Wall clock time and date at job start Tue Mar 9 2021 12:55:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45194 * 1 3 3 C 1.34235 * 117.00100 * 2 1 4 4 O 1.20827 * 119.99365 * 359.97438 * 3 2 1 5 5 C 1.50698 * 120.00286 * 180.02562 * 3 2 1 6 6 H 1.08995 * 112.85147 * 48.79939 * 5 3 2 7 7 C 1.53775 * 113.61417 * 179.97438 * 5 3 2 8 8 C 1.53784 * 87.08390 * 140.06189 * 7 5 3 9 9 H 1.08998 * 113.61976 * 219.93786 * 8 7 5 10 10 N 1.46504 * 113.61208 * 89.11134 * 8 7 5 11 11 C 1.34775 * 119.99616 * 155.00176 * 10 8 7 12 12 O 1.21280 * 120.00294 * 0.02562 * 11 10 8 13 13 C 1.50700 * 119.99970 * 180.02562 * 11 10 8 14 14 O 1.42895 * 109.47427 * 180.02562 * 13 11 10 15 15 C 1.35996 * 117.00028 * 180.02562 * 14 13 11 16 16 C 1.39155 * 120.07034 * 180.02562 * 15 14 13 17 17 O 1.35994 * 120.07385 * 359.69614 * 16 15 14 18 18 C 1.42907 * 117.00165 * 180.02562 * 17 16 15 19 19 C 1.38572 * 119.85350 * 179.97438 * 16 15 14 20 20 C 1.38238 * 119.99411 * 0.02562 * 19 16 15 21 21 C 1.50705 * 119.92000 * 180.02562 * 20 19 16 22 22 O 1.42902 * 109.47034 * 254.99429 * 21 20 19 23 23 Si 1.86292 * 109.47561 * 14.99745 * 21 20 19 24 24 C 1.38245 * 120.15335 * 359.97438 * 20 19 16 25 25 N 1.48005 * 119.93157 * 179.97438 * 24 20 19 26 26 O 1.21795 * 120.00407 * 180.02562 * 25 24 20 27 27 O 1.21797 * 119.99816 * 0.02562 * 25 24 20 28 28 C 1.38247 * 120.14462 * 0.02562 * 24 20 19 29 29 C 1.53779 * 113.68816 * 277.53425 * 5 3 2 30 30 H 1.08996 * 109.47195 * 300.00143 * 1 2 3 31 31 H 1.09000 * 109.47340 * 60.00568 * 1 2 3 32 32 H 1.09007 * 109.47075 * 180.02562 * 1 2 3 33 33 H 1.09002 * 113.61522 * 25.51442 * 7 5 3 34 34 H 1.08997 * 113.69271 * 254.62276 * 7 5 3 35 35 H 0.97003 * 120.00023 * 335.00289 * 10 8 7 36 36 H 1.09007 * 109.46795 * 60.00453 * 13 11 10 37 37 H 1.09000 * 109.47198 * 300.00621 * 13 11 10 38 38 H 1.08991 * 109.47071 * 180.02562 * 18 17 16 39 39 H 1.08998 * 109.46932 * 300.00387 * 18 17 16 40 40 H 1.09002 * 109.46940 * 59.99906 * 18 17 16 41 41 H 1.07998 * 120.00060 * 179.97438 * 19 16 15 42 42 H 1.09003 * 109.47132 * 135.00185 * 21 20 19 43 43 H 0.96698 * 114.00150 * 180.02562 * 22 21 20 44 44 H 1.48506 * 109.99789 * 300.00077 * 23 21 20 45 45 H 1.48501 * 110.00207 * 61.31765 * 23 21 20 46 46 H 1.07996 * 120.00046 * 179.97438 * 28 24 20 47 47 H 1.08997 * 113.61734 * 105.45667 * 29 5 3 48 48 H 1.09003 * 113.61623 * 334.55305 * 29 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2750 -0.0006 6 1 4.0233 0.6366 -0.7566 7 6 4.1076 2.7143 -0.0011 8 6 5.1827 2.2267 0.9845 9 1 5.4001 2.9385 1.7808 10 7 6.3909 1.7179 0.3306 11 6 7.5683 1.7310 0.9863 12 8 7.6276 2.1635 2.1178 13 6 8.8113 1.2082 0.3135 14 8 9.9216 1.3273 1.2052 15 6 11.1286 0.8977 0.7491 16 6 12.2529 0.9834 1.5646 17 8 12.1483 1.5028 2.8171 18 6 13.3440 1.5602 3.5976 19 6 13.4805 0.5438 1.0955 20 6 13.5862 0.0220 -0.1803 21 6 14.9219 -0.4561 -0.6886 22 8 15.4454 0.4939 -1.6189 23 14 16.1013 -0.6395 0.7418 24 6 12.4692 -0.0632 -0.9905 25 7 12.5881 -0.6222 -2.3557 26 8 11.6051 -0.6975 -3.0708 27 8 13.6691 -1.0070 -2.7642 28 6 11.2416 0.3736 -0.5286 29 6 4.1935 1.1226 1.3952 30 1 -0.3633 0.5138 0.8899 31 1 -0.3634 0.5137 -0.8900 32 1 -0.3633 -1.0277 0.0005 33 1 3.4179 3.4404 0.4291 34 1 4.5092 3.0308 -0.9637 35 1 6.3435 1.3716 -0.5743 36 1 9.0064 1.7868 -0.5895 37 1 8.6684 0.1603 0.0498 38 1 13.1210 1.9937 4.5724 39 1 13.7400 0.5534 3.7301 40 1 14.0828 2.1768 3.0857 41 1 14.3546 0.6097 1.7262 42 1 14.7987 -1.4194 -1.1837 43 1 16.3054 0.2503 -1.9879 44 1 16.2779 0.6671 1.4251 45 1 15.5838 -1.6483 1.7008 46 1 10.3707 0.3063 -1.1636 47 1 4.6641 0.1533 1.5590 48 1 3.5272 1.4134 2.2074 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12121848_4549636.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:23 Heat of formation + Delta-G solvation = -146.054826 kcal Electronic energy + Delta-G solvation = -37223.508889 eV Core-core repulsion = 31831.011702 eV Total energy + Delta-G solvation = -5392.497187 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.143 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -43.44793 -42.25395 -42.03707 -41.09390 -40.02115 -39.27774 -38.91030 -37.78385 -37.47387 -37.12239 -34.59328 -32.85175 -32.65674 -30.25426 -29.27374 -28.91060 -27.96313 -26.90557 -26.85302 -25.78516 -24.10357 -23.21348 -22.65760 -22.08852 -20.83019 -20.47489 -19.91477 -19.58154 -19.09080 -18.88292 -18.57072 -18.25954 -18.10025 -17.98709 -17.81012 -17.59857 -17.39576 -16.99649 -16.90899 -16.55469 -16.06160 -15.77541 -15.64775 -15.40373 -15.09696 -14.91386 -14.71998 -14.36139 -14.29736 -14.13038 -13.96749 -13.73521 -13.56222 -13.49472 -13.17300 -13.00941 -12.89270 -12.70771 -12.67045 -12.51055 -12.43626 -12.38668 -12.20507 -11.91449 -11.90832 -11.86291 -11.79676 -11.42339 -11.16263 -10.62069 -10.29348 -10.23434 -9.60332 -5.00527 -1.38852 -0.56035 0.12145 0.24308 1.03850 1.13788 1.15428 1.32551 1.57420 1.70816 1.71348 1.78430 1.80795 2.23078 2.82790 3.04337 3.18917 3.20703 3.28350 3.33949 3.42566 3.61744 3.73293 3.73629 3.77850 3.82053 3.93952 3.94585 3.99976 4.04179 4.07681 4.11663 4.23486 4.23854 4.26396 4.44674 4.50944 4.58167 4.60016 4.61502 4.64873 4.67559 4.76162 4.85513 4.95005 5.24138 5.32493 5.36518 5.46631 5.90144 6.32972 6.51199 6.62767 6.84392 7.02365 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.467 3.533 4 O -0.539 6.539 5 C -0.105 4.105 6 H 0.157 0.843 7 C -0.117 4.117 8 C 0.124 3.876 9 H 0.095 0.905 10 N -0.690 5.690 11 C 0.522 3.478 12 O -0.564 6.564 13 C 0.024 3.976 14 O -0.290 6.290 15 C 0.105 3.895 16 C 0.163 3.837 17 O -0.304 6.304 18 C 0.004 3.996 19 C -0.188 4.188 20 C -0.005 4.005 21 C -0.100 4.100 22 O -0.553 6.553 23 Si 0.777 3.223 24 C -0.043 4.043 25 N 0.036 4.964 26 O -0.189 6.189 27 O -0.142 6.142 28 C -0.106 4.106 29 C -0.129 4.129 30 H 0.059 0.941 31 H 0.062 0.938 32 H 0.128 0.872 33 H 0.098 0.902 34 H 0.106 0.894 35 H 0.425 0.575 36 H 0.132 0.868 37 H 0.135 0.865 38 H 0.131 0.869 39 H 0.072 0.928 40 H 0.072 0.928 41 H 0.168 0.832 42 H 0.101 0.899 43 H 0.408 0.592 44 H -0.269 1.269 45 H -0.277 1.277 46 H 0.193 0.807 47 H 0.094 0.906 48 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.600 -3.913 -0.484 5.339 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.280 6.280 3 C 0.311 3.689 4 O -0.429 6.429 5 C -0.124 4.124 6 H 0.174 0.826 7 C -0.155 4.155 8 C 0.018 3.982 9 H 0.113 0.887 10 N -0.345 5.345 11 C 0.308 3.692 12 O -0.441 6.441 13 C -0.053 4.053 14 O -0.203 6.203 15 C 0.058 3.942 16 C 0.114 3.886 17 O -0.216 6.216 18 C -0.089 4.089 19 C -0.207 4.207 20 C -0.007 4.007 21 C -0.208 4.208 22 O -0.364 6.364 23 Si 0.678 3.322 24 C -0.127 4.127 25 N 0.552 4.448 26 O -0.397 6.397 27 O -0.362 6.362 28 C -0.125 4.125 29 C -0.168 4.168 30 H 0.078 0.922 31 H 0.080 0.920 32 H 0.146 0.854 33 H 0.116 0.884 34 H 0.124 0.876 35 H 0.263 0.737 36 H 0.149 0.851 37 H 0.152 0.848 38 H 0.149 0.851 39 H 0.091 0.909 40 H 0.090 0.910 41 H 0.185 0.815 42 H 0.119 0.881 43 H 0.260 0.740 44 H -0.195 1.195 45 H -0.203 1.203 46 H 0.210 0.790 47 H 0.113 0.887 48 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 2.626 -2.507 2.251 4.272 hybrid contribution -0.974 -0.192 -1.049 1.444 sum 1.652 -2.699 1.202 3.385 Atomic orbital electron populations 1.23517 0.75160 1.05579 1.02399 1.86520 1.24679 1.33277 1.83485 1.24177 0.92799 0.80954 0.70935 1.90678 1.67979 1.37491 1.46722 1.22812 0.85638 1.01566 1.02335 0.82564 1.23290 0.96050 0.94614 1.01544 1.21714 0.83473 0.96390 0.96624 0.88700 1.45291 1.05872 1.63991 1.19318 1.20275 0.84947 0.78059 0.85934 1.90799 1.86206 1.46820 1.20269 1.22982 0.83039 1.05896 0.93404 1.86297 1.13695 1.78827 1.41461 1.17848 0.85277 0.99879 0.91243 1.18673 0.91351 0.92843 0.85731 1.86312 1.37445 1.75667 1.22177 1.23666 0.85354 1.03472 0.96449 1.21043 0.97420 1.05369 0.96823 1.19310 0.94767 0.94328 0.92272 1.25219 0.95576 0.96011 1.04003 1.86384 1.42286 1.45933 1.61759 0.93535 0.86134 0.78450 0.74060 1.20536 0.96635 1.11435 0.84089 1.43446 1.00237 0.98434 1.02652 1.94518 1.29193 1.61183 1.54835 1.94481 1.15088 1.49599 1.77042 1.20984 0.98384 0.98324 0.94837 1.23373 0.97446 1.01210 0.94726 0.92229 0.91961 0.85397 0.88382 0.87568 0.73664 0.85076 0.84790 0.85094 0.90911 0.90967 0.81490 0.88126 0.73979 1.19548 1.20304 0.78990 0.88698 0.89025 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.15 16 2 O -0.36 -0.61 10.57 -51.46 -0.54 -1.15 16 3 C 0.47 1.06 7.49 71.24 0.53 1.60 16 4 O -0.54 -4.85 15.65 21.96 0.34 -4.51 16 5 C -0.10 0.56 4.13 -11.02 -0.05 0.52 16 6 H 0.16 -1.80 8.14 -2.39 -0.02 -1.82 16 7 C -0.12 0.61 7.15 31.12 0.22 0.83 16 8 C 0.12 -0.47 4.33 45.53 0.20 -0.27 16 9 H 0.09 0.13 7.46 -2.39 -0.02 0.11 16 10 N -0.69 4.81 5.26 -439.96 -2.32 2.50 16 11 C 0.52 0.07 7.91 87.66 0.69 0.76 16 12 O -0.56 -6.71 16.10 16.01 0.26 -6.45 16 13 C 0.02 -0.12 5.22 71.24 0.37 0.25 16 14 O -0.29 -1.23 9.45 -67.09 -0.63 -1.87 16 15 C 0.10 0.32 6.70 22.57 0.15 0.47 16 16 C 0.16 0.67 6.70 22.57 0.15 0.82 16 17 O -0.30 -1.46 10.28 -79.62 -0.82 -2.28 16 18 C 0.00 -0.01 9.81 113.37 1.11 1.10 16 19 C -0.19 -0.41 7.64 22.35 0.17 -0.24 16 20 C 0.00 -0.02 5.29 -19.86 -0.11 -0.12 16 21 C -0.10 0.04 1.73 71.24 0.12 0.16 16 22 O -0.55 -0.12 11.77 -129.62 -1.53 -1.64 16 23 Si 0.78 -4.19 30.19 68.60 2.07 -2.12 16 24 C -0.04 -0.21 6.85 36.38 0.25 0.04 16 25 N 0.04 0.30 4.45 -46.46 -0.21 0.09 16 26 O -0.19 -1.71 18.44 18.89 0.35 -1.36 16 27 O -0.14 -1.27 14.62 25.11 0.37 -0.90 16 28 C -0.11 -0.07 8.54 22.35 0.19 0.12 16 29 C -0.13 0.55 7.43 31.13 0.23 0.78 16 30 H 0.06 -0.04 8.13 -2.39 -0.02 -0.06 16 31 H 0.06 -0.07 8.13 -2.39 -0.02 -0.09 16 32 H 0.13 -0.90 8.14 -2.38 -0.02 -0.92 16 33 H 0.10 -0.12 7.44 -2.39 -0.02 -0.14 16 34 H 0.11 -0.93 8.14 -2.39 -0.02 -0.95 16 35 H 0.42 -6.28 8.70 -92.71 -0.81 -7.09 16 36 H 0.13 -1.46 7.66 -2.38 -0.02 -1.48 16 37 H 0.13 -1.58 7.67 -2.39 -0.02 -1.60 16 38 H 0.13 -0.88 8.14 -2.39 -0.02 -0.89 16 39 H 0.07 -0.42 7.67 -2.39 -0.02 -0.44 16 40 H 0.07 -0.37 7.66 -2.39 -0.02 -0.39 16 41 H 0.17 -0.18 3.13 -2.91 -0.01 -0.19 16 42 H 0.10 -0.08 6.07 -2.39 -0.01 -0.10 16 43 H 0.41 -3.99 8.74 -74.06 -0.65 -4.64 16 44 H -0.27 0.52 6.74 99.48 0.67 1.19 16 45 H -0.28 0.27 7.11 99.48 0.71 0.98 16 46 H 0.19 -1.07 5.85 -2.91 -0.02 -1.09 16 47 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 48 H 0.09 -0.21 8.10 -2.39 -0.02 -0.23 16 Total: 0.00 -34.47 411.24 2.41 -32.06 By element: Atomic # 1 Polarization: -19.96 SS G_CDS: -0.38 Total: -20.35 kcal Atomic # 6 Polarization: 2.53 SS G_CDS: 5.44 Total: 7.98 kcal Atomic # 7 Polarization: 5.12 SS G_CDS: -2.52 Total: 2.59 kcal Atomic # 8 Polarization: -17.96 SS G_CDS: -2.21 Total: -20.16 kcal Atomic # 14 Polarization: -4.19 SS G_CDS: 2.07 Total: -2.12 kcal Total: -34.47 2.41 -32.06 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_4549636.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -113.996 kcal (2) G-P(sol) polarization free energy of solvation -34.466 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.462 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.407 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.059 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.055 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds