * 180.02562 * 14 13 11 16 16 C 1.39155 * 120.07034 * 180.02562 * 15 14 13 17 17 O 1.35994 * 120.07385 * 359.69614 * 16 15 14 18 18 C 1.42907 * 117.00165 * 180.02562 * 17 16 15 19 19 C 1.38572 * 119.85350 * 179.97438 * 16 15 14 20 20 C 1.38238 * 119.99411 * 0.02562 * 19 16 15 21 21 C 1.50705 * 119.92000 * 180.02562 * 20 19 16 22 22 O 1.42902 * 109.47034 * 254.99429 * 21 20 19 23 23 Si 1.86292 * 109.47561 * 14.99745 * 21 20 19 24 24 C 1.38245 * 120.15335 * 359.97438 * 20 19 16 25 25 N 1.48005 * 119.93157 * 179.97438 * 24 20 19 26 26 O 1.21795 * 120.00407 * 180.02562 * 25 24 20 27 27 O 1.21797 * 119.99816 * 0.02562 * 25 24 20 28 28 C 1.38247 * 120.14462 * 0.02562 * 24 20 19 29 29 C 1.53779 * 113.68816 * 277.53425 * 5 3 2 30 30 H 1.08996 * 109.47195 * 300.00143 * 1 2 3 31 31 H 1.09000 * 109.47340 * 60.00568 * 1 2 3 32 32 H 1.09007 * 109.47075 * 180.02562 * 1 2 3 33 33 H 1.09002 * 113.61522 * 25.51442 * 7 5 3 34 34 H 1.08997 * 113.69271 * 254.62276 * 7 5 3 35 35 H 0.97003 * 120.00023 * 335.00289 * 10 8 7 36 36 H 1.09007 * 109.46795 * 60.00453 * 13 11 10 37 37 H 1.09000 * 109.47198 * 300.00621 * 13 11 10 38 38 H 1.08991 * 109.47071 * 180.02562 * 18 17 16 39 39 H 1.08998 * 109.46932 * 300.00387 * 18 17 16 40 40 H 1.09002 * 109.46940 * 59.99906 * 18 17 16 41 41 H 1.07998 * 120.00060 * 179.97438 * 19 16 15 42 42 H 1.09003 * 109.47132 * 135.00185 * 21 20 19 43 43 H 0.96698 * 114.00150 * 180.02562 * 22 21 20 44 44 H 1.48506 * 109.99789 * 300.00077 * 23 21 20 45 45 H 1.48501 * 110.00207 * 61.31765 * 23 21 20 46 46 H 1.07996 * 120.00046 * 179.97438 * 28 24 20 47 47 H 1.08997 * 113.61734 * 105.45667 * 29 5 3 48 48 H 1.09003 * 113.61623 * 334.55305 * 29 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2750 -0.0006 6 1 4.0233 0.6366 -0.7566 7 6 4.1076 2.7143 -0.0011 8 6 5.1827 2.2267 0.9845 9 1 5.4001 2.9385 1.7808 10 7 6.3909 1.7179 0.3306 11 6 7.5683 1.7310 0.9863 12 8 7.6276 2.1635 2.1178 13 6 8.8113 1.2082 0.3135 14 8 9.9216 1.3273 1.2052 15 6 11.1286 0.8977 0.7491 16 6 12.2529 0.9834 1.5646 17 8 12.1483 1.5028 2.8171 18 6 13.3440 1.5602 3.5976 19 6 13.4805 0.5438 1.0955 20 6 13.5862 0.0220 -0.1803 21 6 14.9219 -0.4561 -0.6886 22 8 15.4454 0.4939 -1.6189 23 14 16.1013 -0.6395 0.7418 24 6 12.4692 -0.0632 -0.9905 25 7 12.5881 -0.6222 -2.3557 26 8 11.6051 -0.6975 -3.0708 27 8 13.6691 -1.0070 -2.7642 28 6 11.2416 0.3736 -0.5286 29 6 4.1935 1.1226 1.3952 30 1 -0.3633 0.5138 0.8899 31 1 -0.3634 0.5137 -0.8900 32 1 -0.3633 -1.0277 0.0005 33 1 3.4179 3.4404 0.4291 34 1 4.5092 3.0308 -0.9637 35 1 6.3435 1.3716 -0.5743 36 1 9.0064 1.7868 -0.5895 37 1 8.6684 0.1603 0.0498 38 1 13.1210 1.9937 4.5724 39 1 13.7400 0.5534 3.7301 40 1 14.0828 2.1768 3.0857 41 1 14.3546 0.6097 1.7262 42 1 14.7987 -1.4194 -1.1837 43 1 16.3054 0.2503 -1.9879 44 1 16.2779 0.6671 1.4251 45 1 15.5838 -1.6483 1.7008 46 1 10.3707 0.3063 -1.1636 47 1 4.6641 0.1533 1.5590 48 1 3.5272 1.4134 2.2074 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_4549636.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:24 Heat of formation + Delta-G solvation = -142.925315 kcal Electronic energy + Delta-G solvation = -37223.373183 eV Core-core repulsion = 31831.011702 eV Total energy + Delta-G solvation = -5392.361482 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.143 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -43.26299 -42.22287 -42.01622 -41.06727 -40.03509 -39.26085 -38.89360 -37.61135 -37.36716 -37.08138 -34.62485 -32.82761 -32.60949 -30.32239 -29.32483 -28.99349 -27.88179 -27.04443 -26.95450 -25.75531 -24.06726 -23.14156 -22.66812 -22.13362 -20.76942 -20.52912 -19.73383 -19.54140 -19.08362 -18.78932 -18.53496 -18.19462 -18.08567 -17.95884 -17.84944 -17.60167 -17.37557 -17.04016 -16.99384 -16.58187 -16.10538 -15.81659 -15.67397 -15.44420 -15.11655 -14.97492 -14.74325 -14.40175 -14.30781 -14.15948 -14.01601 -13.80320 -13.59440 -13.56246 -13.24186 -13.11562 -12.93168 -12.71846 -12.61983 -12.49634 -12.41190 -12.26498 -12.03167 -11.97256 -11.92026 -11.86450 -11.82625 -11.39099 -11.11143 -10.58831 -10.37631 -10.29779 -9.55894 -5.20300 -1.23191 -0.53184 0.30476 0.40719 1.01140 1.04934 1.10001 1.28718 1.39946 1.65462 1.65505 1.67978 1.83790 2.13790 2.80760 3.02114 3.05392 3.13694 3.18836 3.30359 3.36781 3.46931 3.59630 3.61192 3.61661 3.67273 3.76776 3.83253 3.88274 3.89166 3.91294 4.12435 4.13173 4.20370 4.21413 4.29878 4.33291 4.45223 4.51469 4.56495 4.57244 4.59523 4.63759 4.68335 4.79254 5.23975 5.34009 5.40324 5.45269 5.87823 6.13076 6.53061 6.67845 6.77820 6.89930 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.503 6.503 5 C -0.113 4.113 6 H 0.126 0.874 7 C -0.124 4.124 8 C 0.123 3.877 9 H 0.117 0.883 10 N -0.711 5.711 11 C 0.522 3.478 12 O -0.503 6.503 13 C 0.031 3.969 14 O -0.264 6.264 15 C 0.110 3.890 16 C 0.171 3.829 17 O -0.283 6.283 18 C 0.015 3.985 19 C -0.186 4.186 20 C 0.007 3.993 21 C -0.082 4.082 22 O -0.534 6.534 23 Si 0.688 3.312 24 C -0.024 4.024 25 N 0.036 4.964 26 O -0.174 6.174 27 O -0.132 6.132 28 C -0.117 4.117 29 C -0.132 4.132 30 H 0.064 0.936 31 H 0.064 0.936 32 H 0.103 0.897 33 H 0.114 0.886 34 H 0.088 0.912 35 H 0.405 0.595 36 H 0.102 0.898 37 H 0.102 0.898 38 H 0.117 0.883 39 H 0.061 0.939 40 H 0.063 0.937 41 H 0.157 0.843 42 H 0.102 0.898 43 H 0.390 0.610 44 H -0.248 1.248 45 H -0.250 1.250 46 H 0.169 0.831 47 H 0.088 0.912 48 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.838 -3.039 0.393 4.177 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.390 6.390 5 C -0.132 4.132 6 H 0.144 0.856 7 C -0.162 4.162 8 C 0.018 3.982 9 H 0.135 0.865 10 N -0.365 5.365 11 C 0.307 3.693 12 O -0.376 6.376 13 C -0.048 4.048 14 O -0.176 6.176 15 C 0.063 3.937 16 C 0.122 3.878 17 O -0.194 6.194 18 C -0.079 4.079 19 C -0.205 4.205 20 C 0.005 3.995 21 C -0.193 4.193 22 O -0.341 6.341 23 Si 0.588 3.412 24 C -0.108 4.108 25 N 0.555 4.445 26 O -0.384 6.384 27 O -0.352 6.352 28 C -0.136 4.136 29 C -0.170 4.170 30 H 0.083 0.917 31 H 0.083 0.917 32 H 0.122 0.878 33 H 0.133 0.867 34 H 0.106 0.894 35 H 0.240 0.760 36 H 0.120 0.880 37 H 0.119 0.881 38 H 0.135 0.865 39 H 0.079 0.921 40 H 0.082 0.918 41 H 0.174 0.826 42 H 0.119 0.881 43 H 0.239 0.761 44 H -0.172 1.172 45 H -0.174 1.174 46 H 0.186 0.814 47 H 0.107 0.893 48 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 1.878 -1.599 3.222 4.058 hybrid contribution -0.667 -0.480 -1.366 1.594 sum 1.211 -2.078 1.856 3.038 Atomic orbital electron populations 1.23331 0.75870 1.04052 1.02753 1.86517 1.23795 1.33321 1.83780 1.23535 0.91639 0.81461 0.72168 1.90694 1.66949 1.36428 1.44946 1.22658 0.87793 1.01003 1.01775 0.85619 1.23369 0.96834 0.94904 1.01064 1.21835 0.83104 0.96515 0.96729 0.86522 1.45466 1.07037 1.65219 1.18753 1.19841 0.83815 0.79053 0.86615 1.90819 1.85289 1.43884 1.17611 1.22658 0.85109 1.03488 0.93520 1.86330 1.12901 1.78553 1.39828 1.17794 0.85307 0.99615 0.91034 1.18407 0.90812 0.92956 0.85584 1.86335 1.35554 1.75657 1.21882 1.23384 0.86052 1.02378 0.96132 1.20941 0.97188 1.05478 0.96902 1.18947 0.93872 0.94608 0.92096 1.24877 0.95454 0.96334 1.02621 1.86435 1.40762 1.45529 1.61385 0.94592 0.88199 0.81234 0.77191 1.20365 0.95528 1.10154 0.84794 1.43250 1.00466 0.98627 1.02117 1.94543 1.29130 1.60602 1.54165 1.94496 1.14984 1.49194 1.76562 1.20790 0.98149 0.99648 0.95049 1.23411 0.97764 1.01125 0.94743 0.91721 0.91698 0.87821 0.86742 0.89384 0.75990 0.88023 0.88054 0.86510 0.92057 0.91800 0.82568 0.88081 0.76139 1.17240 1.17389 0.81408 0.89323 0.88114 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.33 10.57 -39.27 -0.41 -0.74 16 3 C 0.47 0.49 7.49 36.00 0.27 0.76 16 4 O -0.50 -2.00 15.65 -18.75 -0.29 -2.29 16 5 C -0.11 0.26 4.13 -90.96 -0.38 -0.12 16 6 H 0.13 -0.56 8.14 -51.93 -0.42 -0.98 16 7 C -0.12 0.31 7.15 -25.92 -0.19 0.13 16 8 C 0.12 -0.25 4.33 -67.09 -0.29 -0.54 16 9 H 0.12 -0.03 7.46 -51.93 -0.39 -0.42 16 10 N -0.71 2.13 5.26 -52.99 -0.28 1.85 16 11 C 0.52 0.07 7.91 -10.99 -0.09 -0.02 16 12 O -0.50 -2.61 16.10 -14.35 -0.23 -2.84 16 13 C 0.03 -0.06 5.22 36.01 0.19 0.13 16 14 O -0.26 -0.55 9.45 -47.35 -0.45 -1.00 16 15 C 0.11 0.17 6.70 -39.12 -0.26 -0.09 16 16 C 0.17 0.31 6.70 -39.12 -0.26 0.05 16 17 O -0.28 -0.58 10.28 -34.22 -0.35 -0.93 16 18 C 0.02 -0.03 9.81 101.05 0.99 0.97 16 19 C -0.19 -0.18 7.64 -39.46 -0.30 -0.49 16 20 C 0.01 0.01 5.29 -104.62 -0.55 -0.54 16 21 C -0.08 0.01 1.73 36.01 0.06 0.08 16 22 O -0.53 -0.09 11.77 -55.48 -0.65 -0.75 16 23 Si 0.69 -1.65 30.19 -169.99 -5.13 -6.78 16 24 C -0.02 -0.06 6.85 -79.95 -0.55 -0.61 16 25 N 0.04 0.15 4.45 33.96 0.15 0.30 16 26 O -0.17 -0.80 18.44 -29.46 -0.54 -1.34 16 27 O -0.13 -0.56 14.62 -35.96 -0.53 -1.09 16 28 C -0.12 -0.08 8.54 -39.46 -0.34 -0.41 16 29 C -0.13 0.29 7.43 -25.90 -0.19 0.09 16 30 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 31 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 32 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 33 H 0.11 -0.13 7.44 -51.93 -0.39 -0.52 16 34 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 35 H 0.41 -2.51 8.70 -40.82 -0.36 -2.87 16 36 H 0.10 -0.45 7.66 -51.93 -0.40 -0.85 16 37 H 0.10 -0.48 7.67 -51.93 -0.40 -0.88 16 38 H 0.12 -0.39 8.14 -51.93 -0.42 -0.81 16 39 H 0.06 -0.17 7.67 -51.93 -0.40 -0.57 16 40 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 41 H 0.16 -0.08 3.13 -52.49 -0.16 -0.24 16 42 H 0.10 -0.05 6.07 -51.93 -0.32 -0.37 16 43 H 0.39 -1.83 8.74 45.56 0.40 -1.43 16 44 H -0.25 0.15 6.74 56.52 0.38 0.53 16 45 H -0.25 0.08 7.11 56.52 0.40 0.48 16 46 H 0.17 -0.32 5.85 -52.49 -0.31 -0.63 16 47 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 48 H 0.10 -0.18 8.10 -51.93 -0.42 -0.60 16 LS Contribution 411.24 15.07 6.20 6.20 Total: 0.00 -13.71 411.24 -9.05 -22.76 By element: Atomic # 1 Polarization: -8.07 SS G_CDS: -5.71 Total: -13.77 kcal Atomic # 6 Polarization: 1.24 SS G_CDS: -0.82 Total: 0.43 kcal Atomic # 7 Polarization: 2.28 SS G_CDS: -0.13 Total: 2.15 kcal Atomic # 8 Polarization: -7.52 SS G_CDS: -3.46 Total: -10.98 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.13 Total: -6.78 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -13.71 -9.05 -22.76 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_4549636.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.169 kcal (2) G-P(sol) polarization free energy of solvation -13.711 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.880 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.045 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.756 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.925 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds